RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 CFAP65Q6ZU64 1925 aaKnown RBP12.01□□□□□ -0.49
LINC02449-202ENST00000399866 SCAF11Q99590 1463 aaKnown RBP12.01□□□□□ -0.49
LINC02449-202ENST00000399866 TMEM131LA2VDJ0 1609 aa12□□□□□ -0.49
LINC02449-202ENST00000399866 CHGAP10645 457 aaKnown RBP12□□□□□ -0.49
LINC02449-202ENST00000399866 RPGRIP1LQ68CZ1 1315 aa12□□□□□ -0.49
LINC02449-202ENST00000399866 SETBP1Q9Y6X0 1596 aa12□□□□□ -0.49
LINC02449-202ENST00000399866 YTHDC1Q96MU7 727 aaKnown RBP11.99□□□□□ -0.49
LINC02449-202ENST00000399866 ADGRF5Q8IZF2 1346 aa11.99□□□□□ -0.49
LINC02449-202ENST00000399866 PIK3C2GO75747 1445 aa11.99□□□□□ -0.49
LINC02449-202ENST00000399866 SLC52A1Q9NWF4 448 aa11.98□□□□□ -0.49
LINC02449-202ENST00000399866 CCER2I3L3R5 266 aa11.97□□□□□ -0.49
LINC02449-202ENST00000399866 MLECQ14165 292 aa11.97□□□□□ -0.49
LINC02449-202ENST00000399866 MYO5BQ9ULV0 1848 aa11.97□□□□□ -0.49
LINC02449-202ENST00000399866 MYO3AQ8NEV4 1616 aa11.97□□□□□ -0.49
LINC02449-202ENST00000399866 EIF3AQ14152 1382 aaKnown RBP11.96□□□□□ -0.49
LINC02449-202ENST00000399866 CENPBP07199 599 aaPredicted RBP11.96□□□□□ -0.49
LINC02449-202ENST00000399866 TRHP20396 242 aaPredicted RBP11.96□□□□□ -0.49
LINC02449-202ENST00000399866 IDI1Q13907 227 aa11.96□□□□□ -0.49
LINC02449-202ENST00000399866 DISP3Q9P2K9 1392 aa11.95□□□□□ -0.5
LINC02449-202ENST00000399866 FBXO31Q5XUX0 539 aaPredicted RBP11.95□□□□□ -0.5
LINC02449-202ENST00000399866 TESK2Q96S53 571 aa11.95□□□□□ -0.5
LINC02449-202ENST00000399866 ADGRB1O14514 1584 aa11.95□□□□□ -0.5
LINC02449-202ENST00000399866 ZFYVE9O95405 1425 aa11.94□□□□□ -0.5
LINC02449-202ENST00000399866 CFAP70Q5T0N1 1121 aa11.94□□□□□ -0.5
LINC02449-202ENST00000399866 POLR3GLQ9BT43 218 aa11.94□□□□□ -0.5
LINC02449-202ENST00000399866 A2ML1A8K2U0 1454 aa11.92□□□□□ -0.5
LINC02449-202ENST00000399866 ESF1Q9H501 851 aaKnown RBP11.92□□□□□ -0.5
LINC02449-202ENST00000399866 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
LINC02449-202ENST00000399866 TMF1P82094 1093 aa11.91□□□□□ -0.5
LINC02449-202ENST00000399866 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
LINC02449-202ENST00000399866 FER1L4A9Z1Z3 1794 aa11.9□□□□□ -0.5
LINC02449-202ENST00000399866 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
LINC02449-202ENST00000399866 KDM5AP29375 1690 aaKnown RBP11.9□□□□□ -0.5
LINC02449-202ENST00000399866 ASXL1Q8IXJ9 1541 aa11.9□□□□□ -0.5
LINC02449-202ENST00000399866 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
LINC02449-202ENST00000399866 QRICH2Q9H0J4 1663 aa11.89□□□□□ -0.51
LINC02449-202ENST00000399866 TNRQ92752 1358 aa11.89□□□□□ -0.51
LINC02449-202ENST00000399866 MYOM1P52179 1685 aa11.88□□□□□ -0.51
LINC02449-202ENST00000399866 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
LINC02449-202ENST00000399866 C3P01024 1663 aa11.87□□□□□ -0.51
LINC02449-202ENST00000399866 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
LINC02449-202ENST00000399866 NUTM2DQ5VT03 806 aaPredicted RBP11.87□□□□□ -0.51
LINC02449-202ENST00000399866 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
LINC02449-202ENST00000399866 UBR1Q8IWV7 1749 aa11.86□□□□□ -0.51
LINC02449-202ENST00000399866 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
LINC02449-202ENST00000399866 ALKQ9UM73 1620 aa11.86□□□□□ -0.51
LINC02449-202ENST00000399866 CDCA8Q53HL2 280 aa11.85□□□□□ -0.51
LINC02449-202ENST00000399866 CENPJQ9HC77 1338 aaPredicted RBP11.85□□□□□ -0.51
LINC02449-202ENST00000399866 NLRP1Q9C000 1473 aa11.84□□□□□ -0.51
LINC02449-202ENST00000399866 SETD1AO15047 1707 aaKnown RBP11.84□□□□□ -0.51
LINC02449-202ENST00000399866 KTN1Q86UP2 1357 aaKnown RBP11.83□□□□□ -0.52
LINC02449-202ENST00000399866 NRXN3Q9Y4C0 1643 aa11.83□□□□□ -0.52
LINC02449-202ENST00000399866 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
LINC02449-202ENST00000399866 TMEM132EQ6IEE7 984 aa11.83□□□□□ -0.52
LINC02449-202ENST00000399866 TRAK1Q9UPV9 953 aa11.82□□□□□ -0.52
LINC02449-202ENST00000399866 PTPRMP28827 1452 aa11.82□□□□□ -0.52
LINC02449-202ENST00000399866 YTHDC2Q9H6S0 1430 aaKnown RBP11.81□□□□□ -0.52
LINC02449-202ENST00000399866 TULP4Q9NRJ4 1543 aa11.81□□□□□ -0.52
LINC02449-202ENST00000399866 CCDC184Q52MB2 194 aa11.8□□□□□ -0.52
LINC02449-202ENST00000399866 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC02449-202ENST00000399866 PANK3Q9H999 370 aa11.8□□□□□ -0.52
LINC02449-202ENST00000399866 RIMS1Q86UR5 1692 aaKnown RBP11.8□□□□□ -0.52
LINC02449-202ENST00000399866 PARD3Q8TEW0 1356 aa11.79□□□□□ -0.52
LINC02449-202ENST00000399866 PER1O15534 1290 aaPredicted RBP11.79□□□□□ -0.52
LINC02449-202ENST00000399866 MRS2Q9HD23 443 aa11.79□□□□□ -0.52
LINC02449-202ENST00000399866 DLC1Q96QB1 1528 aa11.79□□□□□ -0.52
LINC02449-202ENST00000399866 TMEM2Q9UHN6 1383 aa11.79□□□□□ -0.52
LINC02449-202ENST00000399866 ADAMTSL3P82987 1691 aa11.78□□□□□ -0.52
LINC02449-202ENST00000399866 RALBP1Q15311 655 aa11.78□□□□□ -0.52
LINC02449-202ENST00000399866 KNDC1Q76NI1 1749 aa11.77□□□□□ -0.52
LINC02449-202ENST00000399866 CEBPAP49715 358 aaPredicted RBP11.77□□□□□ -0.53
LINC02449-202ENST00000399866 CNGB1Q14028 1251 aaPredicted RBP11.77□□□□□ -0.53
LINC02449-202ENST00000399866 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.53
LINC02449-202ENST00000399866 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.53
LINC02449-202ENST00000399866 LRPPRCP42704 1394 aaKnown RBP11.77□□□□□ -0.53
LINC02449-202ENST00000399866 SLIT1O75093 1534 aa11.76□□□□□ -0.53
LINC02449-202ENST00000399866 BRD4O60885 1362 aaPredicted RBP11.76□□□□□ -0.53
LINC02449-202ENST00000399866 ARHGAP23Q9P227 1491 aa11.76□□□□□ -0.53
LINC02449-202ENST00000399866 STK26Q9P289 416 aa11.75□□□□□ -0.53
LINC02449-202ENST00000399866 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
LINC02449-202ENST00000399866 EVC2Q86UK5 1308 aa11.74□□□□□ -0.53
LINC02449-202ENST00000399866 SCAF1Q9H7N4 1312 aaKnown RBP11.74□□□□□ -0.53
LINC02449-202ENST00000399866 PLEKHG1Q9ULL1 1385 aa11.74□□□□□ -0.53
LINC02449-202ENST00000399866 CPS1P31327 1500 aa11.74□□□□□ -0.53
LINC02449-202ENST00000399866 CEP170BQ9Y4F5 1589 aaPredicted RBP11.74□□□□□ -0.53
LINC02449-202ENST00000399866 USP32Q8NFA0 1604 aa11.74□□□□□ -0.53
LINC02449-202ENST00000399866 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
LINC02449-202ENST00000399866 PUS7Q96PZ0 661 aaKnown RBP11.73□□□□□ -0.53
LINC02449-202ENST00000399866 NPC1L1Q9UHC9 1359 aa11.73□□□□□ -0.53
LINC02449-202ENST00000399866 TECPR2O15040 1411 aa11.72□□□□□ -0.53
LINC02449-202ENST00000399866 ADAMTS13Q76LX8 1427 aa11.72□□□□□ -0.53
LINC02449-202ENST00000399866 METP08581 1390 aa11.72□□□□□ -0.53
LINC02449-202ENST00000399866 CC2D1BQ5T0F9 858 aaKnown RBP11.72□□□□□ -0.53
LINC02449-202ENST00000399866 PRAM1Q96QH2 718 aa11.72□□□□□ -0.53
LINC02449-202ENST00000399866 KNSTRNQ9Y448 316 aa11.72□□□□□ -0.53
LINC02449-202ENST00000399866 ABCC11Q96J66 1382 aa11.71□□□□□ -0.53
LINC02449-202ENST00000399866 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
LINC02449-202ENST00000399866 PLPPR3Q6T4P5 718 aa11.71□□□□□ -0.53
LINC02449-202ENST00000399866 FAM9BQ8IZU0 186 aa11.71□□□□□ -0.53
LINC02449-202ENST00000399866 POGKQ9P215 609 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms