RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 DEPDC5O75140 1603 aa8.86□□□□□ -0.99
HMGB1P20-201ENST00000402555 ERVK-7P63135 1459 aa8.85□□□□□ -0.99
HMGB1P20-201ENST00000402555 PTPRTO14522 1441 aa8.85□□□□□ -0.99
HMGB1P20-201ENST00000402555 SPATA31D1Q6ZQQ2 1576 aa8.84□□□□□ -0.99
HMGB1P20-201ENST00000402555 ANKRD50Q9ULJ7 1429 aa8.84□□□□□ -0.99
HMGB1P20-201ENST00000402555 KANK1Q14678 1352 aa8.84□□□□□ -0.99
HMGB1P20-201ENST00000402555 PLA2R1Q13018 1463 aa8.83□□□□□ -1
HMGB1P20-201ENST00000402555 CERKQ8TCT0 537 aa8.83□□□□□ -1
HMGB1P20-201ENST00000402555 FBXO41Q8TF61 875 aa8.83□□□□□ -1
HMGB1P20-201ENST00000402555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.83□□□□□ -1
HMGB1P20-201ENST00000402555 NLRP1Q9C000 1473 aa8.83□□□□□ -1
HMGB1P20-201ENST00000402555 VWDEQ8N2E2 1590 aa8.82□□□□□ -1
HMGB1P20-201ENST00000402555 UGGT1Q9NYU2 1555 aa8.82□□□□□ -1
HMGB1P20-201ENST00000402555 ARHGAP31Q2M1Z3 1444 aa8.81□□□□□ -1
HMGB1P20-201ENST00000402555 PKD2Q13563 968 aa8.81□□□□□ -1
HMGB1P20-201ENST00000402555 NEURL4Q96JN8 1562 aa8.81□□□□□ -1
HMGB1P20-201ENST00000402555 ZNF335Q9H4Z2 1342 aaPredicted RBP8.8□□□□□ -1
HMGB1P20-201ENST00000402555 LMTK2Q8IWU2 1503 aa8.8□□□□□ -1
HMGB1P20-201ENST00000402555 LTBP4Q8N2S1 1624 aa8.8□□□□□ -1
HMGB1P20-201ENST00000402555 POLR1AO95602 1720 aaPredicted RBP8.8□□□□□ -1
HMGB1P20-201ENST00000402555 THEMISQ8N1K5 641 aaPredicted RBP8.8□□□□□ -1
HMGB1P20-201ENST00000402555 ROCK1Q13464 1354 aa8.8□□□□□ -1
HMGB1P20-201ENST00000402555 EFCAB6Q5THR3 1501 aa8.8□□□□□ -1
HMGB1P20-201ENST00000402555 RRBP1Q9P2E9 1410 aaKnown RBP8.8□□□□□ -1
HMGB1P20-201ENST00000402555 UNC13BO14795 1591 aa8.79□□□□□ -1
HMGB1P20-201ENST00000402555 MNX1P50219 401 aaPredicted RBP8.79□□□□□ -1
HMGB1P20-201ENST00000402555 ANKLE2Q86XL3 938 aa8.79□□□□□ -1
HMGB1P20-201ENST00000402555 UBR1Q8IWV7 1749 aa8.79□□□□□ -1
HMGB1P20-201ENST00000402555 SYNMO15061 1565 aa8.78□□□□□ -1
HMGB1P20-201ENST00000402555 PIK3C2BO00750 1634 aa8.78□□□□□ -1
HMGB1P20-201ENST00000402555 CLCN6P51797 869 aa8.77□□□□□ -1.01
HMGB1P20-201ENST00000402555 TET3O43151 1660 aa8.77□□□□□ -1.01
HMGB1P20-201ENST00000402555 NPHP4O75161 1426 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P20-201ENST00000402555 NOS1P29475 1434 aa8.77□□□□□ -1.01
HMGB1P20-201ENST00000402555 IDI1Q13907 227 aa8.76□□□□□ -1.01
HMGB1P20-201ENST00000402555 ZNF579Q8NAF0 562 aaKnown RBP8.76□□□□□ -1.01
HMGB1P20-201ENST00000402555 GCC2Q8IWJ2 1684 aa8.75□□□□□ -1.01
HMGB1P20-201ENST00000402555 NUP155O75694 1391 aa8.75□□□□□ -1.01
HMGB1P20-201ENST00000402555 LTKP29376 864 aa8.75□□□□□ -1.01
HMGB1P20-201ENST00000402555 IQGAP3Q86VI3 1631 aa8.75□□□□□ -1.01
HMGB1P20-201ENST00000402555 MED14O60244 1454 aa8.75□□□□□ -1.01
HMGB1P20-201ENST00000402555 E9PCH4 1651 aa8.75□□□□□ -1.01
HMGB1P20-201ENST00000402555 IQGAP1P46940 1657 aa8.75□□□□□ -1.01
HMGB1P20-201ENST00000402555 TXNDC2Q86VQ3 553 aa8.74□□□□□ -1.01
HMGB1P20-201ENST00000402555 ZRANB1Q9UGI0 708 aa8.74□□□□□ -1.01
HMGB1P20-201ENST00000402555 RPRD2Q5VT52 1461 aaKnown RBP8.74□□□□□ -1.01
HMGB1P20-201ENST00000402555 SCAF11Q99590 1463 aaKnown RBP8.74□□□□□ -1.01
HMGB1P20-201ENST00000402555 ARHGAP23Q9P227 1491 aa8.74□□□□□ -1.01
HMGB1P20-201ENST00000402555 SLIT1O75093 1534 aa8.74□□□□□ -1.01
HMGB1P20-201ENST00000402555 NAIPQ13075 1403 aa8.73□□□□□ -1.01
HMGB1P20-201ENST00000402555 ADGRB3O60242 1522 aa8.73□□□□□ -1.01
HMGB1P20-201ENST00000402555 MYO5BQ9ULV0 1848 aa8.73□□□□□ -1.01
HMGB1P20-201ENST00000402555 TMEM2Q9UHN6 1383 aa8.73□□□□□ -1.01
HMGB1P20-201ENST00000402555 STRCP1A6NGW2 1772 aa8.71□□□□□ -1.01
HMGB1P20-201ENST00000402555 CHGAP10645 457 aaKnown RBP8.71□□□□□ -1.02
HMGB1P20-201ENST00000402555 SLC52A1Q9NWF4 448 aa8.71□□□□□ -1.02
HMGB1P20-201ENST00000402555 EID1Q9Y6B2 187 aa8.71□□□□□ -1.02
HMGB1P20-201ENST00000402555 IQSEC2Q5JU85 1478 aa8.7□□□□□ -1.02
HMGB1P20-201ENST00000402555 KDM5AP29375 1690 aaKnown RBP8.7□□□□□ -1.02
HMGB1P20-201ENST00000402555 UBAP1LF5GYI3 381 aa8.7□□□□□ -1.02
HMGB1P20-201ENST00000402555 HFM1A2PYH4 1435 aa8.7□□□□□ -1.02
HMGB1P20-201ENST00000402555 CPS1P31327 1500 aa8.7□□□□□ -1.02
HMGB1P20-201ENST00000402555 TMEM131LA2VDJ0 1609 aa8.69□□□□□ -1.02
HMGB1P20-201ENST00000402555 POTEIP0CG38 1075 aa8.69□□□□□ -1.02
HMGB1P20-201ENST00000402555 NUTM2DQ5VT03 806 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P20-201ENST00000402555 TRIM52Q96A61 297 aa8.69□□□□□ -1.02
HMGB1P20-201ENST00000402555 BCANQ96GW7 911 aa8.68□□□□□ -1.02
HMGB1P20-201ENST00000402555 SLC26A8Q96RN1 970 aa8.68□□□□□ -1.02
HMGB1P20-201ENST00000402555 ZFYVE9O95405 1425 aa8.68□□□□□ -1.02
HMGB1P20-201ENST00000402555 RIMS2Q9UQ26 1411 aa8.68□□□□□ -1.02
HMGB1P20-201ENST00000402555 SPHKAPQ2M3C7 1700 aa8.68□□□□□ -1.02
HMGB1P20-201ENST00000402555 PAK3O75914 559 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P20-201ENST00000402555 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
HMGB1P20-201ENST00000402555 PPP1R15AO75807 674 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P20-201ENST00000402555 PIP4K2BP78356 416 aa8.65□□□□□ -1.02
HMGB1P20-201ENST00000402555 FKBP8Q14318 412 aa8.65□□□□□ -1.02
HMGB1P20-201ENST00000402555 CLTCL1P53675 1640 aa8.65□□□□□ -1.03
HMGB1P20-201ENST00000402555 PLEKHG1Q9ULL1 1385 aa8.64□□□□□ -1.03
HMGB1P20-201ENST00000402555 RBM33Q96EV2 1170 aaKnown RBP8.64□□□□□ -1.03
HMGB1P20-201ENST00000402555 ALKQ9UM73 1620 aa8.64□□□□□ -1.03
HMGB1P20-201ENST00000402555 TRPM2O94759 1503 aa8.64□□□□□ -1.03
HMGB1P20-201ENST00000402555 XIRP1Q702N8 1843 aaKnown RBP8.64□□□□□ -1.03
HMGB1P20-201ENST00000402555 GALR2O43603 387 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P20-201ENST00000402555 ZNF326Q5BKZ1 582 aaKnown RBP8.63□□□□□ -1.03
HMGB1P20-201ENST00000402555 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.03
HMGB1P20-201ENST00000402555 PHF12Q96QT6 1004 aa8.63□□□□□ -1.03
HMGB1P20-201ENST00000402555 TOM1O60784 492 aa8.62□□□□□ -1.03
HMGB1P20-201ENST00000402555 KCNA6P17658 529 aa8.62□□□□□ -1.03
HMGB1P20-201ENST00000402555 HDGFP51858 240 aaKnown RBP8.62□□□□□ -1.03
HMGB1P20-201ENST00000402555 ADAMTS13Q76LX8 1427 aa8.62□□□□□ -1.03
HMGB1P20-201ENST00000402555 TMEM94Q12767 1356 aa8.61□□□□□ -1.03
HMGB1P20-201ENST00000402555 HSPA1LP34931 641 aa8.61□□□□□ -1.03
HMGB1P20-201ENST00000402555 PROSER2Q86WR7 435 aaPredicted RBP8.61□□□□□ -1.03
HMGB1P20-201ENST00000402555 MIER1Q8N108 512 aa8.61□□□□□ -1.03
HMGB1P20-201ENST00000402555 DCBLD2Q96PD2 775 aa8.61□□□□□ -1.03
HMGB1P20-201ENST00000402555 SETD5Q9C0A6 1442 aa8.61□□□□□ -1.03
HMGB1P20-201ENST00000402555 CHD2O14647 1828 aaKnown RBP8.61□□□□□ -1.03
HMGB1P20-201ENST00000402555 KIF1BO60333 1816 aa8.61□□□□□ -1.03
HMGB1P20-201ENST00000402555 NWD1Q149M9 1564 aa8.61□□□□□ -1.03
HMGB1P20-201ENST00000402555 MPHOSPH9Q99550 1183 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms