RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 CCDC141Q6ZP82 1450 aa23.73■■□□□ 1.39
GAREM2-201ENST00000401533 GGNBP2Q9H3C7 697 aa23.72■■□□□ 1.39
GAREM2-201ENST00000401533 ADCY10Q96PN6 1610 aa23.7■■□□□ 1.39
GAREM2-201ENST00000401533 VGFO15240 615 aaPredicted RBP23.7■■□□□ 1.38
GAREM2-201ENST00000401533 PAK3O75914 559 aaPredicted RBP23.7■■□□□ 1.38
GAREM2-201ENST00000401533 TERF2IPQ9NYB0 399 aa23.7■■□□□ 1.38
GAREM2-201ENST00000401533 RAPGEF3O95398 923 aa23.69■■□□□ 1.38
GAREM2-201ENST00000401533 PANK1Q8TE04 598 aa23.69■■□□□ 1.38
GAREM2-201ENST00000401533 SHANK2Q9UPX8 1470 aa23.68■■□□□ 1.38
GAREM2-201ENST00000401533 E9PSI1 815 aa23.67■■□□□ 1.38
GAREM2-201ENST00000401533 MTHFSP49914 203 aa23.67■■□□□ 1.38
GAREM2-201ENST00000401533 ADGBQ8N7X0 1667 aa23.66■■□□□ 1.38
GAREM2-201ENST00000401533 CGNL1Q0VF96 1302 aa23.66■■□□□ 1.38
GAREM2-201ENST00000401533 TPRNQ4KMQ1 711 aa23.66■■□□□ 1.38
GAREM2-201ENST00000401533 MSH5O43196 834 aa23.65■■□□□ 1.38
GAREM2-201ENST00000401533 BCAR3O75815 825 aa23.65■■□□□ 1.38
GAREM2-201ENST00000401533 CDC42BPAQ5VT25 1732 aa23.64■■□□□ 1.38
GAREM2-201ENST00000401533 EVC2Q86UK5 1308 aa23.64■■□□□ 1.38
GAREM2-201ENST00000401533 MBD5Q9P267 1494 aa23.64■■□□□ 1.37
GAREM2-201ENST00000401533 CENPQQ7L2Z9 268 aaPredicted RBP23.63■■□□□ 1.37
GAREM2-201ENST00000401533 RWDD1Q9H446 243 aaPredicted RBP23.62■■□□□ 1.37
GAREM2-201ENST00000401533 CHD1O14646 1710 aa23.62■■□□□ 1.37
GAREM2-201ENST00000401533 PLEKHH2Q8IVE3 1493 aa23.62■■□□□ 1.37
GAREM2-201ENST00000401533 MS4A1P11836 297 aa23.62■■□□□ 1.37
GAREM2-201ENST00000401533 MFAP1P55081 439 aaKnown RBP23.61■■□□□ 1.37
GAREM2-201ENST00000401533 SYCP2Q9BX26 1530 aa23.61■■□□□ 1.37
GAREM2-201ENST00000401533 ERBINQ96RT1 1412 aa23.61■■□□□ 1.37
GAREM2-201ENST00000401533 C20orf194Q5TEA3 1177 aa23.6■■□□□ 1.37
GAREM2-201ENST00000401533 TCP11L2Q8N4U5 519 aa23.6■■□□□ 1.37
GAREM2-201ENST00000401533 PNNQ9H307 717 aaKnown RBP23.6■■□□□ 1.37
GAREM2-201ENST00000401533 SMG6Q86US8 1419 aaKnown RBP23.59■■□□□ 1.37
GAREM2-201ENST00000401533 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
GAREM2-201ENST00000401533 TRHP20396 242 aaPredicted RBP23.59■■□□□ 1.37
GAREM2-201ENST00000401533 SPATA31E1Q6ZUB1 1445 aa23.59■■□□□ 1.37
GAREM2-201ENST00000401533 NCLP19338 710 aaKnown RBP23.57■■□□□ 1.36
GAREM2-201ENST00000401533 ABCC2Q92887 1545 aa23.56■■□□□ 1.36
GAREM2-201ENST00000401533 FAM69CQ0P6D2 419 aa23.56■■□□□ 1.36
GAREM2-201ENST00000401533 FAM161AQ3B820 660 aa23.56■■□□□ 1.36
GAREM2-201ENST00000401533 IPO8O15397 1037 aaKnown RBP23.55■■□□□ 1.36
GAREM2-201ENST00000401533 HMOX1P09601 288 aa23.55■■□□□ 1.36
GAREM2-201ENST00000401533 GZF1Q9H116 711 aaPredicted RBP23.55■■□□□ 1.36
GAREM2-201ENST00000401533 SAMD9LQ8IVG5 1584 aa23.55■■□□□ 1.36
GAREM2-201ENST00000401533 CROCC2H7BZ55 1655 aa23.54■■□□□ 1.36
GAREM2-201ENST00000401533 DISP3Q9P2K9 1392 aa23.54■■□□□ 1.36
GAREM2-201ENST00000401533 PMFBP1Q8TBY8 1022 aa23.54■■□□□ 1.36
GAREM2-201ENST00000401533 RUNDC1Q96C34 613 aa23.53■■□□□ 1.36
GAREM2-201ENST00000401533 ADGRF5Q8IZF2 1346 aa23.53■■□□□ 1.36
GAREM2-201ENST00000401533 RIPK4P57078 832 aa23.52■■□□□ 1.36
GAREM2-201ENST00000401533 ARHGEF5Q12774 1597 aa23.52■■□□□ 1.36
GAREM2-201ENST00000401533 HSP90AB1P08238 724 aaKnown RBP23.52■■□□□ 1.36
GAREM2-201ENST00000401533 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.52■■□□□ 1.35
GAREM2-201ENST00000401533 FAM135AQ9P2D6 1515 aa23.52■■□□□ 1.35
GAREM2-201ENST00000401533 LTV1Q96GA3 475 aaPredicted RBP23.51■■□□□ 1.35
GAREM2-201ENST00000401533 ANP32BQ92688 251 aaKnown RBP23.51■■□□□ 1.35
GAREM2-201ENST00000401533 HDGFP51858 240 aaKnown RBP23.5■■□□□ 1.35
GAREM2-201ENST00000401533 TTC37Q6PGP7 1564 aa23.49■■□□□ 1.35
GAREM2-201ENST00000401533 TSR2Q969E8 191 aaKnown RBP23.49■■□□□ 1.35
GAREM2-201ENST00000401533 PLCH2O75038 1416 aa23.49■■□□□ 1.35
GAREM2-201ENST00000401533 FOXD4L1Q9NU39 408 aa23.49■■□□□ 1.35
GAREM2-201ENST00000401533 A0A0G2JS52 829 aa23.48■■□□□ 1.35
GAREM2-201ENST00000401533 ZKSCAN2Q63HK3 967 aa23.48■■□□□ 1.35
GAREM2-201ENST00000401533 DIAPH1O60610 1272 aaKnown RBP23.47■■□□□ 1.35
GAREM2-201ENST00000401533 SLC4A10Q6U841 1118 aa23.47■■□□□ 1.35
GAREM2-201ENST00000401533 RTF1Q92541 710 aaKnown RBP23.47■■□□□ 1.35
GAREM2-201ENST00000401533 STAC3Q96MF2 364 aa23.47■■□□□ 1.35
GAREM2-201ENST00000401533 PRAM1Q96QH2 718 aa23.47■■□□□ 1.35
GAREM2-201ENST00000401533 PREX2Q70Z35 1606 aa23.46■■□□□ 1.35
GAREM2-201ENST00000401533 RALGAPBQ86X10 1494 aa23.46■■□□□ 1.35
GAREM2-201ENST00000401533 HSCBQ8IWL3 235 aa23.46■■□□□ 1.35
GAREM2-201ENST00000401533 UHRF1BP1Q6BDS2 1440 aa23.44■■□□□ 1.34
GAREM2-201ENST00000401533 NGDNQ8NEJ9 315 aaKnown RBP23.44■■□□□ 1.34
GAREM2-201ENST00000401533 TRAPPC8Q9Y2L5 1435 aa23.43■■□□□ 1.34
GAREM2-201ENST00000401533 CDC42BPBQ9Y5S2 1711 aa23.42■■□□□ 1.34
GAREM2-201ENST00000401533 DZIP1LQ8IYY4 767 aaKnown RBP23.42■■□□□ 1.34
GAREM2-201ENST00000401533 ARHGEF12Q9NZN5 1544 aa23.41■■□□□ 1.34
GAREM2-201ENST00000401533 ANKRD45Q5TZF3 282 aa23.4■■□□□ 1.34
GAREM2-201ENST00000401533 BACH2Q9BYV9 841 aa23.4■■□□□ 1.34
GAREM2-201ENST00000401533 DHX29Q7Z478 1369 aaKnown RBP23.39■■□□□ 1.34
GAREM2-201ENST00000401533 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.33
GAREM2-201ENST00000401533 EXOSC9Q06265 439 aaKnown RBP23.39■■□□□ 1.33
GAREM2-201ENST00000401533 COG3Q96JB2 828 aa23.39■■□□□ 1.33
GAREM2-201ENST00000401533 TESK2Q96S53 571 aa23.38■■□□□ 1.33
GAREM2-201ENST00000401533 CABP1Q9NZU7 370 aa23.38■■□□□ 1.33
GAREM2-201ENST00000401533 CHMP4BQ9H444 224 aaKnown RBP23.38■■□□□ 1.33
GAREM2-201ENST00000401533 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
GAREM2-201ENST00000401533 LNPKQ9C0E8 428 aa23.36■■□□□ 1.33
GAREM2-201ENST00000401533 DUOX2Q9NRD8 1548 aa23.36■■□□□ 1.33
GAREM2-201ENST00000401533 AMPHP49418 695 aa23.36■■□□□ 1.33
GAREM2-201ENST00000401533 CASC1Q6TDU7 716 aa23.36■■□□□ 1.33
GAREM2-201ENST00000401533 SLFN5Q08AF3 891 aa23.36■■□□□ 1.33
GAREM2-201ENST00000401533 NECTIN2Q92692 538 aa23.36■■□□□ 1.33
GAREM2-201ENST00000401533 GOLGA6L22H0YM25 854 aa23.35■■□□□ 1.33
GAREM2-201ENST00000401533 OS9Q13438 667 aaPredicted RBP23.35■■□□□ 1.33
GAREM2-201ENST00000401533 PRAG1Q86YV5 1406 aa23.35■■□□□ 1.33
GAREM2-201ENST00000401533 CALD1Q05682 793 aaKnown RBP23.35■■□□□ 1.33
GAREM2-201ENST00000401533 TXNDC2Q86VQ3 553 aa23.34■■□□□ 1.33
GAREM2-201ENST00000401533 WWC1Q8IX03 1113 aa23.34■■□□□ 1.33
GAREM2-201ENST00000401533 MYO5CQ9NQX4 1742 aa23.33■■□□□ 1.33
GAREM2-201ENST00000401533 PRKAR2BP31323 418 aa23.32■■□□□ 1.32
GAREM2-201ENST00000401533 NUTM2GQ5VZR2 741 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms