RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 NRXN1Q9ULB1 1477 aa18.85■□□□□ 0.61
LIMS2-203ENST00000409254 TMEM2Q9UHN6 1383 aa18.85■□□□□ 0.61
LIMS2-203ENST00000409254 THEMISQ8N1K5 641 aaPredicted RBP18.85■□□□□ 0.61
LIMS2-203ENST00000409254 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.6
LIMS2-203ENST00000409254 DIP2AQ14689 1571 aa18.82■□□□□ 0.6
LIMS2-203ENST00000409254 SETBP1Q9Y6X0 1596 aa18.82■□□□□ 0.6
LIMS2-203ENST00000409254 HDGFP51858 240 aaKnown RBP18.82■□□□□ 0.6
LIMS2-203ENST00000409254 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
LIMS2-203ENST00000409254 RIMS2Q9UQ26 1411 aa18.82■□□□□ 0.6
LIMS2-203ENST00000409254 SIN3AQ96ST3 1273 aa18.81■□□□□ 0.6
LIMS2-203ENST00000409254 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
LIMS2-203ENST00000409254 MED14O60244 1454 aa18.8■□□□□ 0.6
LIMS2-203ENST00000409254 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
LIMS2-203ENST00000409254 SETD1AO15047 1707 aaKnown RBP18.79■□□□□ 0.6
LIMS2-203ENST00000409254 IQGAP1P46940 1657 aa18.79■□□□□ 0.6
LIMS2-203ENST00000409254 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
LIMS2-203ENST00000409254 NRXN3Q9Y4C0 1643 aa18.78■□□□□ 0.6
LIMS2-203ENST00000409254 PIK3C2GO75747 1445 aa18.77■□□□□ 0.6
LIMS2-203ENST00000409254 VGFO15240 615 aaPredicted RBP18.77■□□□□ 0.6
LIMS2-203ENST00000409254 STRCQ7RTU9 1775 aa18.77■□□□□ 0.6
LIMS2-203ENST00000409254 PRAG1Q86YV5 1406 aa18.76■□□□□ 0.59
LIMS2-203ENST00000409254 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
LIMS2-203ENST00000409254 PLEKHG1Q9ULL1 1385 aa18.76■□□□□ 0.59
LIMS2-203ENST00000409254 CHGAP10645 457 aaKnown RBP18.75■□□□□ 0.59
LIMS2-203ENST00000409254 ZNF326Q5BKZ1 582 aaKnown RBP18.75■□□□□ 0.59
LIMS2-203ENST00000409254 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
LIMS2-203ENST00000409254 L3MBTL2Q969R5 705 aa18.74■□□□□ 0.59
LIMS2-203ENST00000409254 EID1Q9Y6B2 187 aa18.74■□□□□ 0.59
LIMS2-203ENST00000409254 RGL3Q3MIN7 710 aa18.72■□□□□ 0.59
LIMS2-203ENST00000409254 RALGAPBQ86X10 1494 aa18.71■□□□□ 0.59
LIMS2-203ENST00000409254 ANKLE2Q86XL3 938 aa18.71■□□□□ 0.59
LIMS2-203ENST00000409254 KNDC1Q76NI1 1749 aa18.7■□□□□ 0.58
LIMS2-203ENST00000409254 DCAF11Q8TEB1 546 aa18.7■□□□□ 0.58
LIMS2-203ENST00000409254 ALKQ9UM73 1620 aa18.7■□□□□ 0.58
LIMS2-203ENST00000409254 NPHP4O75161 1426 aaPredicted RBP18.67■□□□□ 0.58
LIMS2-203ENST00000409254 PPP1R15AO75807 674 aaPredicted RBP18.67■□□□□ 0.58
LIMS2-203ENST00000409254 CHD2O14647 1828 aaKnown RBP18.67■□□□□ 0.58
LIMS2-203ENST00000409254 PIK3R4Q99570 1358 aa18.67■□□□□ 0.58
LIMS2-203ENST00000409254 TXNDC2Q86VQ3 553 aa18.66■□□□□ 0.58
LIMS2-203ENST00000409254 GPRASP1Q5JY77 1395 aa18.66■□□□□ 0.58
LIMS2-203ENST00000409254 ADGRB1O14514 1584 aa18.65■□□□□ 0.58
LIMS2-203ENST00000409254 LTKP29376 864 aa18.65■□□□□ 0.58
LIMS2-203ENST00000409254 ADAMTS13Q76LX8 1427 aa18.65■□□□□ 0.58
LIMS2-203ENST00000409254 ADGRF5Q8IZF2 1346 aa18.64■□□□□ 0.57
LIMS2-203ENST00000409254 NWD1Q149M9 1564 aa18.64■□□□□ 0.57
LIMS2-203ENST00000409254 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
LIMS2-203ENST00000409254 ASXL1Q8IXJ9 1541 aa18.62■□□□□ 0.57
LIMS2-203ENST00000409254 C14orf93Q9H972 538 aaKnown RBP18.6■□□□□ 0.57
LIMS2-203ENST00000409254 TBX22Q9Y458 520 aa18.6■□□□□ 0.57
LIMS2-203ENST00000409254 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
LIMS2-203ENST00000409254 ARHGEF28Q8N1W1 1705 aaKnown RBP18.6■□□□□ 0.57
LIMS2-203ENST00000409254 CPS1P31327 1500 aa18.59■□□□□ 0.57
LIMS2-203ENST00000409254 DLC1Q96QB1 1528 aa18.59■□□□□ 0.57
LIMS2-203ENST00000409254 TECPR2O15040 1411 aa18.59■□□□□ 0.57
LIMS2-203ENST00000409254 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
LIMS2-203ENST00000409254 ROCK2O75116 1388 aaKnown RBP18.56■□□□□ 0.56
LIMS2-203ENST00000409254 HSPA2P54652 639 aa18.56■□□□□ 0.56
LIMS2-203ENST00000409254 NKTRP30414 1462 aaKnown RBP18.56■□□□□ 0.56
LIMS2-203ENST00000409254 PTCH1Q13635 1447 aa18.56■□□□□ 0.56
LIMS2-203ENST00000409254 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
LIMS2-203ENST00000409254 YTHDC2Q9H6S0 1430 aaKnown RBP18.53■□□□□ 0.56
LIMS2-203ENST00000409254 LRPPRCP42704 1394 aaKnown RBP18.53■□□□□ 0.56
LIMS2-203ENST00000409254 EIF3AQ14152 1382 aaKnown RBP18.53■□□□□ 0.56
LIMS2-203ENST00000409254 NCKAP5LQ9HCH0 1330 aa18.52■□□□□ 0.56
LIMS2-203ENST00000409254 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.56
LIMS2-203ENST00000409254 ABCC11Q96J66 1382 aa18.52■□□□□ 0.55
LIMS2-203ENST00000409254 FAM135BQ49AJ0 1406 aa18.51■□□□□ 0.55
LIMS2-203ENST00000409254 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
LIMS2-203ENST00000409254 STRCP1A6NGW2 1772 aa18.5■□□□□ 0.55
LIMS2-203ENST00000409254 METP08581 1390 aa18.5■□□□□ 0.55
LIMS2-203ENST00000409254 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
LIMS2-203ENST00000409254 SBNO2Q9Y2G9 1366 aa18.48■□□□□ 0.55
LIMS2-203ENST00000409254 SIRT1Q96EB6 747 aa18.48■□□□□ 0.55
LIMS2-203ENST00000409254 ADGRB2O60241 1585 aa18.47■□□□□ 0.55
LIMS2-203ENST00000409254 BCANQ96GW7 911 aa18.47■□□□□ 0.55
LIMS2-203ENST00000409254 PTPRUQ92729 1446 aa18.46■□□□□ 0.55
LIMS2-203ENST00000409254 NCOA3Q9Y6Q9 1424 aa18.46■□□□□ 0.55
LIMS2-203ENST00000409254 SLC24A1O60721 1099 aa18.45■□□□□ 0.54
LIMS2-203ENST00000409254 SLC26A8Q96RN1 970 aa18.45■□□□□ 0.54
LIMS2-203ENST00000409254 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
LIMS2-203ENST00000409254 USP47Q96K76 1375 aa18.44■□□□□ 0.54
LIMS2-203ENST00000409254 KCNA6P17658 529 aa18.44■□□□□ 0.54
LIMS2-203ENST00000409254 NBPF1Q3BBV0 1214 aa18.44■□□□□ 0.54
LIMS2-203ENST00000409254 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
LIMS2-203ENST00000409254 FBXO41Q8TF61 875 aa18.42■□□□□ 0.54
LIMS2-203ENST00000409254 NALCNQ8IZF0 1738 aa18.41■□□□□ 0.54
LIMS2-203ENST00000409254 CDC42BPGQ6DT37 1551 aa18.4■□□□□ 0.54
LIMS2-203ENST00000409254 EIF4G2P78344 907 aaKnown RBP eCLIP18.39■□□□□ 0.53
LIMS2-203ENST00000409254 LTBP4Q8N2S1 1624 aa18.38■□□□□ 0.53
LIMS2-203ENST00000409254 TMEM132EQ6IEE7 984 aa18.38■□□□□ 0.53
LIMS2-203ENST00000409254 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
LIMS2-203ENST00000409254 DCCP43146 1447 aa18.38■□□□□ 0.53
LIMS2-203ENST00000409254 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-203ENST00000409254 CENPJQ9HC77 1338 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-203ENST00000409254 ROBO2Q9HCK4 1378 aa18.37■□□□□ 0.53
LIMS2-203ENST00000409254 IQSEC2Q5JU85 1478 aa18.37■□□□□ 0.53
LIMS2-203ENST00000409254 ITSN1Q15811 1721 aa18.36■□□□□ 0.53
LIMS2-203ENST00000409254 ADGRL3Q9HAR2 1447 aa18.35■□□□□ 0.53
LIMS2-203ENST00000409254 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
LIMS2-203ENST00000409254 LRRC7Q96NW7 1537 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms