RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 SCAF11Q99590 1463 aaKnown RBP16.91■□□□□ 0.3
CLIP4-203ENST00000401617 RPGRIP1LQ68CZ1 1315 aa16.89■□□□□ 0.29
CLIP4-203ENST00000401617 ADGRF5Q8IZF2 1346 aa16.89■□□□□ 0.29
CLIP4-203ENST00000401617 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
CLIP4-203ENST00000401617 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
CLIP4-203ENST00000401617 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
CLIP4-203ENST00000401617 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
CLIP4-203ENST00000401617 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
CLIP4-203ENST00000401617 SETBP1Q9Y6X0 1596 aa16.87■□□□□ 0.29
CLIP4-203ENST00000401617 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
CLIP4-203ENST00000401617 TMF1P82094 1093 aa16.85■□□□□ 0.29
CLIP4-203ENST00000401617 KTN1Q86UP2 1357 aaKnown RBP16.85■□□□□ 0.29
CLIP4-203ENST00000401617 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
CLIP4-203ENST00000401617 CFAP70Q5T0N1 1121 aa16.84■□□□□ 0.29
CLIP4-203ENST00000401617 SLC52A1Q9NWF4 448 aa16.83■□□□□ 0.28
CLIP4-203ENST00000401617 EIF3AQ14152 1382 aaKnown RBP16.83■□□□□ 0.28
CLIP4-203ENST00000401617 NEXMIFQ5QGS0 1516 aa16.83■□□□□ 0.28
CLIP4-203ENST00000401617 MYO3AQ8NEV4 1616 aa16.82■□□□□ 0.28
CLIP4-203ENST00000401617 PER1O15534 1290 aaPredicted RBP16.82■□□□□ 0.28
CLIP4-203ENST00000401617 CHGAP10645 457 aaKnown RBP16.81■□□□□ 0.28
CLIP4-203ENST00000401617 IDI1Q13907 227 aa16.81■□□□□ 0.28
CLIP4-203ENST00000401617 C14orf93Q9H972 538 aaKnown RBP16.81■□□□□ 0.28
CLIP4-203ENST00000401617 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
CLIP4-203ENST00000401617 TMEM131LA2VDJ0 1609 aa16.81■□□□□ 0.28
CLIP4-203ENST00000401617 MYO5BQ9ULV0 1848 aa16.8■□□□□ 0.28
CLIP4-203ENST00000401617 ZFYVE9O95405 1425 aa16.8■□□□□ 0.28
CLIP4-203ENST00000401617 ADGRB1O14514 1584 aa16.79■□□□□ 0.28
CLIP4-203ENST00000401617 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
CLIP4-203ENST00000401617 CLTCQ00610 1675 aaKnown RBP16.79■□□□□ 0.28
CLIP4-203ENST00000401617 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
CLIP4-203ENST00000401617 RALBP1Q15311 655 aa16.78■□□□□ 0.28
CLIP4-203ENST00000401617 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.28
CLIP4-203ENST00000401617 CDCA8Q53HL2 280 aa16.77■□□□□ 0.28
CLIP4-203ENST00000401617 PARD3Q8TEW0 1356 aa16.76■□□□□ 0.27
CLIP4-203ENST00000401617 SPATA31D1Q6ZQQ2 1576 aa16.76■□□□□ 0.27
CLIP4-203ENST00000401617 MYOM1P52179 1685 aa16.76■□□□□ 0.27
CLIP4-203ENST00000401617 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
CLIP4-203ENST00000401617 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
CLIP4-203ENST00000401617 HNRNPUQ00839 825 aaKnown RBP eCLIP16.74■□□□□ 0.27
CLIP4-203ENST00000401617 PANK3Q9H999 370 aa16.74■□□□□ 0.27
CLIP4-203ENST00000401617 MYBBP1AQ9BQG0 1328 aaKnown RBP16.74■□□□□ 0.27
CLIP4-203ENST00000401617 BRD4O60885 1362 aaPredicted RBP16.73■□□□□ 0.27
CLIP4-203ENST00000401617 FBXO31Q5XUX0 539 aaPredicted RBP16.73■□□□□ 0.27
CLIP4-203ENST00000401617 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
CLIP4-203ENST00000401617 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
CLIP4-203ENST00000401617 QRICH2Q9H0J4 1663 aa16.69■□□□□ 0.26
CLIP4-203ENST00000401617 ARHGEF28Q8N1W1 1705 aaKnown RBP16.69■□□□□ 0.26
CLIP4-203ENST00000401617 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
CLIP4-203ENST00000401617 LRPPRCP42704 1394 aaKnown RBP16.68■□□□□ 0.26
CLIP4-203ENST00000401617 ZBED9Q6R2W3 1325 aa16.67■□□□□ 0.26
CLIP4-203ENST00000401617 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
CLIP4-203ENST00000401617 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
CLIP4-203ENST00000401617 NLRP13Q86W25 1043 aa16.67■□□□□ 0.26
CLIP4-203ENST00000401617 ASXL1Q8IXJ9 1541 aa16.66■□□□□ 0.26
CLIP4-203ENST00000401617 NPC1L1Q9UHC9 1359 aa16.66■□□□□ 0.26
CLIP4-203ENST00000401617 TMEM132EQ6IEE7 984 aa16.66■□□□□ 0.26
CLIP4-203ENST00000401617 A2ML1A8K2U0 1454 aa16.66■□□□□ 0.26
CLIP4-203ENST00000401617 ZMYM3Q14202 1370 aa16.65■□□□□ 0.26
CLIP4-203ENST00000401617 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
CLIP4-203ENST00000401617 MLECQ14165 292 aa16.64■□□□□ 0.25
CLIP4-203ENST00000401617 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
CLIP4-203ENST00000401617 NUTM2DQ5VT03 806 aaPredicted RBP16.64■□□□□ 0.25
CLIP4-203ENST00000401617 PUS7Q96PZ0 661 aaKnown RBP16.62■□□□□ 0.25
CLIP4-203ENST00000401617 KNSTRNQ9Y448 316 aa16.62■□□□□ 0.25
CLIP4-203ENST00000401617 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
CLIP4-203ENST00000401617 ALKQ9UM73 1620 aa16.61■□□□□ 0.25
CLIP4-203ENST00000401617 CC2D1BQ5T0F9 858 aaKnown RBP16.61■□□□□ 0.25
CLIP4-203ENST00000401617 INSRP06213 1382 aa16.6■□□□□ 0.25
CLIP4-203ENST00000401617 SETD1AO15047 1707 aaKnown RBP16.59■□□□□ 0.25
CLIP4-203ENST00000401617 RIMS2Q9UQ26 1411 aa16.58■□□□□ 0.25
CLIP4-203ENST00000401617 ESF1Q9H501 851 aaKnown RBP16.58■□□□□ 0.24
CLIP4-203ENST00000401617 TULP4Q9NRJ4 1543 aa16.58■□□□□ 0.24
CLIP4-203ENST00000401617 PTPRMP28827 1452 aa16.57■□□□□ 0.24
CLIP4-203ENST00000401617 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
CLIP4-203ENST00000401617 YTHDC2Q9H6S0 1430 aaKnown RBP16.57■□□□□ 0.24
CLIP4-203ENST00000401617 CARD14Q9BXL6 1004 aa16.56■□□□□ 0.24
CLIP4-203ENST00000401617 TNRQ92752 1358 aa16.55■□□□□ 0.24
CLIP4-203ENST00000401617 NRXN3Q9Y4C0 1643 aa16.54■□□□□ 0.24
CLIP4-203ENST00000401617 EVC2Q86UK5 1308 aa16.54■□□□□ 0.24
CLIP4-203ENST00000401617 PPP2R1AP30153 589 aa16.54■□□□□ 0.24
CLIP4-203ENST00000401617 USP32Q8NFA0 1604 aa16.54■□□□□ 0.24
CLIP4-203ENST00000401617 UBR1Q8IWV7 1749 aa16.53■□□□□ 0.24
CLIP4-203ENST00000401617 DLC1Q96QB1 1528 aa16.53■□□□□ 0.24
CLIP4-203ENST00000401617 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
CLIP4-203ENST00000401617 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
CLIP4-203ENST00000401617 BLMP54132 1417 aaPredicted RBP16.51■□□□□ 0.23
CLIP4-203ENST00000401617 FKBP8Q14318 412 aa16.5■□□□□ 0.23
CLIP4-203ENST00000401617 SLC12A5Q9H2X9 1139 aa16.5■□□□□ 0.23
CLIP4-203ENST00000401617 STK26Q9P289 416 aa16.5■□□□□ 0.23
CLIP4-203ENST00000401617 NEFLP07196 543 aa16.49■□□□□ 0.23
CLIP4-203ENST00000401617 NLRP1Q9C000 1473 aa16.49■□□□□ 0.23
CLIP4-203ENST00000401617 C3P01024 1663 aa16.49■□□□□ 0.23
CLIP4-203ENST00000401617 NINLQ9Y2I6 1382 aa16.48■□□□□ 0.23
CLIP4-203ENST00000401617 FER1L4A9Z1Z3 1794 aa16.48■□□□□ 0.23
CLIP4-203ENST00000401617 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
CLIP4-203ENST00000401617 NSD3Q9BZ95 1437 aa16.47■□□□□ 0.23
CLIP4-203ENST00000401617 PRAM1Q96QH2 718 aa16.47■□□□□ 0.23
CLIP4-203ENST00000401617 ANKRD36BQ8N2N9 1353 aa16.47■□□□□ 0.23
CLIP4-203ENST00000401617 TMEM2Q9UHN6 1383 aa16.47■□□□□ 0.23
CLIP4-203ENST00000401617 HDGFP51858 240 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms