RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 ADGRB3O60242 1522 aa26.93■■□□□ 1.9
PDGFA-202ENST00000400761 KANK1Q14678 1352 aa26.93■■□□□ 1.9
PDGFA-202ENST00000400761 MEX3CQ5U5Q3 659 aaKnown RBP26.92■■□□□ 1.9
PDGFA-202ENST00000400761 CHD2O14647 1828 aaKnown RBP26.92■■□□□ 1.9
PDGFA-202ENST00000400761 LMTK2Q8IWU2 1503 aa26.91■■□□□ 1.9
PDGFA-202ENST00000400761 RRP7BPQ9NSQ0 103 aa26.91■■□□□ 1.9
PDGFA-202ENST00000400761 CROCC2H7BZ55 1655 aa26.9■■□□□ 1.9
PDGFA-202ENST00000400761 BCANQ96GW7 911 aa26.89■■□□□ 1.9
PDGFA-202ENST00000400761 NOS1P29475 1434 aa26.88■■□□□ 1.89
PDGFA-202ENST00000400761 SHPRHQ149N8 1683 aa26.88■■□□□ 1.89
PDGFA-202ENST00000400761 ABCC5O15440 1437 aa26.86■■□□□ 1.89
PDGFA-202ENST00000400761 AHDC1Q5TGY3 1603 aaPredicted RBP26.86■■□□□ 1.89
PDGFA-202ENST00000400761 RXRBP28702 533 aa26.85■■□□□ 1.89
PDGFA-202ENST00000400761 NCOA3Q9Y6Q9 1424 aa26.84■■□□□ 1.89
PDGFA-202ENST00000400761 SRCAPQ6ZRS2 3230 aa26.83■■□□□ 1.89
PDGFA-202ENST00000400761 CDK12Q9NYV4 1490 aaPredicted RBP26.83■■□□□ 1.89
PDGFA-202ENST00000400761 PLEKHG1Q9ULL1 1385 aa26.83■■□□□ 1.88
PDGFA-202ENST00000400761 SLC52A1Q9NWF4 448 aa26.82■■□□□ 1.88
PDGFA-202ENST00000400761 ZFYVE9O95405 1425 aa26.82■■□□□ 1.88
PDGFA-202ENST00000400761 MYO5BQ9ULV0 1848 aa26.79■■□□□ 1.88
PDGFA-202ENST00000400761 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.78■■□□□ 1.88
PDGFA-202ENST00000400761 DAPK1P53355 1430 aa26.76■■□□□ 1.87
PDGFA-202ENST00000400761 C14orf37Q86TY3 774 aa26.76■■□□□ 1.87
PDGFA-202ENST00000400761 CADPS2Q86UW7 1296 aa26.76■■□□□ 1.87
PDGFA-202ENST00000400761 DIP2AQ14689 1571 aa26.75■■□□□ 1.87
PDGFA-202ENST00000400761 TBX22Q9Y458 520 aa26.75■■□□□ 1.87
PDGFA-202ENST00000400761 RIMS2Q9UQ26 1411 aa26.74■■□□□ 1.87
PDGFA-202ENST00000400761 PPP1R15AO75807 674 aaPredicted RBP26.74■■□□□ 1.87
PDGFA-202ENST00000400761 C19orf44Q9H6X5 657 aa26.74■■□□□ 1.87
PDGFA-202ENST00000400761 PTPN23Q9H3S7 1636 aa26.74■■□□□ 1.87
PDGFA-202ENST00000400761 ATF3P18847 181 aa26.72■■□□□ 1.87
PDGFA-202ENST00000400761 HDGFP51858 240 aaKnown RBP26.72■■□□□ 1.87
PDGFA-202ENST00000400761 GCC2Q8IWJ2 1684 aa26.72■■□□□ 1.87
PDGFA-202ENST00000400761 NUTM2BA6NNL0 878 aaPredicted RBP26.71■■□□□ 1.87
PDGFA-202ENST00000400761 NUTM2EB1AL46 878 aaPredicted RBP26.71■■□□□ 1.87
PDGFA-202ENST00000400761 NUTM2AQ8IVF1 878 aaPredicted RBP26.71■■□□□ 1.87
PDGFA-202ENST00000400761 ANKRD30AQ9BXX3 1397 aa26.71■■□□□ 1.87
PDGFA-202ENST00000400761 AFF2P51816 1311 aa26.7■■□□□ 1.87
PDGFA-202ENST00000400761 RPRD2Q5VT52 1461 aaKnown RBP26.69■■□□□ 1.86
PDGFA-202ENST00000400761 TMEM131LA2VDJ0 1609 aa26.69■■□□□ 1.86
PDGFA-202ENST00000400761 BRINP3Q76B58 766 aa26.68■■□□□ 1.86
PDGFA-202ENST00000400761 ADAMTS13Q76LX8 1427 aa26.67■■□□□ 1.86
PDGFA-202ENST00000400761 CHIC2Q9UKJ5 165 aa26.66■■□□□ 1.86
PDGFA-202ENST00000400761 PIK3R4Q99570 1358 aa26.66■■□□□ 1.86
PDGFA-202ENST00000400761 RGS12O14924 1447 aa26.65■■□□□ 1.86
PDGFA-202ENST00000400761 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.64■■□□□ 1.86
PDGFA-202ENST00000400761 SETD5Q9C0A6 1442 aa26.63■■□□□ 1.85
PDGFA-202ENST00000400761 RBM6P78332 1123 aaKnown RBP26.61■■□□□ 1.85
PDGFA-202ENST00000400761 ASXL1Q8IXJ9 1541 aa26.6■■□□□ 1.85
PDGFA-202ENST00000400761 DCCP43146 1447 aa26.59■■□□□ 1.85
PDGFA-202ENST00000400761 NHSL1Q5SYE7 1610 aa26.59■■□□□ 1.85
PDGFA-202ENST00000400761 QTRT2Q9H974 415 aaKnown RBP26.59■■□□□ 1.85
PDGFA-202ENST00000400761 FAM50AQ14320 339 aaKnown RBP26.58■■□□□ 1.85
PDGFA-202ENST00000400761 RRBP1Q9P2E9 1410 aaKnown RBP26.57■■□□□ 1.84
PDGFA-202ENST00000400761 TRPM2O94759 1503 aa26.56■■□□□ 1.84
PDGFA-202ENST00000400761 NUTM2DQ5VT03 806 aaPredicted RBP26.56■■□□□ 1.84
PDGFA-202ENST00000400761 C8orf37Q96NL8 207 aa26.56■■□□□ 1.84
PDGFA-202ENST00000400761 AMOTL2Q9Y2J4 779 aa26.56■■□□□ 1.84
PDGFA-202ENST00000400761 PTPRUQ92729 1446 aa26.56■■□□□ 1.84
PDGFA-202ENST00000400761 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
PDGFA-202ENST00000400761 CHGAP10645 457 aaKnown RBP26.55■■□□□ 1.84
PDGFA-202ENST00000400761 LRRC59Q96AG4 307 aaKnown RBP26.55■■□□□ 1.84
PDGFA-202ENST00000400761 MST1RQ04912 1400 aa26.53■■□□□ 1.84
PDGFA-202ENST00000400761 PNPLA6Q8IY17 1366 aa26.51■■□□□ 1.83
PDGFA-202ENST00000400761 ANKRD50Q9ULJ7 1429 aa26.5■■□□□ 1.83
PDGFA-202ENST00000400761 ATAD2Q6PL18 1390 aa26.49■■□□□ 1.83
PDGFA-202ENST00000400761 UNC13BO14795 1591 aa26.49■■□□□ 1.83
PDGFA-202ENST00000400761 NGLY1Q96IV0 654 aa26.48■■□□□ 1.83
PDGFA-202ENST00000400761 XRN1Q8IZH2 1706 aaKnown RBP26.48■■□□□ 1.83
PDGFA-202ENST00000400761 E9PCH4 1651 aa26.45■■□□□ 1.82
PDGFA-202ENST00000400761 DDX17Q92841 729 aaKnown RBP26.45■■□□□ 1.82
PDGFA-202ENST00000400761 ZRANB1Q9UGI0 708 aa26.44■■□□□ 1.82
PDGFA-202ENST00000400761 FOXD1Q16676 465 aa26.43■■□□□ 1.82
PDGFA-202ENST00000400761 NRXN3Q9Y4C0 1643 aa26.42■■□□□ 1.82
PDGFA-202ENST00000400761 ADAMTS2O95450 1211 aa26.41■■□□□ 1.82
PDGFA-202ENST00000400761 SETBP1Q9Y6X0 1596 aa26.41■■□□□ 1.82
PDGFA-202ENST00000400761 EP400Q96L91 3159 aa26.4■■□□□ 1.82
PDGFA-202ENST00000400761 ITGAEP38570 1179 aa26.4■■□□□ 1.82
PDGFA-202ENST00000400761 ADGRL3Q9HAR2 1447 aa26.38■■□□□ 1.81
PDGFA-202ENST00000400761 USP21Q9UK80 565 aa26.36■■□□□ 1.81
PDGFA-202ENST00000400761 TRPC5Q9UL62 973 aaPredicted RBP26.36■■□□□ 1.81
PDGFA-202ENST00000400761 LAMC1P11047 1609 aa26.35■■□□□ 1.81
PDGFA-202ENST00000400761 NALCNQ8IZF0 1738 aa26.34■■□□□ 1.81
PDGFA-202ENST00000400761 METP08581 1390 aa26.33■■□□□ 1.81
PDGFA-202ENST00000400761 FNBP4Q8N3X1 1017 aaPredicted RBP26.32■■□□□ 1.8
PDGFA-202ENST00000400761 IQGAP3Q86VI3 1631 aa26.32■■□□□ 1.8
PDGFA-202ENST00000400761 ATRNO75882 1429 aa26.31■■□□□ 1.8
PDGFA-202ENST00000400761 PTCH1Q13635 1447 aa26.31■■□□□ 1.8
PDGFA-202ENST00000400761 C1orf167Q5SNV9 1468 aa26.3■■□□□ 1.8
PDGFA-202ENST00000400761 CCDC125Q86Z20 511 aa26.29■■□□□ 1.8
PDGFA-202ENST00000400761 SOS2Q07890 1332 aaPredicted RBP26.28■■□□□ 1.8
PDGFA-202ENST00000400761 COL22A1Q8NFW1 1626 aaPredicted RBP26.24■■□□□ 1.79
PDGFA-202ENST00000400761 ORAI2Q96SN7 254 aa26.22■■□□□ 1.79
PDGFA-202ENST00000400761 ROCK1Q13464 1354 aa26.21■■□□□ 1.79
PDGFA-202ENST00000400761 ZNF326Q5BKZ1 582 aaKnown RBP26.2■■□□□ 1.78
PDGFA-202ENST00000400761 NUP155O75694 1391 aa26.2■■□□□ 1.78
PDGFA-202ENST00000400761 BCL9LQ86UU0 1499 aa26.18■■□□□ 1.78
PDGFA-202ENST00000400761 SPHKAPQ2M3C7 1700 aa26.18■■□□□ 1.78
PDGFA-202ENST00000400761 MYOM2P54296 1465 aa26.17■■□□□ 1.78
PDGFA-202ENST00000400761 TRIM26Q12899 539 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms