RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 A2MP01023 1474 aa11.72□□□□□ -0.53
HPS4-203ENST00000402105 U2SURPO15042 1029 aaKnown RBP11.72□□□□□ -0.53
HPS4-203ENST00000402105 ADGRL2O95490 1459 aa11.71□□□□□ -0.53
HPS4-203ENST00000402105 FAM135AQ9P2D6 1515 aa11.71□□□□□ -0.53
HPS4-203ENST00000402105 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
HPS4-203ENST00000402105 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
HPS4-203ENST00000402105 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.54
HPS4-203ENST00000402105 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.546e-11■■■■□ 21.2
HPS4-203ENST00000402105 WWC1Q8IX03 1113 aa11.71□□□□□ -0.54
HPS4-203ENST00000402105 KIF3BO15066 747 aa11.71□□□□□ -0.54
HPS4-203ENST00000402105 PCDHB15Q9Y5E8 787 aa11.71□□□□□ -0.54
HPS4-203ENST00000402105 POLR1AO95602 1720 aaPredicted RBP11.7□□□□□ -0.54
HPS4-203ENST00000402105 RLBP1P12271 317 aa11.7□□□□□ -0.54
HPS4-203ENST00000402105 TCP11L2Q8N4U5 519 aa11.7□□□□□ -0.54
HPS4-203ENST00000402105 CGNL1Q0VF96 1302 aa11.7□□□□□ -0.54
HPS4-203ENST00000402105 SLC12A5Q9H2X9 1139 aa11.7□□□□□ -0.54
HPS4-203ENST00000402105 ARHGEF12Q9NZN5 1544 aa11.7□□□□□ -0.54
HPS4-203ENST00000402105 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
HPS4-203ENST00000402105 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
HPS4-203ENST00000402105 RSPH4AQ5TD94 716 aa11.69□□□□□ -0.54
HPS4-203ENST00000402105 HSP90AA1P07900 732 aaKnown RBP11.69□□□□□ -0.54
HPS4-203ENST00000402105 TMEM132EQ6IEE7 984 aa11.69□□□□□ -0.54
HPS4-203ENST00000402105 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
HPS4-203ENST00000402105 CARD14Q9BXL6 1004 aa11.69□□□□□ -0.54
HPS4-203ENST00000402105 IFT140Q96RY7 1462 aa11.69□□□□□ -0.54
HPS4-203ENST00000402105 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
HPS4-203ENST00000402105 ZMYM4Q5VZL5 1548 aa11.68□□□□□ -0.54
HPS4-203ENST00000402105 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
HPS4-203ENST00000402105 MAPK8IP3Q9UPT6 1336 aa11.68□□□□□ -0.54
HPS4-203ENST00000402105 ARHGAP5Q13017 1502 aa11.67□□□□□ -0.54
HPS4-203ENST00000402105 PLA2R1Q13018 1463 aa11.67□□□□□ -0.54
HPS4-203ENST00000402105 PANK2Q9BZ23 570 aa11.67□□□□□ -0.54
HPS4-203ENST00000402105 CCDC141Q6ZP82 1450 aa11.67□□□□□ -0.54
HPS4-203ENST00000402105 GOLGA6L3A6NEY3 463 aa11.67□□□□□ -0.54
HPS4-203ENST00000402105 MTHFSP49914 203 aa11.67□□□□□ -0.54
HPS4-203ENST00000402105 RWDD1Q9H446 243 aaPredicted RBP11.67□□□□□ -0.54
HPS4-203ENST00000402105 ZNF521Q96K83 1311 aa11.66□□□□□ -0.54
HPS4-203ENST00000402105 NKTRP30414 1462 aaKnown RBP11.66□□□□□ -0.54
HPS4-203ENST00000402105 PMFBP1Q8TBY8 1022 aa11.66□□□□□ -0.54
HPS4-203ENST00000402105 SMC4Q9NTJ3 1288 aa11.66□□□□□ -0.54
HPS4-203ENST00000402105 SPAG9O60271 1321 aaKnown RBP11.66□□□□□ -0.54
HPS4-203ENST00000402105 ITSN2Q9NZM3 1697 aa11.66□□□□□ -0.54
HPS4-203ENST00000402105 EFCAB2Q5VUJ9 269 aa11.66□□□□□ -0.54
HPS4-203ENST00000402105 USP19O94966 1318 aa11.65□□□□□ -0.54
HPS4-203ENST00000402105 RARSP54136 660 aaKnown RBP11.65□□□□□ -0.54
HPS4-203ENST00000402105 PDE3AQ14432 1141 aa11.65□□□□□ -0.54
HPS4-203ENST00000402105 RRAGDQ9NQL2 400 aaPredicted RBP11.65□□□□□ -0.54
HPS4-203ENST00000402105 ADGBQ8N7X0 1667 aa11.65□□□□□ -0.55
HPS4-203ENST00000402105 L1TD1Q5T7N2 865 aaKnown RBP11.64□□□□□ -0.55
HPS4-203ENST00000402105 ADGRF5Q8IZF2 1346 aa11.64□□□□□ -0.55
HPS4-203ENST00000402105 FAM43AQ8N2R8 423 aa11.64□□□□□ -0.55
HPS4-203ENST00000402105 KDM5DQ9BY66 1539 aa11.64□□□□□ -0.55
HPS4-203ENST00000402105 STK26Q9P289 416 aa11.64□□□□□ -0.55
HPS4-203ENST00000402105 CFAP53Q96M91 514 aa11.63□□□□□ -0.55
HPS4-203ENST00000402105 C22orf23Q9BZE7 217 aa11.63□□□□□ -0.55
HPS4-203ENST00000402105 SYNJ2O15056 1496 aa11.63□□□□□ -0.55
HPS4-203ENST00000402105 GPRASP1Q5JY77 1395 aa11.62□□□□□ -0.55
HPS4-203ENST00000402105 GGT6Q6P531 493 aa11.62□□□□□ -0.55
HPS4-203ENST00000402105 RUNDC1Q96C34 613 aa11.62□□□□□ -0.55
HPS4-203ENST00000402105 SYCP2Q9BX26 1530 aa11.62□□□□□ -0.55
HPS4-203ENST00000402105 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
HPS4-203ENST00000402105 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
HPS4-203ENST00000402105 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
HPS4-203ENST00000402105 HSCBQ8IWL3 235 aa11.62□□□□□ -0.55
HPS4-203ENST00000402105 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
HPS4-203ENST00000402105 PNNQ9H307 717 aaKnown RBP11.62□□□□□ -0.55
HPS4-203ENST00000402105 ABCC10Q5T3U5 1492 aa11.61□□□□□ -0.55
HPS4-203ENST00000402105 EIF3AQ14152 1382 aaKnown RBP11.61□□□□□ -0.55
HPS4-203ENST00000402105 TRAK2O60296 914 aa11.61□□□□□ -0.55
HPS4-203ENST00000402105 WDR7Q9Y4E6 1490 aa11.61□□□□□ -0.55
HPS4-203ENST00000402105 XRCC6P12956 609 aaKnown RBP eCLIP11.61□□□□□ -0.556e-6■■■■■ 31.4
HPS4-203ENST00000402105 DZIP1LQ8IYY4 767 aaKnown RBP11.61□□□□□ -0.55
HPS4-203ENST00000402105 TRMT2AQ8IZ69 625 aaKnown RBP11.61□□□□□ -0.55
HPS4-203ENST00000402105 HSP90AB1P08238 724 aaKnown RBP11.6□□□□□ -0.55
HPS4-203ENST00000402105 EXOSC9Q06265 439 aaKnown RBP11.6□□□□□ -0.55
HPS4-203ENST00000402105 MCM4P33991 863 aa11.6□□□□□ -0.55
HPS4-203ENST00000402105 ZKSCAN2Q63HK3 967 aa11.6□□□□□ -0.55
HPS4-203ENST00000402105 TBC1D32Q96NH3 1257 aa11.59□□□□□ -0.55
HPS4-203ENST00000402105 NCLP19338 710 aaKnown RBP11.59□□□□□ -0.55
HPS4-203ENST00000402105 MYH16Q9H6N6 1097 aa11.59□□□□□ -0.55
HPS4-203ENST00000402105 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
HPS4-203ENST00000402105 TRIM44Q96DX7 344 aaPredicted RBP11.58□□□□□ -0.56
HPS4-203ENST00000402105 GGNBP2Q9H3C7 697 aa11.58□□□□□ -0.56
HPS4-203ENST00000402105 C1orf115Q9H7X2 142 aa11.58□□□□□ -0.56
HPS4-203ENST00000402105 CABP2Q9NPB3 220 aa11.58□□□□□ -0.56
HPS4-203ENST00000402105 TRPM1Q7Z4N2 1603 aa11.58□□□□□ -0.56
HPS4-203ENST00000402105 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
HPS4-203ENST00000402105 APBB1O00213 710 aa11.57□□□□□ -0.56
HPS4-203ENST00000402105 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
HPS4-203ENST00000402105 ASXL1Q8IXJ9 1541 aa11.57□□□□□ -0.56
HPS4-203ENST00000402105 NOB1Q9ULX3 412 aaKnown RBP11.57□□□□□ -0.56
HPS4-203ENST00000402105 CDC42BPAQ5VT25 1732 aa11.57□□□□□ -0.56
HPS4-203ENST00000402105 MVPQ14764 893 aaKnown RBP11.57□□□□□ -0.56
HPS4-203ENST00000402105 CHMP5Q9NZZ3 219 aa11.57□□□□□ -0.56
HPS4-203ENST00000402105 ZBTB7CA1YPR0 619 aa11.56□□□□□ -0.56
HPS4-203ENST00000402105 NSD3Q9BZ95 1437 aa11.56□□□□□ -0.56
HPS4-203ENST00000402105 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
HPS4-203ENST00000402105 ANKRD45Q5TZF3 282 aa11.56□□□□□ -0.56
HPS4-203ENST00000402105 SCAF11Q99590 1463 aaKnown RBP11.55□□□□□ -0.56
HPS4-203ENST00000402105 FBLN1P23142 703 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms