RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 RALBP1Q15311 655 aa17.18■□□□□ 0.34
CACNA1C-211ENST00000399617 STK11IPQ8N1F8 1099 aa17.18■□□□□ 0.34
CACNA1C-211ENST00000399617 ANKRD45Q5TZF3 282 aa17.18■□□□□ 0.34
CACNA1C-211ENST00000399617 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
CACNA1C-211ENST00000399617 AMOTL1Q8IY63 956 aa17.16■□□□□ 0.34
CACNA1C-211ENST00000399617 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
CACNA1C-211ENST00000399617 RIC3Q7Z5B4 369 aa17.16■□□□□ 0.34
CACNA1C-211ENST00000399617 NOP58Q9Y2X3 529 aaKnown RBP17.15■□□□□ 0.34
CACNA1C-211ENST00000399617 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
CACNA1C-211ENST00000399617 SLC26A8Q96RN1 970 aa17.15■□□□□ 0.34
CACNA1C-211ENST00000399617 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
CACNA1C-211ENST00000399617 AKAP17AQ02040 695 aaKnown RBP17.14■□□□□ 0.33
CACNA1C-211ENST00000399617 RSPH4AQ5TD94 716 aa17.14■□□□□ 0.33
CACNA1C-211ENST00000399617 BICDL1Q6ZP65 573 aa17.14■□□□□ 0.33
CACNA1C-211ENST00000399617 RIPK4P57078 832 aa17.14■□□□□ 0.33
CACNA1C-211ENST00000399617 FKBP5Q13451 457 aaPredicted RBP17.14■□□□□ 0.33
CACNA1C-211ENST00000399617 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
CACNA1C-211ENST00000399617 MCTP1Q6DN14 999 aa17.14■□□□□ 0.33
CACNA1C-211ENST00000399617 IBSPP21815 317 aaPredicted RBP17.13■□□□□ 0.33
CACNA1C-211ENST00000399617 SF3A1Q15459 793 aaKnown RBP17.13■□□□□ 0.33
CACNA1C-211ENST00000399617 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
CACNA1C-211ENST00000399617 TOM1L2Q6ZVM7 507 aa17.13■□□□□ 0.33
CACNA1C-211ENST00000399617 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNA1C-211ENST00000399617 CHAF1AQ13111 956 aaPredicted RBP17.12■□□□□ 0.33
CACNA1C-211ENST00000399617 ADAMTS2O95450 1211 aa17.12■□□□□ 0.33
CACNA1C-211ENST00000399617 RAPGEF3O95398 923 aa17.12■□□□□ 0.33
CACNA1C-211ENST00000399617 IKQ13123 557 aaPredicted RBP17.12■□□□□ 0.33
CACNA1C-211ENST00000399617 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
CACNA1C-211ENST00000399617 H3BQV1 296 aa17.11■□□□□ 0.33
CACNA1C-211ENST00000399617 IFFO2Q5TF58 517 aa17.11■□□□□ 0.33
CACNA1C-211ENST00000399617 CHMP4AQ9BY43 222 aa17.1■□□□□ 0.33
CACNA1C-211ENST00000399617 CCAR1Q8IX12 1150 aaKnown RBP17.1■□□□□ 0.33
CACNA1C-211ENST00000399617 APAF1O14727 1248 aa17.09■□□□□ 0.33
CACNA1C-211ENST00000399617 HDAC5Q9UQL6 1122 aa17.09■□□□□ 0.33
CACNA1C-211ENST00000399617 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.33
CACNA1C-211ENST00000399617 NFXL1Q6ZNB6 911 aa17.08■□□□□ 0.33
CACNA1C-211ENST00000399617 ATAD2BQ9ULI0 1458 aa17.08■□□□□ 0.32
CACNA1C-211ENST00000399617 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.32
CACNA1C-211ENST00000399617 FAM184AQ8NB25 1140 aa17.07■□□□□ 0.32
CACNA1C-211ENST00000399617 KIF16BQ96L93 1317 aa17.07■□□□□ 0.32
CACNA1C-211ENST00000399617 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
CACNA1C-211ENST00000399617 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
CACNA1C-211ENST00000399617 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
CACNA1C-211ENST00000399617 RBM5P52756 815 aaKnown RBP eCLIP17.06■□□□□ 0.32
CACNA1C-211ENST00000399617 PAXIP1Q6ZW49 1069 aaPredicted RBP17.06■□□□□ 0.32
CACNA1C-211ENST00000399617 WASHC4Q2M389 1173 aa17.05■□□□□ 0.32
CACNA1C-211ENST00000399617 ATP2B2Q01814 1243 aa17.05■□□□□ 0.32
CACNA1C-211ENST00000399617 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
CACNA1C-211ENST00000399617 ANO2Q9NQ90 1003 aa17.05■□□□□ 0.32
CACNA1C-211ENST00000399617 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
CACNA1C-211ENST00000399617 A0A0U1RQG5 324 aaPredicted RBP17.05■□□□□ 0.32
CACNA1C-211ENST00000399617 DDX58O95786 925 aaKnown RBP17.04■□□□□ 0.32
CACNA1C-211ENST00000399617 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
CACNA1C-211ENST00000399617 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
CACNA1C-211ENST00000399617 CEP89Q96ST8 783 aa17.04■□□□□ 0.32
CACNA1C-211ENST00000399617 GPRASP1Q5JY77 1395 aa17.04■□□□□ 0.32
CACNA1C-211ENST00000399617 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
CACNA1C-211ENST00000399617 MSNP26038 577 aaKnown RBP17.03■□□□□ 0.32
CACNA1C-211ENST00000399617 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
CACNA1C-211ENST00000399617 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
CACNA1C-211ENST00000399617 PRAM1Q96QH2 718 aa17.03■□□□□ 0.32
CACNA1C-211ENST00000399617 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.32
CACNA1C-211ENST00000399617 HTATSF1O43719 755 aaKnown RBP17.02■□□□□ 0.32
CACNA1C-211ENST00000399617 CCDC43Q96MW1 224 aaKnown RBP17.02■□□□□ 0.32
CACNA1C-211ENST00000399617 NLRP13Q86W25 1043 aa17.02■□□□□ 0.31
CACNA1C-211ENST00000399617 MYL6BP14649 208 aa17.01■□□□□ 0.31
CACNA1C-211ENST00000399617 ARHGAP5Q13017 1502 aa17.01■□□□□ 0.31
CACNA1C-211ENST00000399617 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
CACNA1C-211ENST00000399617 TPM4P67936 248 aa17■□□□□ 0.31
CACNA1C-211ENST00000399617 KIF6Q6ZMV9 814 aa17■□□□□ 0.31
CACNA1C-211ENST00000399617 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
CACNA1C-211ENST00000399617 DHX57Q6P158 1386 aaKnown RBP17■□□□□ 0.31
CACNA1C-211ENST00000399617 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
CACNA1C-211ENST00000399617 CFAP70Q5T0N1 1121 aa16.99■□□□□ 0.31
CACNA1C-211ENST00000399617 PCMTD1Q96MG8 357 aaPredicted RBP16.99■□□□□ 0.31
CACNA1C-211ENST00000399617 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
CACNA1C-211ENST00000399617 CABP4P57796 275 aa16.98■□□□□ 0.31
CACNA1C-211ENST00000399617 DNAJC2Q99543 621 aaKnown RBP16.98■□□□□ 0.31
CACNA1C-211ENST00000399617 TMEM132AQ24JP5 1023 aa16.98■□□□□ 0.31
CACNA1C-211ENST00000399617 CEBPAP49715 358 aaPredicted RBP16.98■□□□□ 0.31
CACNA1C-211ENST00000399617 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
CACNA1C-211ENST00000399617 NESP48681 1621 aa16.97■□□□□ 0.31
CACNA1C-211ENST00000399617 GBP4Q96PP9 640 aa16.96■□□□□ 0.31
CACNA1C-211ENST00000399617 CCER2I3L3R5 266 aa16.96■□□□□ 0.31
CACNA1C-211ENST00000399617 RRP12Q5JTH9 1297 aaKnown RBP16.96■□□□□ 0.31
CACNA1C-211ENST00000399617 CHMP4BP1P59074 171 aa16.96■□□□□ 0.31
CACNA1C-211ENST00000399617 ZKSCAN2Q63HK3 967 aa16.96■□□□□ 0.31
CACNA1C-211ENST00000399617 CRBNQ96SW2 442 aa16.96■□□□□ 0.31
CACNA1C-211ENST00000399617 KIF15Q9NS87 1388 aa16.96■□□□□ 0.3
CACNA1C-211ENST00000399617 FAM161AQ3B820 660 aa16.95■□□□□ 0.3
CACNA1C-211ENST00000399617 PRDM11Q9NQV5 511 aa16.95■□□□□ 0.3
CACNA1C-211ENST00000399617 MYBBP1AQ9BQG0 1328 aaKnown RBP16.95■□□□□ 0.3
CACNA1C-211ENST00000399617 TRIM29Q14134 588 aa16.95■□□□□ 0.3
CACNA1C-211ENST00000399617 ANKLE2Q86XL3 938 aa16.95■□□□□ 0.3
CACNA1C-211ENST00000399617 ERICH2A1L162 156 aa16.95■□□□□ 0.3
CACNA1C-211ENST00000399617 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
CACNA1C-211ENST00000399617 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
CACNA1C-211ENST00000399617 USP47Q96K76 1375 aa16.94■□□□□ 0.3
CACNA1C-211ENST00000399617 THEMISQ8N1K5 641 aaPredicted RBP16.94■□□□□ 0.3
CACNA1C-211ENST00000399617 CPLX1O14810 134 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms