RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 TRAPPC8Q9Y2L5 1435 aa10.52□□□□□ -0.73
CXCR4-202ENST00000409817 SPAG9O60271 1321 aaKnown RBP10.52□□□□□ -0.73
CXCR4-202ENST00000409817 UHRF1BP1Q6BDS2 1440 aa10.51□□□□□ -0.73
CXCR4-202ENST00000409817 ZFYVE16Q7Z3T8 1539 aa10.51□□□□□ -0.73
CXCR4-202ENST00000409817 CFAP74Q9C0B2 1584 aa10.51□□□□□ -0.73
CXCR4-202ENST00000409817 DDX10Q13206 875 aaKnown RBP10.51□□□□□ -0.73
CXCR4-202ENST00000409817 ATP10AO60312 1499 aa10.5□□□□□ -0.73
CXCR4-202ENST00000409817 ZNF579Q8NAF0 562 aaKnown RBP10.5□□□□□ -0.73
CXCR4-202ENST00000409817 MFRPQ9BY79 579 aa10.5□□□□□ -0.73
CXCR4-202ENST00000409817 INO80Q9ULG1 1556 aaPredicted RBP10.5□□□□□ -0.73
CXCR4-202ENST00000409817 HSPA5P11021 654 aaKnown RBP10.49□□□□□ -0.73
CXCR4-202ENST00000409817 PSEN1P49768 467 aa10.49□□□□□ -0.73
CXCR4-202ENST00000409817 ADGRL1O94910 1474 aa10.49□□□□□ -0.73
CXCR4-202ENST00000409817 ATP7AQ04656 1500 aa10.48□□□□□ -0.73
CXCR4-202ENST00000409817 CCDC144AA2RUR9 1427 aa10.48□□□□□ -0.73
CXCR4-202ENST00000409817 NBPF8Q3BBV2 869 aa10.48□□□□□ -0.73
CXCR4-202ENST00000409817 IFNL1Q8IU54 200 aa10.48□□□□□ -0.73
CXCR4-202ENST00000409817 SPATA31E1Q6ZUB1 1445 aa10.48□□□□□ -0.73
CXCR4-202ENST00000409817 EIF2AK4Q9P2K8 1649 aaKnown RBP10.47□□□□□ -0.73
CXCR4-202ENST00000409817 CCER2I3L3R5 266 aa10.47□□□□□ -0.73
CXCR4-202ENST00000409817 SCAPERQ9BY12 1400 aa10.47□□□□□ -0.73
CXCR4-202ENST00000409817 RALGAPBQ86X10 1494 aa10.47□□□□□ -0.73
CXCR4-202ENST00000409817 DEPDC5O75140 1603 aa10.47□□□□□ -0.73
CXCR4-202ENST00000409817 ANP32CO43423 234 aa10.47□□□□□ -0.73
CXCR4-202ENST00000409817 ZNF518AQ6AHZ1 1483 aa10.46□□□□□ -0.73
CXCR4-202ENST00000409817 POLR1AO95602 1720 aaPredicted RBP10.46□□□□□ -0.74
CXCR4-202ENST00000409817 HIRIP3Q9BW71 556 aaPredicted RBP10.46□□□□□ -0.74
CXCR4-202ENST00000409817 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
CXCR4-202ENST00000409817 AFAP1Q8N556 730 aa10.45□□□□□ -0.74
CXCR4-202ENST00000409817 CD109Q6YHK3 1445 aa10.45□□□□□ -0.74
CXCR4-202ENST00000409817 MAP3K13O43283 966 aa10.44□□□□□ -0.74
CXCR4-202ENST00000409817 YTHDC1Q96MU7 727 aaKnown RBP10.44□□□□□ -0.74
CXCR4-202ENST00000409817 ARID4BQ4LE39 1312 aaPredicted RBP10.44□□□□□ -0.74
CXCR4-202ENST00000409817 KIF12Q96FN5 646 aa10.44□□□□□ -0.74
CXCR4-202ENST00000409817 WASHC2AQ641Q2 1341 aa10.44□□□□□ -0.74
CXCR4-202ENST00000409817 KANK1Q14678 1352 aa10.44□□□□□ -0.74
CXCR4-202ENST00000409817 DHX29Q7Z478 1369 aaKnown RBP10.44□□□□□ -0.74
CXCR4-202ENST00000409817 PLA2R1Q13018 1463 aa10.43□□□□□ -0.74
CXCR4-202ENST00000409817 NEO1Q92859 1461 aa10.43□□□□□ -0.74
CXCR4-202ENST00000409817 CHRDL2Q6WN34 429 aa10.43□□□□□ -0.74
CXCR4-202ENST00000409817 KDM5CP41229 1560 aa10.43□□□□□ -0.74
CXCR4-202ENST00000409817 VWDEQ8N2E2 1590 aa10.43□□□□□ -0.74
CXCR4-202ENST00000409817 CCDC7Q96M83 1385 aa10.42□□□□□ -0.74
CXCR4-202ENST00000409817 TET3O43151 1660 aa10.42□□□□□ -0.74
CXCR4-202ENST00000409817 FBXO22Q8NEZ5 403 aa10.42□□□□□ -0.74
CXCR4-202ENST00000409817 STAC3Q96MF2 364 aa10.42□□□□□ -0.74
CXCR4-202ENST00000409817 CNTLNQ9NXG0 1405 aa10.42□□□□□ -0.74
CXCR4-202ENST00000409817 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
CXCR4-202ENST00000409817 PRDM15P57071 1507 aaPredicted RBP10.42□□□□□ -0.74
CXCR4-202ENST00000409817 PPP1R37O75864 691 aa10.41□□□□□ -0.74
CXCR4-202ENST00000409817 USP47Q96K76 1375 aa10.41□□□□□ -0.74
CXCR4-202ENST00000409817 POGZQ7Z3K3 1410 aa10.41□□□□□ -0.74
CXCR4-202ENST00000409817 TRPM2O94759 1503 aa10.4□□□□□ -0.74
CXCR4-202ENST00000409817 KCNV2Q8TDN2 545 aa10.4□□□□□ -0.74
CXCR4-202ENST00000409817 KIDINS220Q9ULH0 1771 aa10.4□□□□□ -0.74
CXCR4-202ENST00000409817 NEURL4Q96JN8 1562 aa10.4□□□□□ -0.74
CXCR4-202ENST00000409817 PTPRTO14522 1441 aa10.4□□□□□ -0.74
CXCR4-202ENST00000409817 GLI2P10070 1586 aa10.39□□□□□ -0.75
CXCR4-202ENST00000409817 PRAG1Q86YV5 1406 aa10.39□□□□□ -0.75
CXCR4-202ENST00000409817 EFCAB3Q8N7B9 438 aa10.39□□□□□ -0.75
CXCR4-202ENST00000409817 DCAF11Q8TEB1 546 aa10.39□□□□□ -0.75
CXCR4-202ENST00000409817 E9PCH4 1651 aa10.39□□□□□ -0.75
CXCR4-202ENST00000409817 LAMC1P11047 1609 aa10.39□□□□□ -0.75
CXCR4-202ENST00000409817 HECW2Q9P2P5 1572 aa10.38□□□□□ -0.75
CXCR4-202ENST00000409817 LMTK2Q8IWU2 1503 aa10.38□□□□□ -0.75
CXCR4-202ENST00000409817 SPHKAPQ2M3C7 1700 aa10.38□□□□□ -0.75
CXCR4-202ENST00000409817 BCORL1Q5H9F3 1711 aa10.38□□□□□ -0.75
CXCR4-202ENST00000409817 ROCK2O75116 1388 aaKnown RBP10.38□□□□□ -0.75
CXCR4-202ENST00000409817 GPRASP1Q5JY77 1395 aa10.38□□□□□ -0.75
CXCR4-202ENST00000409817 RNF17Q9BXT8 1623 aaKnown RBP10.38□□□□□ -0.75
CXCR4-202ENST00000409817 PAK3O75914 559 aaPredicted RBP10.38□□□□□ -0.75
CXCR4-202ENST00000409817 CARD11Q9BXL7 1154 aa10.38□□□□□ -0.75
CXCR4-202ENST00000409817 A2MP01023 1474 aa10.37□□□□□ -0.75
CXCR4-202ENST00000409817 TRPM1Q7Z4N2 1603 aa10.37□□□□□ -0.75
CXCR4-202ENST00000409817 KIF7Q2M1P5 1343 aa10.37□□□□□ -0.75
CXCR4-202ENST00000409817 ZNF326Q5BKZ1 582 aaKnown RBP10.37□□□□□ -0.75
CXCR4-202ENST00000409817 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
CXCR4-202ENST00000409817 MROH1Q8NDA8 1641 aa10.37□□□□□ -0.75
CXCR4-202ENST00000409817 MAP3K4Q9Y6R4 1608 aa10.37□□□□□ -0.75
CXCR4-202ENST00000409817 KIF3BO15066 747 aa10.36□□□□□ -0.75
CXCR4-202ENST00000409817 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
CXCR4-202ENST00000409817 CEP152O94986 1710 aa10.36□□□□□ -0.75
CXCR4-202ENST00000409817 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
CXCR4-202ENST00000409817 RIMBP3CA6NJZ7 1639 aa10.35□□□□□ -0.75
CXCR4-202ENST00000409817 RIMBP3BA6NNM3 1639 aa10.35□□□□□ -0.75
CXCR4-202ENST00000409817 RIMBP3Q9UFD9 1639 aa10.35□□□□□ -0.75
CXCR4-202ENST00000409817 C11orf95C9JLR9 678 aaPredicted RBP10.35□□□□□ -0.75
CXCR4-202ENST00000409817 GTF3C3Q9Y5Q9 886 aa10.35□□□□□ -0.75
CXCR4-202ENST00000409817 EFCAB6Q5THR3 1501 aa10.35□□□□□ -0.75
CXCR4-202ENST00000409817 RGL3Q3MIN7 710 aa10.32□□□□□ -0.76
CXCR4-202ENST00000409817 PHF12Q96QT6 1004 aa10.32□□□□□ -0.76
CXCR4-202ENST00000409817 CLTCL1P53675 1640 aa10.32□□□□□ -0.76
CXCR4-202ENST00000409817 FRMPD1Q5SYB0 1578 aa10.32□□□□□ -0.76
CXCR4-202ENST00000409817 SOX12O15370 315 aa10.32□□□□□ -0.76
CXCR4-202ENST00000409817 NLRP6P59044 892 aa10.32□□□□□ -0.76
CXCR4-202ENST00000409817 CYB5RLQ6IPT4 315 aa10.32□□□□□ -0.76
CXCR4-202ENST00000409817 WDR70Q9NW82 654 aa10.32□□□□□ -0.76
CXCR4-202ENST00000409817 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
CXCR4-202ENST00000409817 PRKRIP1Q9H875 184 aaPredicted RBP10.31□□□□□ -0.76
CXCR4-202ENST00000409817 RICTORQ6R327 1708 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms