RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 PPP2R1AP30153 589 aa18.58■□□□□ 0.56
ATG3-202ENST00000402314 ADGRL1O94910 1474 aa18.57■□□□□ 0.56
ATG3-202ENST00000402314 AMER1Q5JTC6 1135 aaPredicted RBP18.57■□□□□ 0.56
ATG3-202ENST00000402314 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
ATG3-202ENST00000402314 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
ATG3-202ENST00000402314 KANK1Q14678 1352 aa18.55■□□□□ 0.56
ATG3-202ENST00000402314 RTEL1-TNFRSF6BF6WH68 1400 aa18.55■□□□□ 0.56
ATG3-202ENST00000402314 GGT6Q6P531 493 aa18.55■□□□□ 0.56
ATG3-202ENST00000402314 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
ATG3-202ENST00000402314 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
ATG3-202ENST00000402314 ATP7AQ04656 1500 aa18.54■□□□□ 0.56
ATG3-202ENST00000402314 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
ATG3-202ENST00000402314 CCDC146Q8IYE0 955 aa18.54■□□□□ 0.56
ATG3-202ENST00000402314 PTPRTO14522 1441 aa18.54■□□□□ 0.56
ATG3-202ENST00000402314 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
ATG3-202ENST00000402314 TRPM2O94759 1503 aa18.53■□□□□ 0.56
ATG3-202ENST00000402314 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.56
ATG3-202ENST00000402314 LAMC1P11047 1609 aa18.52■□□□□ 0.56
ATG3-202ENST00000402314 WDR43Q15061 677 aaKnown RBP eCLIP18.52■□□□□ 0.55
ATG3-202ENST00000402314 SCAF11Q99590 1463 aaKnown RBP18.52■□□□□ 0.55
ATG3-202ENST00000402314 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
ATG3-202ENST00000402314 C20orf194Q5TEA3 1177 aa18.51■□□□□ 0.55
ATG3-202ENST00000402314 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
ATG3-202ENST00000402314 FRAT1Q92837 279 aaPredicted RBP18.5■□□□□ 0.55
ATG3-202ENST00000402314 RNF17Q9BXT8 1623 aaKnown RBP18.5■□□□□ 0.55
ATG3-202ENST00000402314 DAXXQ9UER7 740 aaPredicted RBP18.49■□□□□ 0.55
ATG3-202ENST00000402314 PLEKHH1Q9ULM0 1364 aa18.49■□□□□ 0.55
ATG3-202ENST00000402314 NFKBIBQ15653 356 aa18.49■□□□□ 0.55
ATG3-202ENST00000402314 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
ATG3-202ENST00000402314 SPHKAPQ2M3C7 1700 aa18.48■□□□□ 0.55
ATG3-202ENST00000402314 BLMP54132 1417 aaPredicted RBP18.48■□□□□ 0.55
ATG3-202ENST00000402314 GSE1Q14687 1217 aa18.48■□□□□ 0.55
ATG3-202ENST00000402314 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
ATG3-202ENST00000402314 TRAK1Q9UPV9 953 aa18.48■□□□□ 0.55
ATG3-202ENST00000402314 CFAP65Q6ZU64 1925 aaKnown RBP18.48■□□□□ 0.55
ATG3-202ENST00000402314 PPM1GO15355 546 aaPredicted RBP18.47■□□□□ 0.55
ATG3-202ENST00000402314 CARD14Q9BXL6 1004 aa18.47■□□□□ 0.55
ATG3-202ENST00000402314 TNNT2P45379 298 aaPredicted RBP18.47■□□□□ 0.55
ATG3-202ENST00000402314 ARXQ96QS3 562 aa18.47■□□□□ 0.55
ATG3-202ENST00000402314 CDCA8Q53HL2 280 aa18.46■□□□□ 0.55
ATG3-202ENST00000402314 NPM1P06748 294 aaKnown RBP eCLIP18.46■□□□□ 0.55
ATG3-202ENST00000402314 INO80Q9ULG1 1556 aaPredicted RBP18.45■□□□□ 0.54
ATG3-202ENST00000402314 IQGAP1P46940 1657 aa18.44■□□□□ 0.54
ATG3-202ENST00000402314 ABCA9Q8IUA7 1624 aa18.44■□□□□ 0.54
ATG3-202ENST00000402314 RAPGEF3O95398 923 aa18.44■□□□□ 0.54
ATG3-202ENST00000402314 TET3O43151 1660 aa18.44■□□□□ 0.54
ATG3-202ENST00000402314 ARAP3Q8WWN8 1544 aa18.43■□□□□ 0.54
ATG3-202ENST00000402314 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
ATG3-202ENST00000402314 CEP152O94986 1710 aa18.43■□□□□ 0.54
ATG3-202ENST00000402314 APAF1O14727 1248 aa18.43■□□□□ 0.54
ATG3-202ENST00000402314 DEPDC5O75140 1603 aa18.43■□□□□ 0.54
ATG3-202ENST00000402314 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
ATG3-202ENST00000402314 MROH1Q8NDA8 1641 aa18.42■□□□□ 0.54
ATG3-202ENST00000402314 NOS1P29475 1434 aa18.42■□□□□ 0.54
ATG3-202ENST00000402314 RGS3P49796 1198 aa18.41■□□□□ 0.54
ATG3-202ENST00000402314 DUSP27Q5VZP5 1158 aa18.41■□□□□ 0.54
ATG3-202ENST00000402314 EIF3AQ14152 1382 aaKnown RBP18.41■□□□□ 0.54
ATG3-202ENST00000402314 FRAT2O75474 233 aaPredicted RBP18.41■□□□□ 0.54
ATG3-202ENST00000402314 VWDEQ8N2E2 1590 aa18.4■□□□□ 0.54
ATG3-202ENST00000402314 SLC12A5Q9H2X9 1139 aa18.4■□□□□ 0.54
ATG3-202ENST00000402314 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
ATG3-202ENST00000402314 ERVK-7P63135 1459 aa18.39■□□□□ 0.53
ATG3-202ENST00000402314 ASXL1Q8IXJ9 1541 aa18.39■□□□□ 0.53
ATG3-202ENST00000402314 SAFB2Q14151 953 aaKnown RBP eCLIP18.39■□□□□ 0.53
ATG3-202ENST00000402314 STAC3Q96MF2 364 aa18.38■□□□□ 0.53
ATG3-202ENST00000402314 ZMYM4Q5VZL5 1548 aa18.38■□□□□ 0.53
ATG3-202ENST00000402314 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
ATG3-202ENST00000402314 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
ATG3-202ENST00000402314 KIDINS220Q9ULH0 1771 aa18.37■□□□□ 0.53
ATG3-202ENST00000402314 CD109Q6YHK3 1445 aa18.37■□□□□ 0.53
ATG3-202ENST00000402314 ABCA6Q8N139 1617 aa18.36■□□□□ 0.53
ATG3-202ENST00000402314 NEUROD2Q15784 382 aa18.36■□□□□ 0.53
ATG3-202ENST00000402314 PPRC1Q5VV67 1664 aaKnown RBP18.36■□□□□ 0.53
ATG3-202ENST00000402314 CENPJQ9HC77 1338 aaPredicted RBP18.36■□□□□ 0.53
ATG3-202ENST00000402314 NPATQ14207 1427 aa18.35■□□□□ 0.53
ATG3-202ENST00000402314 SYNMO15061 1565 aa18.35■□□□□ 0.53
ATG3-202ENST00000402314 EFCAB6Q5THR3 1501 aa18.35■□□□□ 0.53
ATG3-202ENST00000402314 ZNF521Q96K83 1311 aa18.34■□□□□ 0.53
ATG3-202ENST00000402314 MYOM1P52179 1685 aa18.34■□□□□ 0.53
ATG3-202ENST00000402314 MAP3K4Q9Y6R4 1608 aa18.34■□□□□ 0.53
ATG3-202ENST00000402314 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
ATG3-202ENST00000402314 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.53
ATG3-202ENST00000402314 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
ATG3-202ENST00000402314 DDRGK1Q96HY6 314 aa18.33■□□□□ 0.52
ATG3-202ENST00000402314 BCAR3O75815 825 aa18.32■□□□□ 0.52
ATG3-202ENST00000402314 MS4A1P11836 297 aa18.32■□□□□ 0.52
ATG3-202ENST00000402314 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
ATG3-202ENST00000402314 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
ATG3-202ENST00000402314 INSRP06213 1382 aa18.3■□□□□ 0.52
ATG3-202ENST00000402314 MYOM2P54296 1465 aa18.3■□□□□ 0.52
ATG3-202ENST00000402314 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
ATG3-202ENST00000402314 STK26Q9P289 416 aa18.3■□□□□ 0.52
ATG3-202ENST00000402314 C14orf93Q9H972 538 aaKnown RBP18.29■□□□□ 0.52
ATG3-202ENST00000402314 KDM5AP29375 1690 aaKnown RBP18.29■□□□□ 0.52
ATG3-202ENST00000402314 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
ATG3-202ENST00000402314 KIF1BO60333 1816 aa18.29■□□□□ 0.52
ATG3-202ENST00000402314 POGZQ7Z3K3 1410 aa18.28■□□□□ 0.52
ATG3-202ENST00000402314 UBE2Q2Q8WVN8 375 aa18.28■□□□□ 0.52
ATG3-202ENST00000402314 FRMPD1Q5SYB0 1578 aa18.27■□□□□ 0.52
ATG3-202ENST00000402314 CABP2Q9NPB3 220 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms