RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
CSMD1-202ENST00000400186 CPLX1O14810 134 aa11.69□□□□□ -0.54
CSMD1-202ENST00000400186 ROCK1Q13464 1354 aa11.69□□□□□ -0.54
CSMD1-202ENST00000400186 EXOC6Q8TAG9 804 aa11.69□□□□□ -0.54
CSMD1-202ENST00000400186 CPLX2Q6PUV4 134 aaKnown RBP11.69□□□□□ -0.54
CSMD1-202ENST00000400186 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
CSMD1-202ENST00000400186 CCDC144AA2RUR9 1427 aa11.68□□□□□ -0.54
CSMD1-202ENST00000400186 HSP90B2PQ58FF3 399 aa11.68□□□□□ -0.54
CSMD1-202ENST00000400186 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
CSMD1-202ENST00000400186 NASPP49321 788 aaPredicted RBP11.68□□□□□ -0.54
CSMD1-202ENST00000400186 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
CSMD1-202ENST00000400186 MNS1Q8NEH6 495 aa11.68□□□□□ -0.54
CSMD1-202ENST00000400186 USP47Q96K76 1375 aa11.68□□□□□ -0.54
CSMD1-202ENST00000400186 UACAQ9BZF9 1416 aa11.67□□□□□ -0.54
CSMD1-202ENST00000400186 CDR1P51861 262 aa11.67□□□□□ -0.54
CSMD1-202ENST00000400186 CWC15Q9P013 229 aaKnown RBP11.67□□□□□ -0.54
CSMD1-202ENST00000400186 MTERF4Q7Z6M4 381 aaKnown RBP11.67□□□□□ -0.54
CSMD1-202ENST00000400186 CHMP5Q9NZZ3 219 aa11.66□□□□□ -0.54
CSMD1-202ENST00000400186 PANK3Q9H999 370 aa11.66□□□□□ -0.54
CSMD1-202ENST00000400186 NAP1L1P55209 391 aaKnown RBP11.66□□□□□ -0.54
CSMD1-202ENST00000400186 CCDC47Q96A33 483 aaKnown RBP11.66□□□□□ -0.54
CSMD1-202ENST00000400186 C9orf78Q9NZ63 289 aaPredicted RBP11.66□□□□□ -0.54
CSMD1-202ENST00000400186 DDX19BQ9UMR2 479 aa11.66□□□□□ -0.54
CSMD1-202ENST00000400186 COG6Q9Y2V7 657 aa11.66□□□□□ -0.54
CSMD1-202ENST00000400186 SMARCA2P51531 1590 aa11.66□□□□□ -0.54
CSMD1-202ENST00000400186 VPS37CA5D8V6 355 aaPredicted RBP11.66□□□□□ -0.54
CSMD1-202ENST00000400186 SASS6Q6UVJ0 657 aa11.66□□□□□ -0.54
CSMD1-202ENST00000400186 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
CSMD1-202ENST00000400186 CCDC39Q9UFE4 941 aa11.66□□□□□ -0.54
CSMD1-202ENST00000400186 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
CSMD1-202ENST00000400186 NUCB2P80303 420 aa11.65□□□□□ -0.54
CSMD1-202ENST00000400186 NAT10Q9H0A0 1025 aaKnown RBP11.65□□□□□ -0.54
CSMD1-202ENST00000400186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.65□□□□□ -0.54
CSMD1-202ENST00000400186 CCDC73Q6ZRK6 1079 aa11.65□□□□□ -0.54
CSMD1-202ENST00000400186 CCDC88BA6NC98 1476 aa11.65□□□□□ -0.55
CSMD1-202ENST00000400186 APPP05067 770 aa11.64□□□□□ -0.55
CSMD1-202ENST00000400186 AMOTL1Q8IY63 956 aa11.64□□□□□ -0.55
CSMD1-202ENST00000400186 NOL10Q9BSC4 688 aaKnown RBP11.64□□□□□ -0.55
CSMD1-202ENST00000400186 NEXNQ0ZGT2 675 aa11.64□□□□□ -0.55
CSMD1-202ENST00000400186 MAP7D2Q96T17 732 aa11.64□□□□□ -0.55
CSMD1-202ENST00000400186 IFIT2P09913 472 aaKnown RBP11.64□□□□□ -0.55
CSMD1-202ENST00000400186 C1orf141Q5JVX7 400 aa11.63□□□□□ -0.55
CSMD1-202ENST00000400186 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
CSMD1-202ENST00000400186 SMC3Q9UQE7 1217 aa11.63□□□□□ -0.55
CSMD1-202ENST00000400186 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
CSMD1-202ENST00000400186 EID1Q9Y6B2 187 aa11.63□□□□□ -0.55
CSMD1-202ENST00000400186 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
CSMD1-202ENST00000400186 NFXL1Q6ZNB6 911 aa11.63□□□□□ -0.55
CSMD1-202ENST00000400186 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
CSMD1-202ENST00000400186 DCTN1Q14203 1278 aa11.63□□□□□ -0.55
CSMD1-202ENST00000400186 TRDNQ13061 729 aa11.62□□□□□ -0.55
CSMD1-202ENST00000400186 CCDC191Q8NCU4 936 aa11.62□□□□□ -0.55
CSMD1-202ENST00000400186 FOSBP53539 338 aa11.62□□□□□ -0.55
CSMD1-202ENST00000400186 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
CSMD1-202ENST00000400186 CT47A1Q5JQC4 288 aaPredicted RBP11.62□□□□□ -0.55
CSMD1-202ENST00000400186 INTS3Q68E01 1043 aaKnown RBP11.62□□□□□ -0.55
CSMD1-202ENST00000400186 EFCAB2Q5VUJ9 269 aa11.62□□□□□ -0.55
CSMD1-202ENST00000400186 C22orf23Q9BZE7 217 aa11.62□□□□□ -0.55
CSMD1-202ENST00000400186 H0YHG0 523 aa11.61□□□□□ -0.55
CSMD1-202ENST00000400186 COG3Q96JB2 828 aa11.61□□□□□ -0.55
CSMD1-202ENST00000400186 DZIP1LQ8IYY4 767 aaKnown RBP11.61□□□□□ -0.55
CSMD1-202ENST00000400186 RAD21O60216 631 aa11.61□□□□□ -0.55
CSMD1-202ENST00000400186 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
CSMD1-202ENST00000400186 FHOD3Q2V2M9 1422 aa11.61□□□□□ -0.55
CSMD1-202ENST00000400186 EPS15P42566 896 aa11.61□□□□□ -0.55
CSMD1-202ENST00000400186 SAFBQ15424 915 aaKnown RBP eCLIP11.61□□□□□ -0.55
CSMD1-202ENST00000400186 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
CSMD1-202ENST00000400186 BCL11BQ9C0K0 894 aaPredicted RBP11.6□□□□□ -0.55
CSMD1-202ENST00000400186 OLFM4Q6UX06 510 aa11.6□□□□□ -0.55
CSMD1-202ENST00000400186 CCDC43Q96MW1 224 aaKnown RBP11.6□□□□□ -0.55
CSMD1-202ENST00000400186 PRKRIP1Q9H875 184 aaPredicted RBP11.6□□□□□ -0.55
CSMD1-202ENST00000400186 VPS37DQ86XT2 251 aa11.6□□□□□ -0.55
CSMD1-202ENST00000400186 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
CSMD1-202ENST00000400186 CCDC66A2RUB6 948 aa11.6□□□□□ -0.55
CSMD1-202ENST00000400186 KIF3BO15066 747 aa11.6□□□□□ -0.55
CSMD1-202ENST00000400186 DHX16O60231 1041 aaKnown RBP11.59□□□□□ -0.55
CSMD1-202ENST00000400186 R3HCC1Q9Y3T6 440 aaKnown RBP11.59□□□□□ -0.55
CSMD1-202ENST00000400186 MRE11P49959 708 aa11.59□□□□□ -0.55
CSMD1-202ENST00000400186 TRAK1Q9UPV9 953 aa11.59□□□□□ -0.55
CSMD1-202ENST00000400186 RDXP35241 583 aaKnown RBP11.59□□□□□ -0.55
CSMD1-202ENST00000400186 PDILTQ8N807 584 aa11.59□□□□□ -0.55
CSMD1-202ENST00000400186 CECR2Q9BXF3 1484 aa11.59□□□□□ -0.55
CSMD1-202ENST00000400186 ODF2Q5BJF6 829 aa11.59□□□□□ -0.55
CSMD1-202ENST00000400186 NINLQ9Y2I6 1382 aa11.58□□□□□ -0.55
CSMD1-202ENST00000400186 TTC5Q8N0Z6 440 aa11.58□□□□□ -0.56
CSMD1-202ENST00000400186 TEFQ10587 303 aa11.58□□□□□ -0.56
CSMD1-202ENST00000400186 NFKBIBQ15653 356 aa11.58□□□□□ -0.56
CSMD1-202ENST00000400186 MYO6Q9UM54 1294 aa11.58□□□□□ -0.56
CSMD1-202ENST00000400186 G3BP1Q13283 466 aaKnown RBP eCLIP11.58□□□□□ -0.56
CSMD1-202ENST00000400186 CCDC173Q0VFZ6 552 aa11.58□□□□□ -0.56
CSMD1-202ENST00000400186 CTDP1Q9Y5B0 961 aaPredicted RBP11.58□□□□□ -0.56
CSMD1-202ENST00000400186 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
CSMD1-202ENST00000400186 ERC2O15083 957 aa11.57□□□□□ -0.56
CSMD1-202ENST00000400186 ERICH2A1L162 156 aa11.57□□□□□ -0.56
CSMD1-202ENST00000400186 NUTM2FA1L443 756 aa11.57□□□□□ -0.56
CSMD1-202ENST00000400186 ERCC4Q92889 916 aaPredicted RBP11.57□□□□□ -0.56
CSMD1-202ENST00000400186 API5Q9BZZ5 524 aaKnown RBP11.57□□□□□ -0.56
CSMD1-202ENST00000400186 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.57□□□□□ -0.56
CSMD1-202ENST00000400186 EIF2S2P20042 333 aaKnown RBP11.56□□□□□ -0.56
CSMD1-202ENST00000400186 TRIM5Q9C035 493 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms