RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 PRKRIP1Q9H875 184 aaPredicted RBP40.08■■■■■ 4.01
CSNK1E-205ENST00000405675 PIK3C2BO00750 1634 aa40.08■■■■■ 4.01
CSNK1E-205ENST00000405675 ADGRB3O60242 1522 aa40.08■■■■■ 4.01
CSNK1E-205ENST00000405675 IDI1Q13907 227 aa40.05■■■■■ 4
CSNK1E-205ENST00000405675 STAC3Q96MF2 364 aa40.04■■■■■ 4
CSNK1E-205ENST00000405675 ERVK-7P63135 1459 aa40.04■■■■■ 4
CSNK1E-205ENST00000405675 SLC52A1Q9NWF4 448 aa40.02■■■■■ 4
CSNK1E-205ENST00000405675 ZMYM3Q14202 1370 aa40■■■■□ 3.99
CSNK1E-205ENST00000405675 TESK2Q96S53 571 aa39.97■■■■□ 3.99
CSNK1E-205ENST00000405675 CCDC184Q52MB2 194 aa39.95■■■■□ 3.99
CSNK1E-205ENST00000405675 MYOM2P54296 1465 aa39.94■■■■□ 3.98
CSNK1E-205ENST00000405675 IFT172Q9UG01 1749 aa39.94■■■■□ 3.98
CSNK1E-205ENST00000405675 ADGRF5Q8IZF2 1346 aa39.92■■■■□ 3.98
CSNK1E-205ENST00000405675 SPATA31D1Q6ZQQ2 1576 aa39.92■■■■□ 3.98
CSNK1E-205ENST00000405675 IQGAP1P46940 1657 aa39.89■■■■□ 3.98
CSNK1E-205ENST00000405675 DISP3Q9P2K9 1392 aa39.89■■■■□ 3.98
CSNK1E-205ENST00000405675 RPGRIP1LQ68CZ1 1315 aa39.87■■■■□ 3.97
CSNK1E-205ENST00000405675 KIAA1210Q9ULL0 1709 aa39.85■■■■□ 3.97
CSNK1E-205ENST00000405675 PPLO60437 1756 aa39.84■■■■□ 3.97
CSNK1E-205ENST00000405675 TMEM131LA2VDJ0 1609 aa39.83■■■■□ 3.97
CSNK1E-205ENST00000405675 SCAF11Q99590 1463 aaKnown RBP39.82■■■■□ 3.97
CSNK1E-205ENST00000405675 NRXN1Q9ULB1 1477 aa39.82■■■■□ 3.97
CSNK1E-205ENST00000405675 CFAP70Q5T0N1 1121 aa39.81■■■■□ 3.96
CSNK1E-205ENST00000405675 CNGB1Q14028 1251 aaPredicted RBP39.8■■■■□ 3.96
CSNK1E-205ENST00000405675 NUTM2DQ5VT03 806 aaPredicted RBP39.79■■■■□ 3.96
CSNK1E-205ENST00000405675 MYO5BQ9ULV0 1848 aa39.78■■■■□ 3.96
CSNK1E-205ENST00000405675 NEXMIFQ5QGS0 1516 aa39.78■■■■□ 3.96
CSNK1E-205ENST00000405675 STAG3Q9UJ98 1225 aa39.76■■■■□ 3.96
CSNK1E-205ENST00000405675 MRS2Q9HD23 443 aa39.76■■■■□ 3.95
CSNK1E-205ENST00000405675 CEBPAP49715 358 aaPredicted RBP39.75■■■■□ 3.95
CSNK1E-205ENST00000405675 TMF1P82094 1093 aa39.75■■■■□ 3.95
CSNK1E-205ENST00000405675 FER1L4A9Z1Z3 1794 aa39.72■■■■□ 3.95
CSNK1E-205ENST00000405675 VGFO15240 615 aaPredicted RBP39.71■■■■□ 3.95
CSNK1E-205ENST00000405675 TNRQ92752 1358 aa39.71■■■■□ 3.95
CSNK1E-205ENST00000405675 PIK3C2GO75747 1445 aa39.71■■■■□ 3.95
CSNK1E-205ENST00000405675 A2ML1A8K2U0 1454 aa39.67■■■■□ 3.94
CSNK1E-205ENST00000405675 PLPPR3Q6T4P5 718 aa39.65■■■■□ 3.94
CSNK1E-205ENST00000405675 C3P01024 1663 aa39.64■■■■□ 3.94
CSNK1E-205ENST00000405675 C14orf93Q9H972 538 aaKnown RBP39.64■■■■□ 3.94
CSNK1E-205ENST00000405675 HNRNPUQ00839 825 aaKnown RBP eCLIP39.63■■■■□ 3.93
CSNK1E-205ENST00000405675 EIF3AQ14152 1382 aaKnown RBP39.62■■■■□ 3.93
CSNK1E-205ENST00000405675 ZFYVE9O95405 1425 aa39.62■■■■□ 3.93
CSNK1E-205ENST00000405675 FAM9BQ8IZU0 186 aa39.62■■■■□ 3.93
CSNK1E-205ENST00000405675 PER1O15534 1290 aaPredicted RBP39.6■■■■□ 3.93
CSNK1E-205ENST00000405675 SENP3Q9H4L4 574 aaPredicted RBP39.58■■■■□ 3.93
CSNK1E-205ENST00000405675 SETBP1Q9Y6X0 1596 aa39.56■■■■□ 3.92
CSNK1E-205ENST00000405675 PANK3Q9H999 370 aa39.56■■■■□ 3.92
CSNK1E-205ENST00000405675 TMEM132EQ6IEE7 984 aa39.52■■■■□ 3.92
CSNK1E-205ENST00000405675 RIMS2Q9UQ26 1411 aa39.52■■■■□ 3.92
CSNK1E-205ENST00000405675 RALBP1Q15311 655 aa39.51■■■■□ 3.92
CSNK1E-205ENST00000405675 KTN1Q86UP2 1357 aaKnown RBP39.51■■■■□ 3.92
CSNK1E-205ENST00000405675 ADGRB1O14514 1584 aa39.5■■■■□ 3.91
CSNK1E-205ENST00000405675 RIMS1Q86UR5 1692 aaKnown RBP39.47■■■■□ 3.91
CSNK1E-205ENST00000405675 NLRP1Q9C000 1473 aa39.47■■■■□ 3.91
CSNK1E-205ENST00000405675 CDCA8Q53HL2 280 aa39.46■■■■□ 3.91
CSNK1E-205ENST00000405675 PARD3Q8TEW0 1356 aa39.46■■■■□ 3.91
CSNK1E-205ENST00000405675 MYBBP1AQ9BQG0 1328 aaKnown RBP39.46■■■■□ 3.91
CSNK1E-205ENST00000405675 ADAMTSL3P82987 1691 aa39.45■■■■□ 3.91
CSNK1E-205ENST00000405675 UBR1Q8IWV7 1749 aa39.45■■■■□ 3.91
CSNK1E-205ENST00000405675 MYO3AQ8NEV4 1616 aa39.44■■■■□ 3.9
CSNK1E-205ENST00000405675 KDM5AP29375 1690 aaKnown RBP39.42■■■■□ 3.9
CSNK1E-205ENST00000405675 TRAK1Q9UPV9 953 aa39.41■■■■□ 3.9
CSNK1E-205ENST00000405675 MYOM1P52179 1685 aa39.38■■■■□ 3.89
CSNK1E-205ENST00000405675 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.38■■■■□ 3.89
CSNK1E-205ENST00000405675 TMC1Q8TDI8 760 aa39.38■■■■□ 3.89
CSNK1E-205ENST00000405675 TMEM2Q9UHN6 1383 aa39.37■■■■□ 3.89
CSNK1E-205ENST00000405675 CC2D1BQ5T0F9 858 aaKnown RBP39.37■■■■□ 3.89
CSNK1E-205ENST00000405675 BRD4O60885 1362 aaPredicted RBP39.37■■■■□ 3.89
CSNK1E-205ENST00000405675 PNISRQ8TF01 805 aaKnown RBP39.37■■■■□ 3.89
CSNK1E-205ENST00000405675 CENPJQ9HC77 1338 aaPredicted RBP39.36■■■■□ 3.89
CSNK1E-205ENST00000405675 SBNO2Q9Y2G9 1366 aa39.35■■■■□ 3.89
CSNK1E-205ENST00000405675 ASXL1Q8IXJ9 1541 aa39.34■■■■□ 3.89
CSNK1E-205ENST00000405675 ALKQ9UM73 1620 aa39.34■■■■□ 3.89
CSNK1E-205ENST00000405675 SLC24A1O60721 1099 aa39.32■■■■□ 3.89
CSNK1E-205ENST00000405675 HDGFP51858 240 aaKnown RBP39.32■■■■□ 3.89
CSNK1E-205ENST00000405675 SUPT16HQ9Y5B9 1047 aaKnown RBP39.3■■■■□ 3.88
CSNK1E-205ENST00000405675 NLRP13Q86W25 1043 aa39.28■■■■□ 3.88
CSNK1E-205ENST00000405675 STK26Q9P289 416 aa39.27■■■■□ 3.88
CSNK1E-205ENST00000405675 QRICH2Q9H0J4 1663 aa39.27■■■■□ 3.88
CSNK1E-205ENST00000405675 ZBED9Q6R2W3 1325 aa39.27■■■■□ 3.88
CSNK1E-205ENST00000405675 PTPRMP28827 1452 aa39.25■■■■□ 3.87
CSNK1E-205ENST00000405675 LTKP29376 864 aa39.24■■■■□ 3.87
CSNK1E-205ENST00000405675 KNSTRNQ9Y448 316 aa39.24■■■■□ 3.87
CSNK1E-205ENST00000405675 NRXN3Q9Y4C0 1643 aa39.22■■■■□ 3.87
CSNK1E-205ENST00000405675 LRPPRCP42704 1394 aaKnown RBP39.22■■■■□ 3.87
CSNK1E-205ENST00000405675 AMER1Q5JTC6 1135 aaPredicted RBP39.22■■■■□ 3.87
CSNK1E-205ENST00000405675 YTHDC2Q9H6S0 1430 aaKnown RBP39.21■■■■□ 3.87
CSNK1E-205ENST00000405675 THEMISQ8N1K5 641 aaPredicted RBP39.2■■■■□ 3.87
CSNK1E-205ENST00000405675 ARHGEF28Q8N1W1 1705 aaKnown RBP39.2■■■■□ 3.87
CSNK1E-205ENST00000405675 TXNDC2Q86VQ3 553 aa39.2■■■■□ 3.87
CSNK1E-205ENST00000405675 BCANQ96GW7 911 aa39.19■■■■□ 3.86
CSNK1E-205ENST00000405675 SETD1AO15047 1707 aaKnown RBP39.18■■■■□ 3.86
CSNK1E-205ENST00000405675 SLIT1O75093 1534 aa39.16■■■■□ 3.86
CSNK1E-205ENST00000405675 ARHGAP23Q9P227 1491 aa39.16■■■■□ 3.86
CSNK1E-205ENST00000405675 CEP170BQ9Y4F5 1589 aaPredicted RBP39.15■■■■□ 3.86
CSNK1E-205ENST00000405675 EID1Q9Y6B2 187 aa39.15■■■■□ 3.86
CSNK1E-205ENST00000405675 METP08581 1390 aa39.12■■■■□ 3.85
CSNK1E-205ENST00000405675 PLEKHG1Q9ULL1 1385 aa39.11■■■■□ 3.85
CSNK1E-205ENST00000405675 SAFB2Q14151 953 aaKnown RBP eCLIP39.1■■■■□ 3.85
CSNK1E-205ENST00000405675 CARD14Q9BXL6 1004 aa39.1■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms