RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 DUSP27Q5VZP5 1158 aa18.24■□□□□ 0.51
APOB-202ENST00000399256 ARAP3Q8WWN8 1544 aa18.24■□□□□ 0.51
APOB-202ENST00000399256 GPRASP1Q5JY77 1395 aa18.22■□□□□ 0.51
APOB-202ENST00000399256 A2MP01023 1474 aa18.22■□□□□ 0.51
APOB-202ENST00000399256 TMF1P82094 1093 aa18.22■□□□□ 0.51
APOB-202ENST00000399256 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
APOB-202ENST00000399256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.511e-59■□□□□ 9.2
APOB-202ENST00000399256 SYCP2Q9BX26 1530 aa18.21■□□□□ 0.51
APOB-202ENST00000399256 PRDM15P57071 1507 aaPredicted RBP18.2■□□□□ 0.5
APOB-202ENST00000399256 GOLGA2Q08379 1002 aa18.18■□□□□ 0.5
APOB-202ENST00000399256 CCDC141Q6ZP82 1450 aa18.18■□□□□ 0.5
APOB-202ENST00000399256 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
APOB-202ENST00000399256 PPP2R1AP30153 589 aa18.18■□□□□ 0.5
APOB-202ENST00000399256 ABCC1P33527 1531 aa18.17■□□□□ 0.5
APOB-202ENST00000399256 PLA2R1Q13018 1463 aa18.17■□□□□ 0.5
APOB-202ENST00000399256 EFCAB2Q5VUJ9 269 aa18.17■□□□□ 0.5
APOB-202ENST00000399256 KNSTRNQ9Y448 316 aa18.15■□□□□ 0.5
APOB-202ENST00000399256 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
APOB-202ENST00000399256 EIF5BO60841 1220 aaKnown RBP18.14■□□□□ 0.5
APOB-202ENST00000399256 CCDC146Q8IYE0 955 aa18.14■□□□□ 0.5
APOB-202ENST00000399256 FANCAO15360 1455 aa18.14■□□□□ 0.49
APOB-202ENST00000399256 MAGI2Q86UL8 1455 aa18.14■□□□□ 0.49
APOB-202ENST00000399256 LAMC1P11047 1609 aa18.14■□□□□ 0.49
APOB-202ENST00000399256 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
APOB-202ENST00000399256 SLFN5Q08AF3 891 aa18.12■□□□□ 0.49
APOB-202ENST00000399256 MAST1Q9Y2H9 1570 aa18.12■□□□□ 0.49
APOB-202ENST00000399256 BCAR3O75815 825 aa18.11■□□□□ 0.49
APOB-202ENST00000399256 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
APOB-202ENST00000399256 CD109Q6YHK3 1445 aa18.1■□□□□ 0.49
APOB-202ENST00000399256 EIF2AK4Q9P2K8 1649 aaKnown RBP18.09■□□□□ 0.49
APOB-202ENST00000399256 AMER1Q5JTC6 1135 aaPredicted RBP18.09■□□□□ 0.49
APOB-202ENST00000399256 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
APOB-202ENST00000399256 IGHDP01880 384 aa18.08■□□□□ 0.49
APOB-202ENST00000399256 GLI2P10070 1586 aa18.08■□□□□ 0.48
APOB-202ENST00000399256 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
APOB-202ENST00000399256 APAF1O14727 1248 aa18.07■□□□□ 0.48
APOB-202ENST00000399256 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
APOB-202ENST00000399256 USP19O94966 1318 aa18.06■□□□□ 0.48
APOB-202ENST00000399256 CFAP74Q9C0B2 1584 aa18.06■□□□□ 0.48
APOB-202ENST00000399256 ADGRL1O94910 1474 aa18.06■□□□□ 0.48
APOB-202ENST00000399256 SEC24BO95487 1268 aa18.06■□□□□ 0.48
APOB-202ENST00000399256 POGKQ9P215 609 aa18.06■□□□□ 0.48
APOB-202ENST00000399256 DIP2BQ9P265 1576 aa18.06■□□□□ 0.48
APOB-202ENST00000399256 PLXNC1O60486 1568 aa18.05■□□□□ 0.48
APOB-202ENST00000399256 TRMT2AQ8IZ69 625 aaKnown RBP18.05■□□□□ 0.48
APOB-202ENST00000399256 UNC13BO14795 1591 aa18.04■□□□□ 0.48
APOB-202ENST00000399256 NKTRP30414 1462 aaKnown RBP18.04■□□□□ 0.48
APOB-202ENST00000399256 SLKQ9H2G2 1235 aaPredicted RBP18.04■□□□□ 0.48
APOB-202ENST00000399256 FAM43AQ8N2R8 423 aa18.04■□□□□ 0.48
APOB-202ENST00000399256 SCAPERQ9BY12 1400 aa18.03■□□□□ 0.48
APOB-202ENST00000399256 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
APOB-202ENST00000399256 RNF17Q9BXT8 1623 aaKnown RBP18.01■□□□□ 0.47
APOB-202ENST00000399256 ZFYVE16Q7Z3T8 1539 aa18.01■□□□□ 0.47
APOB-202ENST00000399256 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
APOB-202ENST00000399256 CANXP27824 592 aaKnown RBP18■□□□□ 0.47
APOB-202ENST00000399256 AFAP1Q8N556 730 aa18■□□□□ 0.47
APOB-202ENST00000399256 PIK3C2GO75747 1445 aa18■□□□□ 0.47
APOB-202ENST00000399256 PANK1Q8TE04 598 aa18■□□□□ 0.47
APOB-202ENST00000399256 COG6Q9Y2V7 657 aa18■□□□□ 0.47
APOB-202ENST00000399256 IQGAP3Q86VI3 1631 aa17.99■□□□□ 0.47
APOB-202ENST00000399256 NEO1Q92859 1461 aa17.99■□□□□ 0.47
APOB-202ENST00000399256 E9PSI1 815 aa17.99■□□□□ 0.47
APOB-202ENST00000399256 INO80Q9ULG1 1556 aaPredicted RBP17.99■□□□□ 0.47
APOB-202ENST00000399256 BECN1Q14457 450 aa17.98■□□□□ 0.47
APOB-202ENST00000399256 UBE2Q2Q8WVN8 375 aa17.98■□□□□ 0.47
APOB-202ENST00000399256 VIRMAQ69YN4 1812 aaKnown RBP17.98■□□□□ 0.47
APOB-202ENST00000399256 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
APOB-202ENST00000399256 CLUAP1Q96AJ1 413 aa17.98■□□□□ 0.47
APOB-202ENST00000399256 SPAG9O60271 1321 aaKnown RBP17.97■□□□□ 0.47
APOB-202ENST00000399256 SYNMO15061 1565 aa17.97■□□□□ 0.47
APOB-202ENST00000399256 CGNL1Q0VF96 1302 aa17.97■□□□□ 0.47
APOB-202ENST00000399256 FAM69CQ0P6D2 419 aa17.97■□□□□ 0.47
APOB-202ENST00000399256 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
APOB-202ENST00000399256 DUOX2Q9NRD8 1548 aa17.96■□□□□ 0.47
APOB-202ENST00000399256 MAPK8IP3Q9UPT6 1336 aa17.96■□□□□ 0.47
APOB-202ENST00000399256 ARXQ96QS3 562 aa17.96■□□□□ 0.47
APOB-202ENST00000399256 RSPH6AQ9H0K4 717 aa17.96■□□□□ 0.47
APOB-202ENST00000399256 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
APOB-202ENST00000399256 CENPJQ9HC77 1338 aaPredicted RBP17.95■□□□□ 0.46
APOB-202ENST00000399256 ZNF518AQ6AHZ1 1483 aa17.95■□□□□ 0.46
APOB-202ENST00000399256 KIF13AQ9H1H9 1805 aa17.95■□□□□ 0.46
APOB-202ENST00000399256 POGZQ7Z3K3 1410 aa17.95■□□□□ 0.46
APOB-202ENST00000399256 IQGAP1P46940 1657 aa17.94■□□□□ 0.46
APOB-202ENST00000399256 PPRC1Q5VV67 1664 aaKnown RBP17.94■□□□□ 0.46
APOB-202ENST00000399256 PDE3AQ14432 1141 aa17.94■□□□□ 0.46
APOB-202ENST00000399256 ATP10AO60312 1499 aa17.94■□□□□ 0.46
APOB-202ENST00000399256 MADDQ8WXG6 1647 aa17.93■□□□□ 0.46
APOB-202ENST00000399256 NLRP1Q9C000 1473 aa17.93■□□□□ 0.46
APOB-202ENST00000399256 RRAGDQ9NQL2 400 aaPredicted RBP17.92■□□□□ 0.46
APOB-202ENST00000399256 KIDINS220Q9ULH0 1771 aa17.92■□□□□ 0.46
APOB-202ENST00000399256 TSPOAP1O95153 1857 aa17.92■□□□□ 0.46
APOB-202ENST00000399256 SCAF11Q99590 1463 aaKnown RBP17.92■□□□□ 0.46
APOB-202ENST00000399256 MYOM1P52179 1685 aa17.91■□□□□ 0.46
APOB-202ENST00000399256 ANTXR1Q9H6X2 564 aa17.91■□□□□ 0.46
APOB-202ENST00000399256 NEUROD2Q15784 382 aa17.9■□□□□ 0.46
APOB-202ENST00000399256 SPRYD3Q8NCJ5 442 aa17.9■□□□□ 0.46
APOB-202ENST00000399256 NPC1L1Q9UHC9 1359 aa17.89■□□□□ 0.45
APOB-202ENST00000399256 L1TD1Q5T7N2 865 aaKnown RBP17.89■□□□□ 0.45
APOB-202ENST00000399256 TNNQ9UQP3 1299 aa17.89■□□□□ 0.45
APOB-202ENST00000399256 WWC1Q8IX03 1113 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms