RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
SNED1-205ENST00000405547 NGDNQ8NEJ9 315 aaKnown RBP16.34■□□□□ 0.21
SNED1-205ENST00000405547 API5Q9BZZ5 524 aaKnown RBP16.34■□□□□ 0.21
SNED1-205ENST00000405547 MRE11P49959 708 aa16.33■□□□□ 0.21
SNED1-205ENST00000405547 INTS3Q68E01 1043 aaKnown RBP16.33■□□□□ 0.21
SNED1-205ENST00000405547 IGF1RP08069 1367 aa16.33■□□□□ 0.21
SNED1-205ENST00000405547 COG3Q96JB2 828 aa16.32■□□□□ 0.2
SNED1-205ENST00000405547 DIAPH3Q9NSV4 1193 aa16.32■□□□□ 0.2
SNED1-205ENST00000405547 ZKSCAN1P17029 563 aaPredicted RBP16.32■□□□□ 0.2
SNED1-205ENST00000405547 LRRFIP1Q32MZ4 808 aaKnown RBP16.32■□□□□ 0.2
SNED1-205ENST00000405547 NCOA2Q15596 1464 aa16.32■□□□□ 0.2
SNED1-205ENST00000405547 ELL2O00472 640 aaPredicted RBP16.31■□□□□ 0.2
SNED1-205ENST00000405547 CSB-PGBD3P0DP91 1061 aa16.31■□□□□ 0.2
SNED1-205ENST00000405547 GPS2Q13227 327 aa16.31■□□□□ 0.2
SNED1-205ENST00000405547 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
SNED1-205ENST00000405547 MTERF4Q7Z6M4 381 aaKnown RBP16.31■□□□□ 0.2
SNED1-205ENST00000405547 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
SNED1-205ENST00000405547 TSR1Q2NL82 804 aaKnown RBP16.31■□□□□ 0.2
SNED1-205ENST00000405547 FOXD4L6Q3SYB3 417 aaPredicted RBP16.3■□□□□ 0.2
SNED1-205ENST00000405547 FOXD4L3Q6VB84 417 aaPredicted RBP16.3■□□□□ 0.2
SNED1-205ENST00000405547 DIAPH1O60610 1272 aaKnown RBP16.3■□□□□ 0.2
SNED1-205ENST00000405547 RIPK4P57078 832 aa16.3■□□□□ 0.2
SNED1-205ENST00000405547 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
SNED1-205ENST00000405547 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
SNED1-205ENST00000405547 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
SNED1-205ENST00000405547 RASSF8Q8NHQ8 419 aa16.29■□□□□ 0.2
SNED1-205ENST00000405547 MAP7D2Q96T17 732 aa16.29■□□□□ 0.2
SNED1-205ENST00000405547 TPM1P09493 284 aa16.29■□□□□ 0.2
SNED1-205ENST00000405547 NASPP49321 788 aaPredicted RBP16.28■□□□□ 0.2
SNED1-205ENST00000405547 ZNF330Q9Y3S2 320 aaPredicted RBP16.28■□□□□ 0.2
SNED1-205ENST00000405547 FAM13BQ9NYF5 915 aa16.28■□□□□ 0.2
SNED1-205ENST00000405547 CLSTN1O94985 981 aa16.28■□□□□ 0.2
SNED1-205ENST00000405547 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
SNED1-205ENST00000405547 NUTM2DQ5VT03 806 aaPredicted RBP16.28■□□□□ 0.2
SNED1-205ENST00000405547 TIAM1Q13009 1591 aa16.27■□□□□ 0.2
SNED1-205ENST00000405547 ARAP1Q96P48 1450 aa16.27■□□□□ 0.2
SNED1-205ENST00000405547 RNF20Q5VTR2 975 aa16.27■□□□□ 0.19
SNED1-205ENST00000405547 MCTP1Q6DN14 999 aa16.27■□□□□ 0.19
SNED1-205ENST00000405547 TPD52L1Q16890 204 aaPredicted RBP16.26■□□□□ 0.19
SNED1-205ENST00000405547 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
SNED1-205ENST00000405547 LNPKQ9C0E8 428 aa16.26■□□□□ 0.19
SNED1-205ENST00000405547 TOP2BQ02880 1626 aa16.25■□□□□ 0.19
SNED1-205ENST00000405547 EHBP1L1Q8N3D4 1523 aa16.25■□□□□ 0.19
SNED1-205ENST00000405547 CREBRFQ8IUR6 639 aa16.25■□□□□ 0.19
SNED1-205ENST00000405547 PTPRGP23470 1445 aa16.25■□□□□ 0.19
SNED1-205ENST00000405547 ZNF771Q7L3S4 317 aaPredicted RBP16.25■□□□□ 0.19
SNED1-205ENST00000405547 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
SNED1-205ENST00000405547 TRAK2O60296 914 aa16.24■□□□□ 0.19
SNED1-205ENST00000405547 CCDC70Q6NSX1 233 aa16.24■□□□□ 0.19
SNED1-205ENST00000405547 GNAI1P63096 354 aa16.24■□□□□ 0.19
SNED1-205ENST00000405547 PANK1Q8TE04 598 aa16.24■□□□□ 0.19
SNED1-205ENST00000405547 AKNAQ7Z591 1439 aa16.24■□□□□ 0.19
SNED1-205ENST00000405547 TEX35Q5T0J7 233 aa16.24■□□□□ 0.19
SNED1-205ENST00000405547 C9orf78Q9NZ63 289 aaPredicted RBP16.24■□□□□ 0.19
SNED1-205ENST00000405547 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
SNED1-205ENST00000405547 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
SNED1-205ENST00000405547 NEXNQ0ZGT2 675 aa16.23■□□□□ 0.19
SNED1-205ENST00000405547 HOOK1Q9UJC3 728 aaKnown RBP16.23■□□□□ 0.19
SNED1-205ENST00000405547 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
SNED1-205ENST00000405547 BACH2Q9BYV9 841 aa16.23■□□□□ 0.19
SNED1-205ENST00000405547 ADAMTS8Q9UP79 889 aa16.23■□□□□ 0.19
SNED1-205ENST00000405547 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
SNED1-205ENST00000405547 SETQ01105 290 aaPredicted RBP16.22■□□□□ 0.19
SNED1-205ENST00000405547 ZNF592Q92610 1267 aa16.22■□□□□ 0.19
SNED1-205ENST00000405547 ANO2Q9NQ90 1003 aa16.22■□□□□ 0.19
SNED1-205ENST00000405547 LTV1Q96GA3 475 aaPredicted RBP16.22■□□□□ 0.19
SNED1-205ENST00000405547 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
SNED1-205ENST00000405547 TEFQ10587 303 aa16.21■□□□□ 0.19
SNED1-205ENST00000405547 SASS6Q6UVJ0 657 aa16.21■□□□□ 0.19
SNED1-205ENST00000405547 CCAR2Q8N163 923 aaKnown RBP16.21■□□□□ 0.19
SNED1-205ENST00000405547 CDC45O75419 566 aa16.21■□□□□ 0.19
SNED1-205ENST00000405547 KAT6BQ8WYB5 2073 aa16.21■□□□□ 0.19
SNED1-205ENST00000405547 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
SNED1-205ENST00000405547 SCAPERQ9BY12 1400 aa16.21■□□□□ 0.19
SNED1-205ENST00000405547 AKAP17AQ02040 695 aaKnown RBP16.21■□□□□ 0.19
SNED1-205ENST00000405547 BICD2Q8TD16 824 aa16.2■□□□□ 0.18
SNED1-205ENST00000405547 MBD3O95983 291 aa16.2■□□□□ 0.18
SNED1-205ENST00000405547 MCM2P49736 904 aa16.2■□□□□ 0.18
SNED1-205ENST00000405547 IFIT2P09913 472 aaKnown RBP16.2■□□□□ 0.18
SNED1-205ENST00000405547 HSP90AB4PQ58FF6 505 aa16.2■□□□□ 0.18
SNED1-205ENST00000405547 TPM2P07951 284 aa16.2■□□□□ 0.18
SNED1-205ENST00000405547 HFM1A2PYH4 1435 aa16.2■□□□□ 0.18
SNED1-205ENST00000405547 HECW1Q76N89 1606 aa16.2■□□□□ 0.18
SNED1-205ENST00000405547 PES1O00541 588 aaKnown RBP16.2■□□□□ 0.18
SNED1-205ENST00000405547 TOMM22Q9NS69 142 aa16.19■□□□□ 0.18
SNED1-205ENST00000405547 SYNE3Q6ZMZ3 975 aa16.19■□□□□ 0.18
SNED1-205ENST00000405547 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
SNED1-205ENST00000405547 LETM1O95202 739 aaPredicted RBP16.19■□□□□ 0.18
SNED1-205ENST00000405547 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
SNED1-205ENST00000405547 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.19■□□□□ 0.18
SNED1-205ENST00000405547 ERC2O15083 957 aa16.18■□□□□ 0.18
SNED1-205ENST00000405547 TRIM29Q14134 588 aa16.18■□□□□ 0.18
SNED1-205ENST00000405547 CFTRP13569 1480 aa16.18■□□□□ 0.18
SNED1-205ENST00000405547 ANKRD20A12PQ8NF67 263 aa16.18■□□□□ 0.18
SNED1-205ENST00000405547 IPO7O95373 1038 aaKnown RBP16.18■□□□□ 0.18
SNED1-205ENST00000405547 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
SNED1-205ENST00000405547 CDCA7LQ96GN5 454 aa16.17■□□□□ 0.18
SNED1-205ENST00000405547 ZNF644Q9H582 1327 aaPredicted RBP16.17■□□□□ 0.18
SNED1-205ENST00000405547 DDX58O95786 925 aaKnown RBP16.17■□□□□ 0.18
SNED1-205ENST00000405547 FKBP5Q13451 457 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms