RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 RIMS1Q86UR5 1692 aaKnown RBP16.67■□□□□ 0.26
ILF3-202ENST00000407004 MYO3AQ8NEV4 1616 aa16.67■□□□□ 0.26
ILF3-202ENST00000407004 VSIG10Q8N0Z9 540 aa16.67■□□□□ 0.26
ILF3-202ENST00000407004 STAC3Q96MF2 364 aa16.66■□□□□ 0.26
ILF3-202ENST00000407004 PPLO60437 1756 aa16.66■□□□□ 0.26
ILF3-202ENST00000407004 MYOM2P54296 1465 aa16.66■□□□□ 0.26
ILF3-202ENST00000407004 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
ILF3-202ENST00000407004 NRXN1Q9ULB1 1477 aa16.65■□□□□ 0.26
ILF3-202ENST00000407004 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
ILF3-202ENST00000407004 UGGT1Q9NYU2 1555 aa16.65■□□□□ 0.26
ILF3-202ENST00000407004 UBR1Q8IWV7 1749 aa16.65■□□□□ 0.26
ILF3-202ENST00000407004 KIF3BO15066 747 aa16.64■□□□□ 0.25
ILF3-202ENST00000407004 ZFYVE9O95405 1425 aa16.64■□□□□ 0.25
ILF3-202ENST00000407004 FANCIQ9NVI1 1328 aa16.63■□□□□ 0.25
ILF3-202ENST00000407004 UHRF1BP1Q6BDS2 1440 aa16.63■□□□□ 0.25
ILF3-202ENST00000407004 DHX37Q8IY37 1157 aaKnown RBP16.63■□□□□ 0.25
ILF3-202ENST00000407004 ZMYND15Q9H091 742 aa16.63■□□□□ 0.25
ILF3-202ENST00000407004 SLIT1O75093 1534 aa16.6■□□□□ 0.25
ILF3-202ENST00000407004 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
ILF3-202ENST00000407004 ZMYM3Q14202 1370 aa16.58■□□□□ 0.24
ILF3-202ENST00000407004 FGD1P98174 961 aa16.58■□□□□ 0.24
ILF3-202ENST00000407004 ARHGAP23Q9P227 1491 aa16.58■□□□□ 0.24
ILF3-202ENST00000407004 NEXMIFQ5QGS0 1516 aa16.57■□□□□ 0.24
ILF3-202ENST00000407004 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
ILF3-202ENST00000407004 A2ML1A8K2U0 1454 aa16.56■□□□□ 0.24
ILF3-202ENST00000407004 ERICH6BQ5W0A0 696 aa16.56■□□□□ 0.24
ILF3-202ENST00000407004 SLC52A1Q9NWF4 448 aa16.56■□□□□ 0.24
ILF3-202ENST00000407004 CCDC144AA2RUR9 1427 aa16.55■□□□□ 0.24
ILF3-202ENST00000407004 PRAG1Q86YV5 1406 aa16.55■□□□□ 0.24
ILF3-202ENST00000407004 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
ILF3-202ENST00000407004 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
ILF3-202ENST00000407004 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
ILF3-202ENST00000407004 RPGRIP1LQ68CZ1 1315 aa16.55■□□□□ 0.24
ILF3-202ENST00000407004 PTPRMP28827 1452 aa16.55■□□□□ 0.24
ILF3-202ENST00000407004 DIP2AQ14689 1571 aa16.54■□□□□ 0.24
ILF3-202ENST00000407004 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
ILF3-202ENST00000407004 PKD2Q13563 968 aa16.54■□□□□ 0.24
ILF3-202ENST00000407004 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
ILF3-202ENST00000407004 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
ILF3-202ENST00000407004 SETD1AO15047 1707 aaKnown RBP16.54■□□□□ 0.24
ILF3-202ENST00000407004 TRPM1Q7Z4N2 1603 aa16.53■□□□□ 0.24
ILF3-202ENST00000407004 RBM10P98175 930 aaKnown RBP16.52■□□□□ 0.24
ILF3-202ENST00000407004 MYO5BQ9ULV0 1848 aa16.52■□□□□ 0.24
ILF3-202ENST00000407004 HAP1P54257 671 aaPredicted RBP16.52■□□□□ 0.23
ILF3-202ENST00000407004 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.23
ILF3-202ENST00000407004 TNRQ92752 1358 aa16.5■□□□□ 0.23
ILF3-202ENST00000407004 POLR1AO95602 1720 aaPredicted RBP16.49■□□□□ 0.23
ILF3-202ENST00000407004 KNDC1Q76NI1 1749 aa16.49■□□□□ 0.23
ILF3-202ENST00000407004 RALGAPBQ86X10 1494 aa16.46■□□□□ 0.23
ILF3-202ENST00000407004 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.22
ILF3-202ENST00000407004 MED14O60244 1454 aa16.46■□□□□ 0.22
ILF3-202ENST00000407004 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
ILF3-202ENST00000407004 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
ILF3-202ENST00000407004 GPRASP1Q5JY77 1395 aa16.45■□□□□ 0.22
ILF3-202ENST00000407004 GGT6Q6P531 493 aa16.44■□□□□ 0.22
ILF3-202ENST00000407004 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
ILF3-202ENST00000407004 NOP58Q9Y2X3 529 aaKnown RBP16.44■□□□□ 0.22
ILF3-202ENST00000407004 PIK3C2GO75747 1445 aa16.42■□□□□ 0.22
ILF3-202ENST00000407004 AAMPQ13685 434 aa16.42■□□□□ 0.22
ILF3-202ENST00000407004 DLC1Q96QB1 1528 aa16.39■□□□□ 0.21
ILF3-202ENST00000407004 GLIPR1L2Q4G1C9 344 aa16.39■□□□□ 0.21
ILF3-202ENST00000407004 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
ILF3-202ENST00000407004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.38■□□□□ 0.211e-8■■□□□ 13.5
ILF3-202ENST00000407004 ADGRB1O14514 1584 aa16.38■□□□□ 0.21
ILF3-202ENST00000407004 NWD1Q149M9 1564 aa16.38■□□□□ 0.21
ILF3-202ENST00000407004 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
ILF3-202ENST00000407004 ARID4BQ4LE39 1312 aaPredicted RBP16.35■□□□□ 0.21
ILF3-202ENST00000407004 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
ILF3-202ENST00000407004 TMEM2Q9UHN6 1383 aa16.35■□□□□ 0.21
ILF3-202ENST00000407004 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
ILF3-202ENST00000407004 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.21
ILF3-202ENST00000407004 PPP1R15AO75807 674 aaPredicted RBP16.33■□□□□ 0.2
ILF3-202ENST00000407004 CPS1P31327 1500 aa16.33■□□□□ 0.2
ILF3-202ENST00000407004 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.32■□□□□ 0.2
ILF3-202ENST00000407004 PIK3R4Q99570 1358 aa16.32■□□□□ 0.2
ILF3-202ENST00000407004 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
ILF3-202ENST00000407004 CFAP65Q6ZU64 1925 aaKnown RBP16.32■□□□□ 0.2
ILF3-202ENST00000407004 TECPR2O15040 1411 aa16.32■□□□□ 0.2
ILF3-202ENST00000407004 RIMS2Q9UQ26 1411 aa16.32■□□□□ 0.2
ILF3-202ENST00000407004 ALKQ9UM73 1620 aa16.31■□□□□ 0.2
ILF3-202ENST00000407004 IDI1Q13907 227 aa16.31■□□□□ 0.2
ILF3-202ENST00000407004 KDM4FA0A1W2PPD8 638 aa16.3■□□□□ 0.2
ILF3-202ENST00000407004 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
ILF3-202ENST00000407004 SCAF11Q99590 1463 aaKnown RBP16.3■□□□□ 0.2
ILF3-202ENST00000407004 ASXL1Q8IXJ9 1541 aa16.3■□□□□ 0.2
ILF3-202ENST00000407004 ARHGEF28Q8N1W1 1705 aaKnown RBP16.29■□□□□ 0.2
ILF3-202ENST00000407004 ADGRB2O60241 1585 aa16.29■□□□□ 0.2
ILF3-202ENST00000407004 STRCQ7RTU9 1775 aa16.28■□□□□ 0.2
ILF3-202ENST00000407004 CHD2O14647 1828 aaKnown RBP16.28■□□□□ 0.2
ILF3-202ENST00000407004 ANP32CO43423 234 aa16.27■□□□□ 0.2
ILF3-202ENST00000407004 HDGFP51858 240 aaKnown RBP16.27■□□□□ 0.2
ILF3-202ENST00000407004 TAF7LQ5H9L4 462 aa16.27■□□□□ 0.2
ILF3-202ENST00000407004 FOXD1Q16676 465 aa16.26■□□□□ 0.19
ILF3-202ENST00000407004 FBXO31Q5XUX0 539 aaPredicted RBP16.26■□□□□ 0.19
ILF3-202ENST00000407004 SBNO2Q9Y2G9 1366 aa16.26■□□□□ 0.19
ILF3-202ENST00000407004 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
ILF3-202ENST00000407004 SIRT1Q96EB6 747 aa16.25■□□□□ 0.19
ILF3-202ENST00000407004 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
ILF3-202ENST00000407004 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
ILF3-202ENST00000407004 SIN3AQ96ST3 1273 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms