RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 NCBP3Q53F19 620 aaKnown RBP6.29□□□□□ -1.4
SCN3A-203ENST00000409101 RBM42Q9BTD8 480 aaKnown RBP6.29□□□□□ -1.4
SCN3A-203ENST00000409101 BICRAQ9NZM4 1560 aa6.29□□□□□ -1.4
SCN3A-203ENST00000409101 HSP90B1P14625 803 aaKnown RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 PMFBP1Q8TBY8 1022 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 TROQ12816 1431 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 C9orf84Q5VXU9 1444 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 ERICH3Q5RHP9 1530 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 TRIM6-TRIM34B2RNG4 842 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 TATP17735 454 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 ANP32EQ9BTT0 268 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 RRP7AQ9Y3A4 280 aaKnown RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 NLRP13Q86W25 1043 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 GRIN2AQ12879 1464 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 LRRC9Q6ZRR7 1453 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 PLEKHO1Q53GL0 409 aaPredicted RBP6.28□□□□□ -1.4
SCN3A-203ENST00000409101 PRAM1Q96QH2 718 aa6.28□□□□□ -1.4
SCN3A-203ENST00000409101 USP47Q96K76 1375 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 RAD21O60216 631 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 KIF6Q6ZMV9 814 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 C9orf78Q9NZ63 289 aaPredicted RBP6.27□□□□□ -1.41
SCN3A-203ENST00000409101 IQGAP2Q13576 1575 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 SLC26A8Q96RN1 970 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 ABCA10Q8WWZ4 1543 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 HSCBQ8IWL3 235 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 MYBBP1AQ9BQG0 1328 aaKnown RBP6.27□□□□□ -1.41
SCN3A-203ENST00000409101 TEX14Q8IWB6 1497 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 PPP6R1Q9UPN7 881 aa6.27□□□□□ -1.41
SCN3A-203ENST00000409101 ADGRL1O94910 1474 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 MARCH6O60337 910 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 B4GALNT3Q6L9W6 998 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 PPP4R2Q9NY27 417 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 PRDM11Q9NQV5 511 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 EPRSP07814 1512 aaKnown RBP6.26□□□□□ -1.41
SCN3A-203ENST00000409101 LRRFIP1Q32MZ4 808 aaKnown RBP6.26□□□□□ -1.41
SCN3A-203ENST00000409101 NECTIN2Q92692 538 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 RPGRIP1LQ68CZ1 1315 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 ELL2O00472 640 aaPredicted RBP6.26□□□□□ -1.41
SCN3A-203ENST00000409101 PTMAP06454 111 aaKnown RBP6.26□□□□□ -1.41
SCN3A-203ENST00000409101 TSPYL4Q9UJ04 414 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 SPG7Q9UQ90 795 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 PLB1Q6P1J6 1458 aa6.26□□□□□ -1.41
SCN3A-203ENST00000409101 TCEAL9Q9UHQ7 104 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 DENND4BO75064 1496 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-203ENST00000409101 RIC3Q7Z5B4 369 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 DDX54Q8TDD1 881 aaKnown RBP6.25□□□□□ -1.41
SCN3A-203ENST00000409101 CDK19Q9BWU1 502 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 RCAN3Q9UKA8 241 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 CUL7Q14999 1698 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 RTEL1-TNFRSF6BF6WH68 1400 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 CABP4P57796 275 aa6.25□□□□□ -1.41
SCN3A-203ENST00000409101 ZNF692Q9BU19 519 aaPredicted RBP6.25□□□□□ -1.41
SCN3A-203ENST00000409101 NBR1Q14596 966 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 GGNBP2Q9H3C7 697 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 RIPK4P57078 832 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 ERBINQ96RT1 1412 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 RASSF8Q8NHQ8 419 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 KIF14Q15058 1648 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 XPCQ01831 940 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-203ENST00000409101 CFAP70Q5T0N1 1121 aa6.24□□□□□ -1.41
SCN3A-203ENST00000409101 HTATSF1O43719 755 aaKnown RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 TOM1O60784 492 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 HMOX1P09601 288 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 GAS2L2Q8NHY3 880 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 ADAMTS2O95450 1211 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 AIMP1Q12904 312 aaKnown RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 NGLY1Q96IV0 654 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 LRPPRCP42704 1394 aaKnown RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 FAM177BA6PVY3 158 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 UBAP1LF5GYI3 381 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 URB2Q14146 1524 aaKnown RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 HFM1A2PYH4 1435 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 CLUAP1Q96AJ1 413 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 CEBPAP49715 358 aaPredicted RBP6.23□□□□□ -1.41
SCN3A-203ENST00000409101 PLCB2Q00722 1185 aa6.23□□□□□ -1.41
SCN3A-203ENST00000409101 ARHGEF11O15085 1522 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 NRDCO43847 1150 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 G3BP1Q13283 466 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCN3A-203ENST00000409101 AKAP17AQ02040 695 aaKnown RBP6.22□□□□□ -1.41
SCN3A-203ENST00000409101 FKBP5Q13451 457 aaPredicted RBP6.22□□□□□ -1.41
SCN3A-203ENST00000409101 SYNE3Q6ZMZ3 975 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 GNAI1P63096 354 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 TRIM44Q96DX7 344 aaPredicted RBP6.22□□□□□ -1.41
SCN3A-203ENST00000409101 E9PSI1 815 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 CCDC34Q96HJ3 373 aa6.22□□□□□ -1.41
SCN3A-203ENST00000409101 ZNF608Q9ULD9 1512 aaPredicted RBP6.21□□□□□ -1.41
SCN3A-203ENST00000409101 IFIT2P09913 472 aaKnown RBP6.21□□□□□ -1.41
SCN3A-203ENST00000409101 CDK13Q14004 1512 aaKnown RBP6.21□□□□□ -1.41
SCN3A-203ENST00000409101 ROCK1Q13464 1354 aa6.21□□□□□ -1.41
SCN3A-203ENST00000409101 DHX16O60231 1041 aaKnown RBP6.21□□□□□ -1.42
SCN3A-203ENST00000409101 CCDC141Q6ZP82 1450 aa6.21□□□□□ -1.42
SCN3A-203ENST00000409101 APPP05067 770 aa6.21□□□□□ -1.42
SCN3A-203ENST00000409101 KIAA2012Q0VF49 1180 aa6.21□□□□□ -1.42
SCN3A-203ENST00000409101 CCAR1Q8IX12 1150 aaKnown RBP6.21□□□□□ -1.42
SCN3A-203ENST00000409101 RUNDC1Q96C34 613 aa6.21□□□□□ -1.42
SCN3A-203ENST00000409101 SUPT6HQ7KZ85 1726 aaKnown RBP6.21□□□□□ -1.42
SCN3A-203ENST00000409101 ZKSCAN2Q63HK3 967 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 KCNH5Q8NCM2 988 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 CABP1Q9NZU7 370 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 FANCAO15360 1455 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms