RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
CACNA1C-210ENST00000399606 TPM3P06753 285 aa13.49□□□□□ -0.25
CACNA1C-210ENST00000399606 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
CACNA1C-210ENST00000399606 C9orf78Q9NZ63 289 aaPredicted RBP13.49□□□□□ -0.25
CACNA1C-210ENST00000399606 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
CACNA1C-210ENST00000399606 SIN3AQ96ST3 1273 aa13.48□□□□□ -0.25
CACNA1C-210ENST00000399606 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-210ENST00000399606 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-210ENST00000399606 LRRFIP1Q32MZ4 808 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-210ENST00000399606 H3BQV1 296 aa13.48□□□□□ -0.25
CACNA1C-210ENST00000399606 ODF2Q5BJF6 829 aa13.48□□□□□ -0.25
CACNA1C-210ENST00000399606 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
CACNA1C-210ENST00000399606 IPO9Q96P70 1041 aaKnown RBP13.48□□□□□ -0.25
CACNA1C-210ENST00000399606 CHMP4BP1P59074 171 aa13.47□□□□□ -0.25
CACNA1C-210ENST00000399606 ERICH2A1L162 156 aa13.47□□□□□ -0.25
CACNA1C-210ENST00000399606 TSR1Q2NL82 804 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-210ENST00000399606 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
CACNA1C-210ENST00000399606 NUP155O75694 1391 aa13.47□□□□□ -0.25
CACNA1C-210ENST00000399606 KIF21BO75037 1637 aa13.47□□□□□ -0.25
CACNA1C-210ENST00000399606 ATP2B2Q01814 1243 aa13.46□□□□□ -0.25
CACNA1C-210ENST00000399606 TRIM29Q14134 588 aa13.46□□□□□ -0.25
CACNA1C-210ENST00000399606 ESCO1Q5FWF5 840 aa13.46□□□□□ -0.26
CACNA1C-210ENST00000399606 CARMIL1Q5VZK9 1371 aa13.46□□□□□ -0.26
CACNA1C-210ENST00000399606 RILPL2Q969X0 211 aa13.46□□□□□ -0.26
CACNA1C-210ENST00000399606 CSPP1Q1MSJ5 1256 aa13.45□□□□□ -0.26
CACNA1C-210ENST00000399606 FAM184AQ8NB25 1140 aa13.45□□□□□ -0.26
CACNA1C-210ENST00000399606 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-210ENST00000399606 MPHOSPH10O00566 681 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-210ENST00000399606 CCDC47Q96A33 483 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-210ENST00000399606 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
CACNA1C-210ENST00000399606 ZFYVE27Q5T4F4 411 aa13.45□□□□□ -0.26
CACNA1C-210ENST00000399606 CT47A1Q5JQC4 288 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-210ENST00000399606 CCDC146Q8IYE0 955 aa13.44□□□□□ -0.26
CACNA1C-210ENST00000399606 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
CACNA1C-210ENST00000399606 DDX58O95786 925 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-210ENST00000399606 PLCD3Q8N3E9 789 aa13.44□□□□□ -0.26
CACNA1C-210ENST00000399606 WIZO95785 1651 aa13.44□□□□□ -0.26
CACNA1C-210ENST00000399606 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
CACNA1C-210ENST00000399606 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-210ENST00000399606 ARHGAP35Q9NRY4 1499 aa13.43□□□□□ -0.26
CACNA1C-210ENST00000399606 AIMP1Q12904 312 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-210ENST00000399606 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-210ENST00000399606 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
CACNA1C-210ENST00000399606 GOLGA6L3A6NEY3 463 aa13.42□□□□□ -0.26
CACNA1C-210ENST00000399606 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
CACNA1C-210ENST00000399606 ANKRD30AQ9BXX3 1397 aa13.41□□□□□ -0.26
CACNA1C-210ENST00000399606 TRDNQ13061 729 aa13.4□□□□□ -0.26
CACNA1C-210ENST00000399606 RIC3Q7Z5B4 369 aa13.4□□□□□ -0.26
CACNA1C-210ENST00000399606 CCDC97Q96F63 343 aaPredicted RBP13.4□□□□□ -0.26
CACNA1C-210ENST00000399606 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-210ENST00000399606 DDX54Q8TDD1 881 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-210ENST00000399606 CPLX2Q6PUV4 134 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-210ENST00000399606 RWDD1Q9H446 243 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-210ENST00000399606 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-210ENST00000399606 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
CACNA1C-210ENST00000399606 RRBP1Q9P2E9 1410 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-210ENST00000399606 CA8P35219 290 aa13.38□□□□□ -0.27
CACNA1C-210ENST00000399606 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-210ENST00000399606 ZBED9Q6R2W3 1325 aa13.38□□□□□ -0.27
CACNA1C-210ENST00000399606 FOXD4L6Q3SYB3 417 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-210ENST00000399606 FOXD4L3Q6VB84 417 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-210ENST00000399606 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
CACNA1C-210ENST00000399606 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
CACNA1C-210ENST00000399606 NEUROD6Q96NK8 337 aa13.37□□□□□ -0.27
CACNA1C-210ENST00000399606 KDM4AO75164 1064 aa13.37□□□□□ -0.27
CACNA1C-210ENST00000399606 JPH4Q96JJ6 628 aa13.37□□□□□ -0.27
CACNA1C-210ENST00000399606 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
CACNA1C-210ENST00000399606 PHF14O94880 888 aa13.37□□□□□ -0.27
CACNA1C-210ENST00000399606 CLUAP1Q96AJ1 413 aa13.37□□□□□ -0.27
CACNA1C-210ENST00000399606 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
CACNA1C-210ENST00000399606 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
CACNA1C-210ENST00000399606 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-210ENST00000399606 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-210ENST00000399606 BCCIPQ9P287 314 aaKnown RBP eCLIP13.36□□□□□ -0.27
CACNA1C-210ENST00000399606 RRP7AQ9Y3A4 280 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-210ENST00000399606 CCDC70Q6NSX1 233 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 CPLX1O14810 134 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 EPS15P42566 896 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 SLKQ9H2G2 1235 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 TPM1P09493 284 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
CACNA1C-210ENST00000399606 G3BP1Q13283 466 aaKnown RBP eCLIP13.34□□□□□ -0.27
CACNA1C-210ENST00000399606 EVC2Q86UK5 1308 aa13.34□□□□□ -0.27
CACNA1C-210ENST00000399606 FOSBP53539 338 aa13.34□□□□□ -0.27
CACNA1C-210ENST00000399606 ADAMTS2O95450 1211 aa13.34□□□□□ -0.27
CACNA1C-210ENST00000399606 GPS2Q13227 327 aa13.34□□□□□ -0.27
CACNA1C-210ENST00000399606 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
CACNA1C-210ENST00000399606 SMARCA4P51532 1647 aa13.33□□□□□ -0.27
CACNA1C-210ENST00000399606 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
CACNA1C-210ENST00000399606 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-210ENST00000399606 ABTB2Q8N961 1025 aa13.33□□□□□ -0.28
CACNA1C-210ENST00000399606 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
CACNA1C-210ENST00000399606 MATR3P43243 847 aaKnown RBP eCLIP13.32□□□□□ -0.28
CACNA1C-210ENST00000399606 TXNDC2Q86VQ3 553 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms