RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 PREX1Q8TCU6 1659 aa18.52■□□□□ 0.56
CEACAM1-206ENST00000403136 CFAP70Q5T0N1 1121 aa18.52■□□□□ 0.55
CEACAM1-206ENST00000403136 LAMC1P11047 1609 aa18.51■□□□□ 0.55
CEACAM1-206ENST00000403136 VGFO15240 615 aaPredicted RBP18.5■□□□□ 0.55
CEACAM1-206ENST00000403136 NRXN1Q9ULB1 1477 aa18.5■□□□□ 0.55
CEACAM1-206ENST00000403136 ANP32CO43423 234 aa18.48■□□□□ 0.55
CEACAM1-206ENST00000403136 C14orf93Q9H972 538 aaKnown RBP18.47■□□□□ 0.55
CEACAM1-206ENST00000403136 IFT172Q9UG01 1749 aa18.47■□□□□ 0.55
CEACAM1-206ENST00000403136 STAG3Q9UJ98 1225 aa18.47■□□□□ 0.55
CEACAM1-206ENST00000403136 SPATA31D1Q6ZQQ2 1576 aa18.46■□□□□ 0.55
CEACAM1-206ENST00000403136 TESK2Q96S53 571 aa18.46■□□□□ 0.55
CEACAM1-206ENST00000403136 SCAF11Q99590 1463 aaKnown RBP18.45■□□□□ 0.54
CEACAM1-206ENST00000403136 NUTM2DQ5VT03 806 aaPredicted RBP18.45■□□□□ 0.54
CEACAM1-206ENST00000403136 POLR3GLQ9BT43 218 aa18.45■□□□□ 0.54
CEACAM1-206ENST00000403136 KIAA1210Q9ULL0 1709 aa18.44■□□□□ 0.54
CEACAM1-206ENST00000403136 PIK3C2GO75747 1445 aa18.44■□□□□ 0.54
CEACAM1-206ENST00000403136 ZFYVE9O95405 1425 aa18.44■□□□□ 0.54
CEACAM1-206ENST00000403136 PPLO60437 1756 aa18.44■□□□□ 0.54
CEACAM1-206ENST00000403136 TMEM131LA2VDJ0 1609 aa18.43■□□□□ 0.54
CEACAM1-206ENST00000403136 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
CEACAM1-206ENST00000403136 POLR1AO95602 1720 aaPredicted RBP18.41■□□□□ 0.54
CEACAM1-206ENST00000403136 TMF1P82094 1093 aa18.4■□□□□ 0.54
CEACAM1-206ENST00000403136 TNRQ92752 1358 aa18.4■□□□□ 0.54
CEACAM1-206ENST00000403136 EIF3AQ14152 1382 aaKnown RBP18.38■□□□□ 0.53
CEACAM1-206ENST00000403136 CEBPAP49715 358 aaPredicted RBP18.38■□□□□ 0.53
CEACAM1-206ENST00000403136 A2ML1A8K2U0 1454 aa18.38■□□□□ 0.53
CEACAM1-206ENST00000403136 CCER2I3L3R5 266 aa18.37■□□□□ 0.53
CEACAM1-206ENST00000403136 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
CEACAM1-206ENST00000403136 TMEM132EQ6IEE7 984 aa18.37■□□□□ 0.53
CEACAM1-206ENST00000403136 IQGAP1P46940 1657 aa18.37■□□□□ 0.53
CEACAM1-206ENST00000403136 SETBP1Q9Y6X0 1596 aa18.36■□□□□ 0.53
CEACAM1-206ENST00000403136 DISP3Q9P2K9 1392 aa18.36■□□□□ 0.53
CEACAM1-206ENST00000403136 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
CEACAM1-206ENST00000403136 TRAK1Q9UPV9 953 aa18.34■□□□□ 0.53
CEACAM1-206ENST00000403136 YTHDC1Q96MU7 727 aaKnown RBP18.33■□□□□ 0.53
CEACAM1-206ENST00000403136 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
CEACAM1-206ENST00000403136 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
CEACAM1-206ENST00000403136 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
CEACAM1-206ENST00000403136 RIMS2Q9UQ26 1411 aa18.32■□□□□ 0.52
CEACAM1-206ENST00000403136 ADGRB1O14514 1584 aa18.32■□□□□ 0.52
CEACAM1-206ENST00000403136 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
CEACAM1-206ENST00000403136 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
CEACAM1-206ENST00000403136 SENP3Q9H4L4 574 aaPredicted RBP18.3■□□□□ 0.52
CEACAM1-206ENST00000403136 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
CEACAM1-206ENST00000403136 NLRP1Q9C000 1473 aa18.28■□□□□ 0.52
CEACAM1-206ENST00000403136 SBNO2Q9Y2G9 1366 aa18.27■□□□□ 0.52
CEACAM1-206ENST00000403136 FER1L4A9Z1Z3 1794 aa18.26■□□□□ 0.51
CEACAM1-206ENST00000403136 TMEM2Q9UHN6 1383 aa18.26■□□□□ 0.51
CEACAM1-206ENST00000403136 CENPBP07199 599 aaPredicted RBP18.25■□□□□ 0.51
CEACAM1-206ENST00000403136 C3P01024 1663 aa18.25■□□□□ 0.51
CEACAM1-206ENST00000403136 PER1O15534 1290 aaPredicted RBP18.25■□□□□ 0.51
CEACAM1-206ENST00000403136 PANK3Q9H999 370 aa18.25■□□□□ 0.51
CEACAM1-206ENST00000403136 STK26Q9P289 416 aa18.25■□□□□ 0.51
CEACAM1-206ENST00000403136 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
CEACAM1-206ENST00000403136 KDM5AP29375 1690 aaKnown RBP18.22■□□□□ 0.51
CEACAM1-206ENST00000403136 MYO3AQ8NEV4 1616 aa18.22■□□□□ 0.51
CEACAM1-206ENST00000403136 ASXL1Q8IXJ9 1541 aa18.21■□□□□ 0.51
CEACAM1-206ENST00000403136 YTHDC2Q9H6S0 1430 aaKnown RBP18.21■□□□□ 0.51
CEACAM1-206ENST00000403136 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
CEACAM1-206ENST00000403136 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
CEACAM1-206ENST00000403136 LTKP29376 864 aa18.19■□□□□ 0.5
CEACAM1-206ENST00000403136 CNGB1Q14028 1251 aaPredicted RBP18.19■□□□□ 0.5
CEACAM1-206ENST00000403136 TXNDC2Q86VQ3 553 aa18.19■□□□□ 0.5
CEACAM1-206ENST00000403136 BCANQ96GW7 911 aa18.18■□□□□ 0.5
CEACAM1-206ENST00000403136 EID1Q9Y6B2 187 aa18.18■□□□□ 0.5
CEACAM1-206ENST00000403136 PTPRMP28827 1452 aa18.17■□□□□ 0.5
CEACAM1-206ENST00000403136 PUS7Q96PZ0 661 aaKnown RBP18.17■□□□□ 0.5
CEACAM1-206ENST00000403136 RALBP1Q15311 655 aa18.17■□□□□ 0.5
CEACAM1-206ENST00000403136 CCDC184Q52MB2 194 aa18.17■□□□□ 0.5
CEACAM1-206ENST00000403136 PRAM1Q96QH2 718 aa18.17■□□□□ 0.5
CEACAM1-206ENST00000403136 POGKQ9P215 609 aa18.17■□□□□ 0.5
CEACAM1-206ENST00000403136 ADAMTSL3P82987 1691 aa18.16■□□□□ 0.5
CEACAM1-206ENST00000403136 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
CEACAM1-206ENST00000403136 KTN1Q86UP2 1357 aaKnown RBP18.16■□□□□ 0.5
CEACAM1-206ENST00000403136 SAFB2Q14151 953 aaKnown RBP eCLIP18.15■□□□□ 0.5
CEACAM1-206ENST00000403136 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
CEACAM1-206ENST00000403136 ABCC11Q96J66 1382 aa18.15■□□□□ 0.5
CEACAM1-206ENST00000403136 METP08581 1390 aa18.14■□□□□ 0.5
CEACAM1-206ENST00000403136 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
CEACAM1-206ENST00000403136 PLEKHG1Q9ULL1 1385 aa18.14■□□□□ 0.49
CEACAM1-206ENST00000403136 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
CEACAM1-206ENST00000403136 ARHGAP23Q9P227 1491 aa18.13■□□□□ 0.49
CEACAM1-206ENST00000403136 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
CEACAM1-206ENST00000403136 KNSTRNQ9Y448 316 aa18.13■□□□□ 0.49
CEACAM1-206ENST00000403136 QRICH2Q9H0J4 1663 aa18.13■□□□□ 0.49
CEACAM1-206ENST00000403136 SLIT1O75093 1534 aa18.12■□□□□ 0.49
CEACAM1-206ENST00000403136 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
CEACAM1-206ENST00000403136 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
CEACAM1-206ENST00000403136 ADAMTS13Q76LX8 1427 aa18.1■□□□□ 0.49
CEACAM1-206ENST00000403136 WAPLQ7Z5K2 1190 aa18.1■□□□□ 0.49
CEACAM1-206ENST00000403136 MINK1Q8N4C8 1332 aaPredicted RBP18.1■□□□□ 0.49
CEACAM1-206ENST00000403136 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
CEACAM1-206ENST00000403136 CC2D1BQ5T0F9 858 aaKnown RBP18.09■□□□□ 0.49
CEACAM1-206ENST00000403136 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
CEACAM1-206ENST00000403136 PARD3Q8TEW0 1356 aa18.09■□□□□ 0.49
CEACAM1-206ENST00000403136 MYBBP1AQ9BQG0 1328 aaKnown RBP18.09■□□□□ 0.49
CEACAM1-206ENST00000403136 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
CEACAM1-206ENST00000403136 SLC12A5Q9H2X9 1139 aa18.09■□□□□ 0.49
CEACAM1-206ENST00000403136 CABP2Q9NPB3 220 aa18.09■□□□□ 0.49
CEACAM1-206ENST00000403136 AMER1Q5JTC6 1135 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms