RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 PLCH2O75038 1416 aa13.25□□□□□ -0.29
TPT1P4-201ENST00000403538 C9orf84Q5VXU9 1444 aa13.25□□□□□ -0.29
TPT1P4-201ENST00000403538 ANKRD50Q9ULJ7 1429 aa13.25□□□□□ -0.29
TPT1P4-201ENST00000403538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.24□□□□□ -0.29
TPT1P4-201ENST00000403538 ANKRD30BQ9BXX2 1392 aa13.24□□□□□ -0.29
TPT1P4-201ENST00000403538 ZNF644Q9H582 1327 aaPredicted RBP13.24□□□□□ -0.29
TPT1P4-201ENST00000403538 ARID3CA6NKF2 412 aa13.24□□□□□ -0.29
TPT1P4-201ENST00000403538 RNF166Q96A37 237 aaPredicted RBP13.24□□□□□ -0.29
TPT1P4-201ENST00000403538 CHIC2Q9UKJ5 165 aa13.24□□□□□ -0.29
TPT1P4-201ENST00000403538 ZCCHC11Q5TAX3 1644 aaKnown RBP13.24□□□□□ -0.29
TPT1P4-201ENST00000403538 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
TPT1P4-201ENST00000403538 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
TPT1P4-201ENST00000403538 SIN3AQ96ST3 1273 aa13.22□□□□□ -0.29
TPT1P4-201ENST00000403538 ERCC6L2Q5T890 1561 aa13.22□□□□□ -0.29
TPT1P4-201ENST00000403538 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
TPT1P4-201ENST00000403538 RPRD2Q5VT52 1461 aaKnown RBP13.22□□□□□ -0.29
TPT1P4-201ENST00000403538 PLXNC1O60486 1568 aa13.21□□□□□ -0.29
TPT1P4-201ENST00000403538 SAMD9LQ8IVG5 1584 aa13.21□□□□□ -0.29
TPT1P4-201ENST00000403538 EFCAB2Q5VUJ9 269 aa13.21□□□□□ -0.29
TPT1P4-201ENST00000403538 RIMBP2O15034 1052 aa13.2□□□□□ -0.3
TPT1P4-201ENST00000403538 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
TPT1P4-201ENST00000403538 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
TPT1P4-201ENST00000403538 NEUROD1Q13562 356 aa13.19□□□□□ -0.3
TPT1P4-201ENST00000403538 KDM6BO15054 1643 aa13.19□□□□□ -0.3
TPT1P4-201ENST00000403538 ARHGAP5Q13017 1502 aa13.18□□□□□ -0.3
TPT1P4-201ENST00000403538 WDR7Q9Y4E6 1490 aa13.18□□□□□ -0.3
TPT1P4-201ENST00000403538 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
TPT1P4-201ENST00000403538 TTC37Q6PGP7 1564 aa13.18□□□□□ -0.3
TPT1P4-201ENST00000403538 PZPP20742 1482 aa13.17□□□□□ -0.3
TPT1P4-201ENST00000403538 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
TPT1P4-201ENST00000403538 KIF15Q9NS87 1388 aa13.17□□□□□ -0.3
TPT1P4-201ENST00000403538 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
TPT1P4-201ENST00000403538 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
TPT1P4-201ENST00000403538 DUOX2Q9NRD8 1548 aa13.15□□□□□ -0.3
TPT1P4-201ENST00000403538 ERBINQ96RT1 1412 aa13.14□□□□□ -0.31
TPT1P4-201ENST00000403538 VARS2Q5ST30 1063 aaKnown RBP13.14□□□□□ -0.31
TPT1P4-201ENST00000403538 ZNF687Q8N1G0 1237 aa13.14□□□□□ -0.31
TPT1P4-201ENST00000403538 ABCC1P33527 1531 aa13.13□□□□□ -0.31
TPT1P4-201ENST00000403538 UNC13BO14795 1591 aa13.12□□□□□ -0.31
TPT1P4-201ENST00000403538 PTGER2P43116 358 aa13.12□□□□□ -0.31
TPT1P4-201ENST00000403538 SYCP2Q9BX26 1530 aa13.12□□□□□ -0.31
TPT1P4-201ENST00000403538 ARHGEF12Q9NZN5 1544 aa13.12□□□□□ -0.31
TPT1P4-201ENST00000403538 ATP10AO60312 1499 aa13.11□□□□□ -0.31
TPT1P4-201ENST00000403538 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
TPT1P4-201ENST00000403538 MAGI2Q86UL8 1455 aa13.1□□□□□ -0.31
TPT1P4-201ENST00000403538 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
TPT1P4-201ENST00000403538 NUP155O75694 1391 aa13.1□□□□□ -0.31
TPT1P4-201ENST00000403538 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
TPT1P4-201ENST00000403538 CFAP74Q9C0B2 1584 aa13.08□□□□□ -0.32
TPT1P4-201ENST00000403538 UHRF1BP1Q6BDS2 1440 aa13.08□□□□□ -0.32
TPT1P4-201ENST00000403538 IQGAP3Q86VI3 1631 aa13.07□□□□□ -0.32
TPT1P4-201ENST00000403538 SPOCK2Q92563 424 aa13.07□□□□□ -0.32
TPT1P4-201ENST00000403538 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
TPT1P4-201ENST00000403538 ARID4BQ4LE39 1312 aaPredicted RBP13.07□□□□□ -0.32
TPT1P4-201ENST00000403538 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
TPT1P4-201ENST00000403538 PKD2Q13563 968 aa13.06□□□□□ -0.32
TPT1P4-201ENST00000403538 GPR153Q6NV75 609 aa13.06□□□□□ -0.32
TPT1P4-201ENST00000403538 FAM135AQ9P2D6 1515 aa13.06□□□□□ -0.32
TPT1P4-201ENST00000403538 ASXL2Q76L83 1435 aa13.05□□□□□ -0.32
TPT1P4-201ENST00000403538 KCNH8Q96L42 1107 aa13.04□□□□□ -0.32
TPT1P4-201ENST00000403538 CIZ1Q9ULV3 898 aaPredicted RBP13.04□□□□□ -0.32
TPT1P4-201ENST00000403538 FANCAO15360 1455 aa13.04□□□□□ -0.32
TPT1P4-201ENST00000403538 EIF2AK4Q9P2K8 1649 aaKnown RBP13.03□□□□□ -0.32
TPT1P4-201ENST00000403538 CCER2I3L3R5 266 aa13.03□□□□□ -0.32
TPT1P4-201ENST00000403538 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
TPT1P4-201ENST00000403538 MICALL2Q8IY33 904 aa13.02□□□□□ -0.33
TPT1P4-201ENST00000403538 EFCAB3Q8N7B9 438 aa13.02□□□□□ -0.33
TPT1P4-201ENST00000403538 SPAG9O60271 1321 aaKnown RBP13.02□□□□□ -0.33
TPT1P4-201ENST00000403538 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
TPT1P4-201ENST00000403538 POLR1AO95602 1720 aaPredicted RBP13□□□□□ -0.33
TPT1P4-201ENST00000403538 DEPDC5O75140 1603 aa13□□□□□ -0.33
TPT1P4-201ENST00000403538 INO80Q9ULG1 1556 aaPredicted RBP13□□□□□ -0.33
TPT1P4-201ENST00000403538 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
TPT1P4-201ENST00000403538 SPATA31E1Q6ZUB1 1445 aa13□□□□□ -0.33
TPT1P4-201ENST00000403538 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
TPT1P4-201ENST00000403538 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
TPT1P4-201ENST00000403538 NEO1Q92859 1461 aa12.99□□□□□ -0.33
TPT1P4-201ENST00000403538 ADGRL1O94910 1474 aa12.98□□□□□ -0.33
TPT1P4-201ENST00000403538 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
TPT1P4-201ENST00000403538 ATP7AQ04656 1500 aa12.98□□□□□ -0.33
TPT1P4-201ENST00000403538 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
TPT1P4-201ENST00000403538 DHX29Q7Z478 1369 aaKnown RBP12.97□□□□□ -0.33
TPT1P4-201ENST00000403538 RALGAPBQ86X10 1494 aa12.97□□□□□ -0.33
TPT1P4-201ENST00000403538 MLH3Q9UHC1 1453 aa12.97□□□□□ -0.33
TPT1P4-201ENST00000403538 KANK1Q14678 1352 aa12.96□□□□□ -0.33
TPT1P4-201ENST00000403538 GLI2P10070 1586 aa12.96□□□□□ -0.33
TPT1P4-201ENST00000403538 VWDEQ8N2E2 1590 aa12.96□□□□□ -0.33
TPT1P4-201ENST00000403538 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.34
TPT1P4-201ENST00000403538 ANP32CO43423 234 aa12.95□□□□□ -0.34
TPT1P4-201ENST00000403538 BCORL1Q5H9F3 1711 aa12.95□□□□□ -0.34
TPT1P4-201ENST00000403538 CD109Q6YHK3 1445 aa12.95□□□□□ -0.34
TPT1P4-201ENST00000403538 KDM5CP41229 1560 aa12.94□□□□□ -0.34
TPT1P4-201ENST00000403538 TET3O43151 1660 aa12.94□□□□□ -0.34
TPT1P4-201ENST00000403538 SOX12O15370 315 aa12.94□□□□□ -0.34
TPT1P4-201ENST00000403538 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
TPT1P4-201ENST00000403538 LAMC1P11047 1609 aa12.94□□□□□ -0.34
TPT1P4-201ENST00000403538 PTPRTO14522 1441 aa12.94□□□□□ -0.34
TPT1P4-201ENST00000403538 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
TPT1P4-201ENST00000403538 DDX10Q13206 875 aaKnown RBP12.93□□□□□ -0.34
TPT1P4-201ENST00000403538 LMTK2Q8IWU2 1503 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms