RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 NOP58Q9Y2X3 529 aaKnown RBP15.53■□□□□ 0.08
ITSN1-211ENST00000399355 ARID4BQ4LE39 1312 aaPredicted RBP15.53■□□□□ 0.08
ITSN1-211ENST00000399355 ABCC1P33527 1531 aa15.52■□□□□ 0.08
ITSN1-211ENST00000399355 MLECQ14165 292 aa15.52■□□□□ 0.08
ITSN1-211ENST00000399355 CABP2Q9NPB3 220 aa15.52■□□□□ 0.08
ITSN1-211ENST00000399355 CLUAP1Q96AJ1 413 aa15.52■□□□□ 0.07
ITSN1-211ENST00000399355 DUSP27Q5VZP5 1158 aa15.52■□□□□ 0.07
ITSN1-211ENST00000399355 FRAT1Q92837 279 aaPredicted RBP15.52■□□□□ 0.07
ITSN1-211ENST00000399355 DUOX2Q9NRD8 1548 aa15.51■□□□□ 0.07
ITSN1-211ENST00000399355 GPRASP1Q5JY77 1395 aa15.51■□□□□ 0.07
ITSN1-211ENST00000399355 ADGRL1O94910 1474 aa15.51■□□□□ 0.07
ITSN1-211ENST00000399355 PRDM15P57071 1507 aaPredicted RBP15.51■□□□□ 0.07
ITSN1-211ENST00000399355 MAST1Q9Y2H9 1570 aa15.51■□□□□ 0.07
ITSN1-211ENST00000399355 UNC13BO14795 1591 aa15.51■□□□□ 0.07
ITSN1-211ENST00000399355 PDE4AP27815 886 aa15.5■□□□□ 0.07
ITSN1-211ENST00000399355 IQGAP3Q86VI3 1631 aa15.5■□□□□ 0.07
ITSN1-211ENST00000399355 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
ITSN1-211ENST00000399355 PANK1Q8TE04 598 aa15.49■□□□□ 0.07
ITSN1-211ENST00000399355 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
ITSN1-211ENST00000399355 CYB5RLQ6IPT4 315 aa15.49■□□□□ 0.07
ITSN1-211ENST00000399355 NOS1P29475 1434 aa15.49■□□□□ 0.07
ITSN1-211ENST00000399355 FBXO31Q5XUX0 539 aaPredicted RBP15.48■□□□□ 0.07
ITSN1-211ENST00000399355 ZFYVE16Q7Z3T8 1539 aa15.48■□□□□ 0.07
ITSN1-211ENST00000399355 WASHC2CQ9Y4E1 1318 aa15.48■□□□□ 0.07
ITSN1-211ENST00000399355 COG6Q9Y2V7 657 aa15.45■□□□□ 0.06
ITSN1-211ENST00000399355 ANP32AP39687 249 aaKnown RBP15.45■□□□□ 0.06
ITSN1-211ENST00000399355 ERICH6BQ5W0A0 696 aa15.45■□□□□ 0.06
ITSN1-211ENST00000399355 PPM1GO15355 546 aaPredicted RBP15.45■□□□□ 0.06
ITSN1-211ENST00000399355 MADDQ8WXG6 1647 aa15.44■□□□□ 0.06
ITSN1-211ENST00000399355 GGNBP2Q9H3C7 697 aa15.44■□□□□ 0.06
ITSN1-211ENST00000399355 DEKP35659 375 aaKnown RBP15.44■□□□□ 0.06
ITSN1-211ENST00000399355 GOLGA2Q08379 1002 aa15.44■□□□□ 0.06
ITSN1-211ENST00000399355 MINK1Q8N4C8 1332 aaPredicted RBP15.44■□□□□ 0.06
ITSN1-211ENST00000399355 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
ITSN1-211ENST00000399355 MTHFSP49914 203 aa15.43■□□□□ 0.06
ITSN1-211ENST00000399355 ZBTB47Q9UFB7 747 aaPredicted RBP15.43■□□□□ 0.06
ITSN1-211ENST00000399355 PLXNC1O60486 1568 aa15.42■□□□□ 0.06
ITSN1-211ENST00000399355 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
ITSN1-211ENST00000399355 IPO9Q96P70 1041 aaKnown RBP15.42■□□□□ 0.06
ITSN1-211ENST00000399355 TSR2Q969E8 191 aaKnown RBP15.42■□□□□ 0.06
ITSN1-211ENST00000399355 NUTM2FA1L443 756 aa15.41■□□□□ 0.06
ITSN1-211ENST00000399355 IGHDP01880 384 aa15.41■□□□□ 0.06
ITSN1-211ENST00000399355 CLASP1Q7Z460 1538 aa15.41■□□□□ 0.06
ITSN1-211ENST00000399355 NCKAP5LQ9HCH0 1330 aa15.41■□□□□ 0.06
ITSN1-211ENST00000399355 MORC1Q86VD1 984 aa15.41■□□□□ 0.06
ITSN1-211ENST00000399355 SCAF11Q99590 1463 aaKnown RBP15.41■□□□□ 0.06
ITSN1-211ENST00000399355 TCERG1O14776 1098 aaKnown RBP15.4■□□□□ 0.06
ITSN1-211ENST00000399355 MYT1Q01538 1121 aa15.4■□□□□ 0.06
ITSN1-211ENST00000399355 KANK1Q14678 1352 aa15.4■□□□□ 0.06
ITSN1-211ENST00000399355 ERVK-7P63135 1459 aa15.4■□□□□ 0.06
ITSN1-211ENST00000399355 IDI1Q13907 227 aa15.4■□□□□ 0.06
ITSN1-211ENST00000399355 MROH2AA6NES4 1674 aa15.39■□□□□ 0.05
ITSN1-211ENST00000399355 NSD3Q9BZ95 1437 aa15.39■□□□□ 0.05
ITSN1-211ENST00000399355 U2SURPO15042 1029 aaKnown RBP15.39■□□□□ 0.05
ITSN1-211ENST00000399355 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
ITSN1-211ENST00000399355 BLMP54132 1417 aaPredicted RBP15.39■□□□□ 0.05
ITSN1-211ENST00000399355 CENPJQ9HC77 1338 aaPredicted RBP15.39■□□□□ 0.05
ITSN1-211ENST00000399355 RLBP1P12271 317 aa15.39■□□□□ 0.05
ITSN1-211ENST00000399355 BACH2Q9BYV9 841 aa15.39■□□□□ 0.05
ITSN1-211ENST00000399355 SPHKAPQ2M3C7 1700 aa15.39■□□□□ 0.05
ITSN1-211ENST00000399355 SLFN5Q08AF3 891 aa15.38■□□□□ 0.05
ITSN1-211ENST00000399355 CEP152O94986 1710 aa15.38■□□□□ 0.05
ITSN1-211ENST00000399355 SRPK2P78362 688 aaKnown RBP15.38■□□□□ 0.05
ITSN1-211ENST00000399355 NPATQ14207 1427 aa15.37■□□□□ 0.05
ITSN1-211ENST00000399355 CANXP27824 592 aaKnown RBP15.37■□□□□ 0.05
ITSN1-211ENST00000399355 SEC24BO95487 1268 aa15.37■□□□□ 0.05
ITSN1-211ENST00000399355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.37■□□□□ 0.05
ITSN1-211ENST00000399355 TCP11L2Q8N4U5 519 aa15.36■□□□□ 0.05
ITSN1-211ENST00000399355 U2AF1L5P0DN76 240 aaPredicted RBP15.36■□□□□ 0.05
ITSN1-211ENST00000399355 U2AF1Q01081 240 aaKnown RBP eCLIP15.36■□□□□ 0.05
ITSN1-211ENST00000399355 ABCA6Q8N139 1617 aa15.36■□□□□ 0.05
ITSN1-211ENST00000399355 ZNF521Q96K83 1311 aa15.35■□□□□ 0.05
ITSN1-211ENST00000399355 TRPM2O94759 1503 aa15.35■□□□□ 0.05
ITSN1-211ENST00000399355 WAPLQ7Z5K2 1190 aa15.35■□□□□ 0.05
ITSN1-211ENST00000399355 MYOM1P52179 1685 aa15.35■□□□□ 0.05
ITSN1-211ENST00000399355 WWC1Q8IX03 1113 aa15.35■□□□□ 0.05
ITSN1-211ENST00000399355 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
ITSN1-211ENST00000399355 CD109Q6YHK3 1445 aa15.34■□□□□ 0.05
ITSN1-211ENST00000399355 SOX12O15370 315 aa15.34■□□□□ 0.05
ITSN1-211ENST00000399355 THUMPD2Q9BTF0 503 aaKnown RBP15.34■□□□□ 0.05
ITSN1-211ENST00000399355 MROH1Q8NDA8 1641 aa15.34■□□□□ 0.05
ITSN1-211ENST00000399355 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
ITSN1-211ENST00000399355 PPRC1Q5VV67 1664 aaKnown RBP15.34■□□□□ 0.05
ITSN1-211ENST00000399355 PTPRTO14522 1441 aa15.34■□□□□ 0.05
ITSN1-211ENST00000399355 ASXL1Q8IXJ9 1541 aa15.33■□□□□ 0.04
ITSN1-211ENST00000399355 KIDINS220Q9ULH0 1771 aa15.33■□□□□ 0.04
ITSN1-211ENST00000399355 PDE3BQ13370 1112 aa15.33■□□□□ 0.04
ITSN1-211ENST00000399355 IQGAP1P46940 1657 aa15.33■□□□□ 0.04
ITSN1-211ENST00000399355 YEATS2Q9ULM3 1422 aa15.33■□□□□ 0.04
ITSN1-211ENST00000399355 ZMYM4Q5VZL5 1548 aa15.33■□□□□ 0.04
ITSN1-211ENST00000399355 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
ITSN1-211ENST00000399355 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
ITSN1-211ENST00000399355 ELL2O00472 640 aaPredicted RBP15.32■□□□□ 0.04
ITSN1-211ENST00000399355 PRAM1Q96QH2 718 aa15.31■□□□□ 0.04
ITSN1-211ENST00000399355 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
ITSN1-211ENST00000399355 NEFMP07197 916 aa15.31■□□□□ 0.04
ITSN1-211ENST00000399355 EIF2AK4Q9P2K8 1649 aaKnown RBP15.29■□□□□ 0.04
ITSN1-211ENST00000399355 ARXQ96QS3 562 aa15.28■□□□□ 0.04
ITSN1-211ENST00000399355 HMOX1P09601 288 aa15.28■□□□□ 0.04
ITSN1-211ENST00000399355 KDM2BQ8NHM5 1336 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms