RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ACBD3Q9H3P7 528 aa15□□□□□ -0.01
CACNA1C-219ENST00000399649 NLRP13Q86W25 1043 aa15□□□□□ -0.01
CACNA1C-219ENST00000399649 KIF15Q9NS87 1388 aa15□□□□□ -0.01
CACNA1C-219ENST00000399649 TRDNQ13061 729 aa15□□□□□ -0.01
CACNA1C-219ENST00000399649 BICD2Q8TD16 824 aa15□□□□□ -0.01
CACNA1C-219ENST00000399649 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.99□□□□□ -0.01
CACNA1C-219ENST00000399649 RRP7AQ9Y3A4 280 aaKnown RBP14.99□□□□□ -0.01
CACNA1C-219ENST00000399649 IFIT2P09913 472 aaKnown RBP14.99□□□□□ -0.01
CACNA1C-219ENST00000399649 NOM1Q5C9Z4 860 aaKnown RBP14.99□□□□□ -0.01
CACNA1C-219ENST00000399649 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
CACNA1C-219ENST00000399649 SOGA1O94964 1423 aa14.99□□□□□ -0.01
CACNA1C-219ENST00000399649 C9orf78Q9NZ63 289 aaPredicted RBP14.99□□□□□ -0.01
CACNA1C-219ENST00000399649 KIF3BO15066 747 aa14.98□□□□□ -0.01
CACNA1C-219ENST00000399649 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
CACNA1C-219ENST00000399649 ZKSCAN2Q63HK3 967 aa14.98□□□□□ -0.01
CACNA1C-219ENST00000399649 COG3Q96JB2 828 aa14.98□□□□□ -0.01
CACNA1C-219ENST00000399649 REC8O95072 547 aa14.97□□□□□ -0.01
CACNA1C-219ENST00000399649 RNF20Q5VTR2 975 aa14.97□□□□□ -0.01
CACNA1C-219ENST00000399649 SASS6Q6UVJ0 657 aa14.97□□□□□ -0.01
CACNA1C-219ENST00000399649 TEFQ10587 303 aa14.97□□□□□ -0.01
CACNA1C-219ENST00000399649 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
CACNA1C-219ENST00000399649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.96□□□□□ -0.01
CACNA1C-219ENST00000399649 EPS15P42566 896 aa14.96□□□□□ -0.01
CACNA1C-219ENST00000399649 HSP90AB2PQ58FF8 381 aa14.96□□□□□ -0.01
CACNA1C-219ENST00000399649 ARGLU1Q9NWB6 273 aaPredicted RBP14.96□□□□□ -0.01
CACNA1C-219ENST00000399649 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.02
CACNA1C-219ENST00000399649 GSE1Q14687 1217 aa14.96□□□□□ -0.02
CACNA1C-219ENST00000399649 MYBBP1AQ9BQG0 1328 aaKnown RBP14.95□□□□□ -0.02
CACNA1C-219ENST00000399649 MEX3CQ5U5Q3 659 aaKnown RBP14.95□□□□□ -0.02
CACNA1C-219ENST00000399649 EIF2S2P20042 333 aaKnown RBP14.95□□□□□ -0.02
CACNA1C-219ENST00000399649 ELL2O00472 640 aaPredicted RBP14.95□□□□□ -0.02
CACNA1C-219ENST00000399649 R3HCC1Q9Y3T6 440 aaKnown RBP14.95□□□□□ -0.02
CACNA1C-219ENST00000399649 ROCK1Q13464 1354 aa14.94□□□□□ -0.02
CACNA1C-219ENST00000399649 SAFBQ15424 915 aaKnown RBP eCLIP14.94□□□□□ -0.02
CACNA1C-219ENST00000399649 MNS1Q8NEH6 495 aa14.94□□□□□ -0.02
CACNA1C-219ENST00000399649 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
CACNA1C-219ENST00000399649 RAB3GAP2Q9H2M9 1393 aa14.94□□□□□ -0.02
CACNA1C-219ENST00000399649 E9PSI1 815 aa14.94□□□□□ -0.02
CACNA1C-219ENST00000399649 DDX58O95786 925 aaKnown RBP14.93□□□□□ -0.02
CACNA1C-219ENST00000399649 CCDC173Q0VFZ6 552 aa14.93□□□□□ -0.02
CACNA1C-219ENST00000399649 VSIG10Q8N0Z9 540 aa14.93□□□□□ -0.02
CACNA1C-219ENST00000399649 TRAK1Q9UPV9 953 aa14.93□□□□□ -0.02
CACNA1C-219ENST00000399649 RDXP35241 583 aaKnown RBP14.93□□□□□ -0.02
CACNA1C-219ENST00000399649 FMN1Q68DA7 1419 aa14.93□□□□□ -0.02
CACNA1C-219ENST00000399649 MAP7D2Q96T17 732 aa14.93□□□□□ -0.02
CACNA1C-219ENST00000399649 ZFYVE27Q5T4F4 411 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 MYO6Q9UM54 1294 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 UACAQ9BZF9 1416 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 DCTN1Q14203 1278 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 BCL2L13Q9BXK5 485 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 BRMS1Q9HCU9 246 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 G3BP1Q13283 466 aaKnown RBP eCLIP14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 FOSBP53539 338 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 OLFM4Q6UX06 510 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 SMC3Q9UQE7 1217 aa14.92□□□□□ -0.02
CACNA1C-219ENST00000399649 CGNL1Q0VF96 1302 aa14.91□□□□□ -0.02
CACNA1C-219ENST00000399649 SLC4A3P48751 1232 aa14.91□□□□□ -0.02
CACNA1C-219ENST00000399649 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
CACNA1C-219ENST00000399649 PDE4AP27815 886 aa14.91□□□□□ -0.02
CACNA1C-219ENST00000399649 HSP90B2PQ58FF3 399 aa14.91□□□□□ -0.02
CACNA1C-219ENST00000399649 CAGE1Q8TC20 777 aa14.91□□□□□ -0.02
CACNA1C-219ENST00000399649 RBM33Q96EV2 1170 aaKnown RBP14.91□□□□□ -0.02
CACNA1C-219ENST00000399649 CCDC73Q6ZRK6 1079 aa14.9□□□□□ -0.02
CACNA1C-219ENST00000399649 VPS37CA5D8V6 355 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-219ENST00000399649 HNRNPMP52272 730 aaKnown RBP eCLIP14.9□□□□□ -0.02
CACNA1C-219ENST00000399649 IFT57Q9NWB7 429 aa14.9□□□□□ -0.02
CACNA1C-219ENST00000399649 CCDC191Q8NCU4 936 aa14.9□□□□□ -0.02
CACNA1C-219ENST00000399649 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
CACNA1C-219ENST00000399649 CRBNQ96SW2 442 aa14.89□□□□□ -0.03
CACNA1C-219ENST00000399649 FAM13BQ9NYF5 915 aa14.89□□□□□ -0.03
CACNA1C-219ENST00000399649 DDX19BQ9UMR2 479 aa14.89□□□□□ -0.03
CACNA1C-219ENST00000399649 SYTL4Q96C24 671 aaPredicted RBP14.89□□□□□ -0.03
CACNA1C-219ENST00000399649 EVC2Q86UK5 1308 aa14.88□□□□□ -0.03
CACNA1C-219ENST00000399649 NAT10Q9H0A0 1025 aaKnown RBP14.88□□□□□ -0.03
CACNA1C-219ENST00000399649 OFD1O75665 1012 aa14.88□□□□□ -0.03
CACNA1C-219ENST00000399649 INTS3Q68E01 1043 aaKnown RBP14.88□□□□□ -0.03
CACNA1C-219ENST00000399649 NECTIN2Q92692 538 aa14.88□□□□□ -0.03
CACNA1C-219ENST00000399649 PANK3Q9H999 370 aa14.88□□□□□ -0.03
CACNA1C-219ENST00000399649 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
CACNA1C-219ENST00000399649 WWC2Q6AWC2 1192 aa14.88□□□□□ -0.03
CACNA1C-219ENST00000399649 ERCC4Q92889 916 aaPredicted RBP14.88□□□□□ -0.03
CACNA1C-219ENST00000399649 PDILTQ8N807 584 aa14.87□□□□□ -0.03
CACNA1C-219ENST00000399649 RRP1P56182 461 aaKnown RBP14.87□□□□□ -0.03
CACNA1C-219ENST00000399649 XBP1P17861 261 aa14.87□□□□□ -0.03
CACNA1C-219ENST00000399649 ERC2O15083 957 aa14.87□□□□□ -0.03
CACNA1C-219ENST00000399649 PLIN1O60240 522 aa14.86□□□□□ -0.03
CACNA1C-219ENST00000399649 FYB1O15117 783 aa14.86□□□□□ -0.03
CACNA1C-219ENST00000399649 TMEM132AQ24JP5 1023 aa14.86□□□□□ -0.03
CACNA1C-219ENST00000399649 API5Q9BZZ5 524 aaKnown RBP14.86□□□□□ -0.03
CACNA1C-219ENST00000399649 CHMP5Q9NZZ3 219 aa14.86□□□□□ -0.03
CACNA1C-219ENST00000399649 COG6Q9Y2V7 657 aa14.86□□□□□ -0.03
CACNA1C-219ENST00000399649 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
CACNA1C-219ENST00000399649 RALYLQ86SE5 291 aaKnown RBP14.85□□□□□ -0.03
CACNA1C-219ENST00000399649 NUCB2P80303 420 aa14.85□□□□□ -0.03
CACNA1C-219ENST00000399649 HSP90AB4PQ58FF6 505 aa14.85□□□□□ -0.03
CACNA1C-219ENST00000399649 CWC15Q9P013 229 aaKnown RBP14.85□□□□□ -0.03
CACNA1C-219ENST00000399649 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
CACNA1C-219ENST00000399649 L3MBTL2Q969R5 705 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms