RNA–Protein interactions for RNA: ENST00000400960.6

CR1-206, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

TSL 1 (best) BASIC

Gene CR1, Length 6,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-206ENST00000400960 HDAC5Q9UQL6 1122 aa10.58□□□□□ -0.72
CR1-206ENST00000400960 FYB1O15117 783 aa10.58□□□□□ -0.72
CR1-206ENST00000400960 AK7Q96M32 723 aa10.57□□□□□ -0.72
CR1-206ENST00000400960 SASS6Q6UVJ0 657 aa10.57□□□□□ -0.72
CR1-206ENST00000400960 PDILTQ8N807 584 aa10.57□□□□□ -0.72
CR1-206ENST00000400960 MYBBP1AQ9BQG0 1328 aaKnown RBP10.57□□□□□ -0.72
CR1-206ENST00000400960 R3HCC1Q9Y3T6 440 aaKnown RBP10.57□□□□□ -0.72
CR1-206ENST00000400960 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.57□□□□□ -0.72
CR1-206ENST00000400960 DHX37Q8IY37 1157 aaKnown RBP10.57□□□□□ -0.72
CR1-206ENST00000400960 L3MBTL2Q969R5 705 aa10.57□□□□□ -0.72
CR1-206ENST00000400960 ZKSCAN2Q63HK3 967 aa10.56□□□□□ -0.72
CR1-206ENST00000400960 NOL10Q9BSC4 688 aaKnown RBP10.56□□□□□ -0.72
CR1-206ENST00000400960 AMOTL1Q8IY63 956 aa10.56□□□□□ -0.72
CR1-206ENST00000400960 KIF3BO15066 747 aa10.56□□□□□ -0.72
CR1-206ENST00000400960 IFIT2P09913 472 aaKnown RBP10.56□□□□□ -0.72
CR1-206ENST00000400960 MAP7D2Q96T17 732 aa10.56□□□□□ -0.72
CR1-206ENST00000400960 MTMR7Q9Y216 660 aa10.56□□□□□ -0.72
CR1-206ENST00000400960 IPO7O95373 1038 aaKnown RBP10.55□□□□□ -0.72
CR1-206ENST00000400960 EVA1CP58658 441 aa10.55□□□□□ -0.72
CR1-206ENST00000400960 NLRP13Q86W25 1043 aa10.55□□□□□ -0.72
CR1-206ENST00000400960 C9orf78Q9NZ63 289 aaPredicted RBP10.55□□□□□ -0.72
CR1-206ENST00000400960 ANKRD20A12PQ8NF67 263 aa10.55□□□□□ -0.72
CR1-206ENST00000400960 CPLX1O14810 134 aa10.55□□□□□ -0.72
CR1-206ENST00000400960 MNS1Q8NEH6 495 aa10.55□□□□□ -0.72
CR1-206ENST00000400960 CCDC47Q96A33 483 aaKnown RBP10.55□□□□□ -0.72
CR1-206ENST00000400960 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.55□□□□□ -0.72
CR1-206ENST00000400960 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
CR1-206ENST00000400960 CAGE1Q8TC20 777 aa10.54□□□□□ -0.72
CR1-206ENST00000400960 PDE3BQ13370 1112 aa10.54□□□□□ -0.72
CR1-206ENST00000400960 HSP90AB2PQ58FF8 381 aa10.54□□□□□ -0.72
CR1-206ENST00000400960 VPS37DQ86XT2 251 aa10.54□□□□□ -0.72
CR1-206ENST00000400960 ANKRD30AQ9BXX3 1397 aa10.54□□□□□ -0.72
CR1-206ENST00000400960 HOOK1Q9UJC3 728 aaKnown RBP10.54□□□□□ -0.72
CR1-206ENST00000400960 CHMP4AQ9BY43 222 aa10.54□□□□□ -0.72
CR1-206ENST00000400960 FAM43AQ8N2R8 423 aa10.53□□□□□ -0.72
CR1-206ENST00000400960 PLCD4Q9BRC7 762 aa10.53□□□□□ -0.72
CR1-206ENST00000400960 SMC3Q9UQE7 1217 aa10.53□□□□□ -0.72
CR1-206ENST00000400960 NOM1Q5C9Z4 860 aaKnown RBP10.53□□□□□ -0.72
CR1-206ENST00000400960 RUFY2Q8WXA3 655 aa10.53□□□□□ -0.72
CR1-206ENST00000400960 CT47A1Q5JQC4 288 aaPredicted RBP10.53□□□□□ -0.72
CR1-206ENST00000400960 SYTL4Q96C24 671 aaPredicted RBP10.53□□□□□ -0.72
CR1-206ENST00000400960 EID1Q9Y6B2 187 aa10.53□□□□□ -0.72
CR1-206ENST00000400960 RBM10P98175 930 aaKnown RBP10.52□□□□□ -0.72
CR1-206ENST00000400960 E9PSI1 815 aa10.52□□□□□ -0.73
CR1-206ENST00000400960 ZFYVE27Q5T4F4 411 aa10.52□□□□□ -0.73
CR1-206ENST00000400960 ERICH2A1L162 156 aa10.52□□□□□ -0.73
CR1-206ENST00000400960 ZKSCAN1P17029 563 aaPredicted RBP10.52□□□□□ -0.73
CR1-206ENST00000400960 EPS15P42566 896 aa10.52□□□□□ -0.73
CR1-206ENST00000400960 COG3Q96JB2 828 aa10.52□□□□□ -0.73
CR1-206ENST00000400960 ODF2Q5BJF6 829 aa10.51□□□□□ -0.73
CR1-206ENST00000400960 PHLDB1Q86UU1 1377 aa10.51□□□□□ -0.73
CR1-206ENST00000400960 CCDC43Q96MW1 224 aaKnown RBP10.51□□□□□ -0.73
CR1-206ENST00000400960 VPS8Q8N3P4 1428 aa10.51□□□□□ -0.73
CR1-206ENST00000400960 TTC5Q8N0Z6 440 aa10.51□□□□□ -0.73
CR1-206ENST00000400960 RNF214Q8ND24 703 aa10.51□□□□□ -0.73
CR1-206ENST00000400960 ST20-MTHFSA0A0A6YYL1 179 aa10.51□□□□□ -0.73
CR1-206ENST00000400960 CWC22Q9HCG8 908 aaKnown RBP10.51□□□□□ -0.73
CR1-206ENST00000400960 CHMP5Q9NZZ3 219 aa10.51□□□□□ -0.73
CR1-206ENST00000400960 WASHC2CQ9Y4E1 1318 aa10.5□□□□□ -0.73
CR1-206ENST00000400960 REC8O95072 547 aa10.5□□□□□ -0.73
CR1-206ENST00000400960 ARGLU1Q9NWB6 273 aaPredicted RBP10.5□□□□□ -0.73
CR1-206ENST00000400960 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
CR1-206ENST00000400960 CGNL1Q0VF96 1302 aa10.5□□□□□ -0.73
CR1-206ENST00000400960 TRDNQ13061 729 aa10.5□□□□□ -0.73
CR1-206ENST00000400960 APAF1O14727 1248 aa10.5□□□□□ -0.73
CR1-206ENST00000400960 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.5□□□□□ -0.73
CR1-206ENST00000400960 CPLX2Q6PUV4 134 aaKnown RBP10.49□□□□□ -0.73
CR1-206ENST00000400960 OLFM4Q6UX06 510 aa10.49□□□□□ -0.73
CR1-206ENST00000400960 NEXNQ0ZGT2 675 aa10.49□□□□□ -0.73
CR1-206ENST00000400960 CCDC39Q9UFE4 941 aa10.49□□□□□ -0.73
CR1-206ENST00000400960 SMC2O95347 1197 aa10.49□□□□□ -0.73
CR1-206ENST00000400960 INTS3Q68E01 1043 aaKnown RBP10.49□□□□□ -0.73
CR1-206ENST00000400960 LNPKQ9C0E8 428 aa10.49□□□□□ -0.73
CR1-206ENST00000400960 MINK1Q8N4C8 1332 aaPredicted RBP10.49□□□□□ -0.73
CR1-206ENST00000400960 RIPK4P57078 832 aa10.49□□□□□ -0.73
CR1-206ENST00000400960 TEFQ10587 303 aa10.49□□□□□ -0.73
CR1-206ENST00000400960 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
CR1-206ENST00000400960 ACBD3Q9H3P7 528 aa10.48□□□□□ -0.73
CR1-206ENST00000400960 H0YHG0 523 aa10.48□□□□□ -0.73
CR1-206ENST00000400960 NASPP49321 788 aaPredicted RBP10.48□□□□□ -0.73
CR1-206ENST00000400960 G3BP1Q13283 466 aaKnown RBP eCLIP10.48□□□□□ -0.73
CR1-206ENST00000400960 SPC24Q8NBT2 197 aa10.48□□□□□ -0.73
CR1-206ENST00000400960 CHMP4CQ96CF2 233 aa10.48□□□□□ -0.73
CR1-206ENST00000400960 BRPF1P55201 1214 aaPredicted RBP10.48□□□□□ -0.73
CR1-206ENST00000400960 AIMP1Q12904 312 aaKnown RBP10.48□□□□□ -0.73
CR1-206ENST00000400960 CCDC73Q6ZRK6 1079 aa10.48□□□□□ -0.73
CR1-206ENST00000400960 LRRFIP1Q32MZ4 808 aaKnown RBP10.47□□□□□ -0.73
CR1-206ENST00000400960 HSP90B2PQ58FF3 399 aa10.47□□□□□ -0.73
CR1-206ENST00000400960 DZIP1LQ8IYY4 767 aaKnown RBP10.47□□□□□ -0.73
CR1-206ENST00000400960 ZNF428Q96B54 188 aa10.47□□□□□ -0.73
CR1-206ENST00000400960 DDX19BQ9UMR2 479 aa10.47□□□□□ -0.73
CR1-206ENST00000400960 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
CR1-206ENST00000400960 C22orf23Q9BZE7 217 aa10.47□□□□□ -0.73
CR1-206ENST00000400960 NEUROD6Q96NK8 337 aa10.47□□□□□ -0.73
CR1-206ENST00000400960 CDR1P51861 262 aa10.47□□□□□ -0.73
CR1-206ENST00000400960 NFKBIBQ15653 356 aa10.47□□□□□ -0.73
CR1-206ENST00000400960 WASHC4Q2M389 1173 aa10.47□□□□□ -0.73
CR1-206ENST00000400960 FKBP5Q13451 457 aaPredicted RBP10.47□□□□□ -0.73
CR1-206ENST00000400960 HMOX1P09601 288 aa10.46□□□□□ -0.73
CR1-206ENST00000400960 CEBPZQ03701 1054 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms