RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 TPM1P09493 284 aa13.56□□□□□ -0.24
CACNA1C-215ENST00000399637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-215ENST00000399637 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-215ENST00000399637 NEXNQ0ZGT2 675 aa13.56□□□□□ -0.24
CACNA1C-215ENST00000399637 FAM184AQ8NB25 1140 aa13.56□□□□□ -0.24
CACNA1C-215ENST00000399637 COG3Q96JB2 828 aa13.56□□□□□ -0.24
CACNA1C-215ENST00000399637 TRAK1Q9UPV9 953 aa13.56□□□□□ -0.24
CACNA1C-215ENST00000399637 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
CACNA1C-215ENST00000399637 FOXD4L5Q5VV16 416 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-215ENST00000399637 FOXD4L4Q8WXT5 416 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-215ENST00000399637 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
CACNA1C-215ENST00000399637 CENPJQ9HC77 1338 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-215ENST00000399637 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
CACNA1C-215ENST00000399637 NLRP2Q9NX02 1062 aa13.54□□□□□ -0.24
CACNA1C-215ENST00000399637 CUX2O14529 1486 aa13.53□□□□□ -0.24
CACNA1C-215ENST00000399637 RBM5P52756 815 aaKnown RBP eCLIP13.53□□□□□ -0.24
CACNA1C-215ENST00000399637 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
CACNA1C-215ENST00000399637 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
CACNA1C-215ENST00000399637 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-215ENST00000399637 PLIN1O60240 522 aa13.53□□□□□ -0.24
CACNA1C-215ENST00000399637 GOLGA6L19H0YKK7 550 aa13.52□□□□□ -0.24
CACNA1C-215ENST00000399637 WDHD1O75717 1129 aaPredicted RBP13.52□□□□□ -0.24
CACNA1C-215ENST00000399637 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.25
CACNA1C-215ENST00000399637 GRM1Q13255 1194 aa13.52□□□□□ -0.25
CACNA1C-215ENST00000399637 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-215ENST00000399637 TMEM87AQ8NBN3 555 aa13.52□□□□□ -0.25
CACNA1C-215ENST00000399637 RILPL2Q969X0 211 aa13.51□□□□□ -0.25
CACNA1C-215ENST00000399637 CCDC47Q96A33 483 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-215ENST00000399637 PCMTD1Q96MG8 357 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-215ENST00000399637 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-215ENST00000399637 NUP155O75694 1391 aa13.51□□□□□ -0.25
CACNA1C-215ENST00000399637 DDX11L8A8MPP1 907 aa13.51□□□□□ -0.25
CACNA1C-215ENST00000399637 LRRFIP1Q32MZ4 808 aaKnown RBP13.51□□□□□ -0.25
CACNA1C-215ENST00000399637 SKIDA1Q1XH10 827 aa13.51□□□□□ -0.25
CACNA1C-215ENST00000399637 TTLL12Q14166 644 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-215ENST00000399637 TRIM29Q14134 588 aa13.5□□□□□ -0.25
CACNA1C-215ENST00000399637 GPS2Q13227 327 aa13.5□□□□□ -0.25
CACNA1C-215ENST00000399637 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
CACNA1C-215ENST00000399637 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
CACNA1C-215ENST00000399637 C9orf78Q9NZ63 289 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-215ENST00000399637 CLUAP1Q96AJ1 413 aa13.49□□□□□ -0.25
CACNA1C-215ENST00000399637 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
CACNA1C-215ENST00000399637 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-215ENST00000399637 ATP6V1DQ9Y5K8 247 aa13.48□□□□□ -0.25
CACNA1C-215ENST00000399637 ODF2Q5BJF6 829 aa13.48□□□□□ -0.25
CACNA1C-215ENST00000399637 IPO9Q96P70 1041 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-215ENST00000399637 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
CACNA1C-215ENST00000399637 BECN2A8MW95 431 aa13.47□□□□□ -0.25
CACNA1C-215ENST00000399637 CHMP4BP1P59074 171 aa13.47□□□□□ -0.25
CACNA1C-215ENST00000399637 ERICH2A1L162 156 aa13.47□□□□□ -0.25
CACNA1C-215ENST00000399637 MCTP1Q6DN14 999 aa13.47□□□□□ -0.25
CACNA1C-215ENST00000399637 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
CACNA1C-215ENST00000399637 KIF21BO75037 1637 aa13.47□□□□□ -0.25
CACNA1C-215ENST00000399637 ATP2B2Q01814 1243 aa13.46□□□□□ -0.25
CACNA1C-215ENST00000399637 ESCO1Q5FWF5 840 aa13.46□□□□□ -0.26
CACNA1C-215ENST00000399637 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.26
CACNA1C-215ENST00000399637 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-215ENST00000399637 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
CACNA1C-215ENST00000399637 ZFYVE27Q5T4F4 411 aa13.45□□□□□ -0.26
CACNA1C-215ENST00000399637 CT47A1Q5JQC4 288 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-215ENST00000399637 HOOK1Q9UJC3 728 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-215ENST00000399637 CPLX2Q6PUV4 134 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-215ENST00000399637 DIAPH3Q9NSV4 1193 aa13.44□□□□□ -0.26
CACNA1C-215ENST00000399637 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
CACNA1C-215ENST00000399637 DDX58O95786 925 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-215ENST00000399637 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
CACNA1C-215ENST00000399637 WIZO95785 1651 aa13.44□□□□□ -0.26
CACNA1C-215ENST00000399637 IPO7O95373 1038 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-215ENST00000399637 RUFY2Q8WXA3 655 aa13.43□□□□□ -0.26
CACNA1C-215ENST00000399637 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-215ENST00000399637 AIMP1Q12904 312 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-215ENST00000399637 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-215ENST00000399637 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
CACNA1C-215ENST00000399637 ANO2Q9NQ90 1003 aa13.42□□□□□ -0.26
CACNA1C-215ENST00000399637 SKOR2Q2VWA4 1001 aaPredicted RBP13.42□□□□□ -0.26
CACNA1C-215ENST00000399637 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
CACNA1C-215ENST00000399637 TRDNQ13061 729 aa13.4□□□□□ -0.26
CACNA1C-215ENST00000399637 RIC3Q7Z5B4 369 aa13.4□□□□□ -0.26
CACNA1C-215ENST00000399637 CCDC97Q96F63 343 aaPredicted RBP13.4□□□□□ -0.26
CACNA1C-215ENST00000399637 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
CACNA1C-215ENST00000399637 ZNF592Q92610 1267 aa13.4□□□□□ -0.26
CACNA1C-215ENST00000399637 UACAQ9BZF9 1416 aa13.4□□□□□ -0.26
CACNA1C-215ENST00000399637 FOXD4L6Q3SYB3 417 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 FOXD4L3Q6VB84 417 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 DDX54Q8TDD1 881 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 DDX49Q9Y6V7 483 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 RRP7AQ9Y3A4 280 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 CPLX1O14810 134 aa13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 IFIT2P09913 472 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-215ENST00000399637 NLRP13Q86W25 1043 aa13.38□□□□□ -0.27
CACNA1C-215ENST00000399637 CA8P35219 290 aa13.38□□□□□ -0.27
CACNA1C-215ENST00000399637 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-215ENST00000399637 ZBED9Q6R2W3 1325 aa13.38□□□□□ -0.27
CACNA1C-215ENST00000399637 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
CACNA1C-215ENST00000399637 ZKSCAN1P17029 563 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms