RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
PTPN6-202ENST00000399448 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
PTPN6-202ENST00000399448 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
PTPN6-202ENST00000399448 SYNMO15061 1565 aa18.29■□□□□ 0.52
PTPN6-202ENST00000399448 MAP3K4Q9Y6R4 1608 aa18.29■□□□□ 0.52
PTPN6-202ENST00000399448 CFAP74Q9C0B2 1584 aa18.28■□□□□ 0.52
PTPN6-202ENST00000399448 CD109Q6YHK3 1445 aa18.28■□□□□ 0.52
PTPN6-202ENST00000399448 KIF1BO60333 1816 aa18.28■□□□□ 0.52
PTPN6-202ENST00000399448 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
PTPN6-202ENST00000399448 UGGT1Q9NYU2 1555 aa18.27■□□□□ 0.52
PTPN6-202ENST00000399448 AMER1Q5JTC6 1135 aaPredicted RBP18.27■□□□□ 0.52
PTPN6-202ENST00000399448 PPRC1Q5VV67 1664 aaKnown RBP18.27■□□□□ 0.51
PTPN6-202ENST00000399448 CFAP70Q5T0N1 1121 aa18.27■□□□□ 0.51
PTPN6-202ENST00000399448 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.51
PTPN6-202ENST00000399448 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.51
PTPN6-202ENST00000399448 SALL2Q9Y467 1007 aaPredicted RBP18.27■□□□□ 0.51
PTPN6-202ENST00000399448 MLH3Q9UHC1 1453 aa18.26■□□□□ 0.51
PTPN6-202ENST00000399448 POGZQ7Z3K3 1410 aa18.26■□□□□ 0.51
PTPN6-202ENST00000399448 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
PTPN6-202ENST00000399448 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
PTPN6-202ENST00000399448 RRP1P56182 461 aaKnown RBP18.25■□□□□ 0.51
PTPN6-202ENST00000399448 NPC1L1Q9UHC9 1359 aa18.24■□□□□ 0.51
PTPN6-202ENST00000399448 ASXL1Q8IXJ9 1541 aa18.24■□□□□ 0.51
PTPN6-202ENST00000399448 ABCA6Q8N139 1617 aa18.24■□□□□ 0.51
PTPN6-202ENST00000399448 IFT172Q9UG01 1749 aa18.23■□□□□ 0.51
PTPN6-202ENST00000399448 NRXN1Q9ULB1 1477 aa18.23■□□□□ 0.51
PTPN6-202ENST00000399448 KDM5AP29375 1690 aaKnown RBP18.21■□□□□ 0.51
PTPN6-202ENST00000399448 CDCA7LQ96GN5 454 aa18.21■□□□□ 0.51
PTPN6-202ENST00000399448 ADAMTS8Q9UP79 889 aa18.21■□□□□ 0.51
PTPN6-202ENST00000399448 MYOM1P52179 1685 aa18.21■□□□□ 0.5
PTPN6-202ENST00000399448 FRMPD1Q5SYB0 1578 aa18.2■□□□□ 0.5
PTPN6-202ENST00000399448 HECW2Q9P2P5 1572 aa18.2■□□□□ 0.5
PTPN6-202ENST00000399448 ADGRB3O60242 1522 aa18.2■□□□□ 0.5
PTPN6-202ENST00000399448 MROH2AA6NES4 1674 aa18.2■□□□□ 0.5
PTPN6-202ENST00000399448 ERVK-7P63135 1459 aa18.19■□□□□ 0.5
PTPN6-202ENST00000399448 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
PTPN6-202ENST00000399448 NPATQ14207 1427 aa18.18■□□□□ 0.5
PTPN6-202ENST00000399448 WDR43Q15061 677 aaKnown RBP eCLIP18.18■□□□□ 0.5
PTPN6-202ENST00000399448 GGT6Q6P531 493 aa18.18■□□□□ 0.5
PTPN6-202ENST00000399448 NOS1P29475 1434 aa18.17■□□□□ 0.5
PTPN6-202ENST00000399448 SBNO2Q9Y2G9 1366 aa18.17■□□□□ 0.5
PTPN6-202ENST00000399448 NEO1Q92859 1461 aa18.17■□□□□ 0.5
PTPN6-202ENST00000399448 SETBP1Q9Y6X0 1596 aa18.17■□□□□ 0.5
PTPN6-202ENST00000399448 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
PTPN6-202ENST00000399448 RPGRIP1LQ68CZ1 1315 aa18.16■□□□□ 0.5
PTPN6-202ENST00000399448 MSH5O43196 834 aa18.15■□□□□ 0.5
PTPN6-202ENST00000399448 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
PTPN6-202ENST00000399448 EXOC6Q8TAG9 804 aa18.14■□□□□ 0.49
PTPN6-202ENST00000399448 C14orf93Q9H972 538 aaKnown RBP18.14■□□□□ 0.49
PTPN6-202ENST00000399448 ABCC3O15438 1527 aa18.13■□□□□ 0.49
PTPN6-202ENST00000399448 CENPJQ9HC77 1338 aaPredicted RBP18.12■□□□□ 0.49
PTPN6-202ENST00000399448 PPLO60437 1756 aa18.11■□□□□ 0.49
PTPN6-202ENST00000399448 CARD14Q9BXL6 1004 aa18.11■□□□□ 0.49
PTPN6-202ENST00000399448 RAPGEF3O95398 923 aa18.1■□□□□ 0.49
PTPN6-202ENST00000399448 PLEKHH1Q9ULM0 1364 aa18.08■□□□□ 0.49
PTPN6-202ENST00000399448 ZNF521Q96K83 1311 aa18.08■□□□□ 0.49
PTPN6-202ENST00000399448 CFAP65Q6ZU64 1925 aaKnown RBP18.08■□□□□ 0.49
PTPN6-202ENST00000399448 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
PTPN6-202ENST00000399448 CAMSAP1Q5T5Y3 1602 aa18.08■□□□□ 0.48
PTPN6-202ENST00000399448 ADGRB1O14514 1584 aa18.07■□□□□ 0.48
PTPN6-202ENST00000399448 GOLGA2Q08379 1002 aa18.06■□□□□ 0.48
PTPN6-202ENST00000399448 DIP2CQ9Y2E4 1556 aa18.06■□□□□ 0.48
PTPN6-202ENST00000399448 DUSP27Q5VZP5 1158 aa18.05■□□□□ 0.48
PTPN6-202ENST00000399448 ARHGAP31Q2M1Z3 1444 aa18.04■□□□□ 0.48
PTPN6-202ENST00000399448 VGFO15240 615 aaPredicted RBP18.04■□□□□ 0.48
PTPN6-202ENST00000399448 PLIN1O60240 522 aa18.04■□□□□ 0.48
PTPN6-202ENST00000399448 PIK3C2BO00750 1634 aa18.03■□□□□ 0.48
PTPN6-202ENST00000399448 TMEM132EQ6IEE7 984 aa18.03■□□□□ 0.48
PTPN6-202ENST00000399448 SIGLEC1Q9BZZ2 1709 aa18.03■□□□□ 0.48
PTPN6-202ENST00000399448 ZC3H13Q5T200 1668 aaKnown RBP18.03■□□□□ 0.48
PTPN6-202ENST00000399448 QRICH2Q9H0J4 1663 aa18.02■□□□□ 0.48
PTPN6-202ENST00000399448 SLFN5Q08AF3 891 aa18.02■□□□□ 0.48
PTPN6-202ENST00000399448 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
PTPN6-202ENST00000399448 PUS7Q96PZ0 661 aaKnown RBP18.02■□□□□ 0.48
PTPN6-202ENST00000399448 ERICH6Q7L0X2 663 aa18.01■□□□□ 0.47
PTPN6-202ENST00000399448 RICTORQ6R327 1708 aa18.01■□□□□ 0.47
PTPN6-202ENST00000399448 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
PTPN6-202ENST00000399448 TCERG1O14776 1098 aaKnown RBP18.01■□□□□ 0.47
PTPN6-202ENST00000399448 CRBNQ96SW2 442 aa18.01■□□□□ 0.47
PTPN6-202ENST00000399448 CCDC146Q8IYE0 955 aa18■□□□□ 0.47
PTPN6-202ENST00000399448 TRMT2AQ8IZ69 625 aaKnown RBP18■□□□□ 0.47
PTPN6-202ENST00000399448 SLC12A5Q9H2X9 1139 aa18■□□□□ 0.47
PTPN6-202ENST00000399448 NSD3Q9BZ95 1437 aa18■□□□□ 0.47
PTPN6-202ENST00000399448 NEXMIFQ5QGS0 1516 aa17.99■□□□□ 0.47
PTPN6-202ENST00000399448 APAF1O14727 1248 aa17.99■□□□□ 0.47
PTPN6-202ENST00000399448 SLC52A1Q9NWF4 448 aa17.99■□□□□ 0.47
PTPN6-202ENST00000399448 IDI1Q13907 227 aa17.98■□□□□ 0.47
PTPN6-202ENST00000399448 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
PTPN6-202ENST00000399448 GLI2P10070 1586 aa17.97■□□□□ 0.47
PTPN6-202ENST00000399448 ZFYVE9O95405 1425 aa17.97■□□□□ 0.47
PTPN6-202ENST00000399448 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
PTPN6-202ENST00000399448 EVC2Q86UK5 1308 aa17.97■□□□□ 0.47
PTPN6-202ENST00000399448 YEATS2Q9ULM3 1422 aa17.96■□□□□ 0.47
PTPN6-202ENST00000399448 MS4A1P11836 297 aa17.95■□□□□ 0.46
PTPN6-202ENST00000399448 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
PTPN6-202ENST00000399448 E9PSI1 815 aa17.94■□□□□ 0.46
PTPN6-202ENST00000399448 C20orf194Q5TEA3 1177 aa17.94■□□□□ 0.46
PTPN6-202ENST00000399448 USP32Q8NFA0 1604 aa17.94■□□□□ 0.46
PTPN6-202ENST00000399448 ANP32AP39687 249 aaKnown RBP17.93■□□□□ 0.46
PTPN6-202ENST00000399448 CGNL1Q0VF96 1302 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms