RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 TMF1P82094 1093 aa15.99■□□□□ 0.15
COL25A1-202ENST00000399127 MLECQ14165 292 aa15.99■□□□□ 0.15
COL25A1-202ENST00000399127 ZBED9Q6R2W3 1325 aa15.97■□□□□ 0.15
COL25A1-202ENST00000399127 ADGRF5Q8IZF2 1346 aa15.96■□□□□ 0.15
COL25A1-202ENST00000399127 PANK3Q9H999 370 aa15.96■□□□□ 0.15
COL25A1-202ENST00000399127 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.14
COL25A1-202ENST00000399127 CFAP70Q5T0N1 1121 aa15.96■□□□□ 0.14
COL25A1-202ENST00000399127 ABCC3O15438 1527 aa15.95■□□□□ 0.14
COL25A1-202ENST00000399127 LMTK2Q8IWU2 1503 aa15.95■□□□□ 0.14
COL25A1-202ENST00000399127 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
COL25A1-202ENST00000399127 PER1O15534 1290 aaPredicted RBP15.95■□□□□ 0.14
COL25A1-202ENST00000399127 PNISRQ8TF01 805 aaKnown RBP15.95■□□□□ 0.14
COL25A1-202ENST00000399127 NPATQ14207 1427 aa15.95■□□□□ 0.14
COL25A1-202ENST00000399127 RALBP1Q15311 655 aa15.94■□□□□ 0.14
COL25A1-202ENST00000399127 KIF1BO60333 1816 aa15.94■□□□□ 0.14
COL25A1-202ENST00000399127 MROH2AA6NES4 1674 aa15.94■□□□□ 0.14
COL25A1-202ENST00000399127 IQGAP1P46940 1657 aa15.94■□□□□ 0.14
COL25A1-202ENST00000399127 KTN1Q86UP2 1357 aaKnown RBP15.93■□□□□ 0.14
COL25A1-202ENST00000399127 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
COL25A1-202ENST00000399127 SCAF11Q99590 1463 aaKnown RBP15.93■□□□□ 0.14
COL25A1-202ENST00000399127 STAC3Q96MF2 364 aa15.92■□□□□ 0.14
COL25A1-202ENST00000399127 PARD3Q8TEW0 1356 aa15.9■□□□□ 0.14
COL25A1-202ENST00000399127 BRD4O60885 1362 aaPredicted RBP15.9■□□□□ 0.14
COL25A1-202ENST00000399127 CAMSAP1Q5T5Y3 1602 aa15.9■□□□□ 0.14
COL25A1-202ENST00000399127 NOS1P29475 1434 aa15.89■□□□□ 0.13
COL25A1-202ENST00000399127 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
COL25A1-202ENST00000399127 NLRP13Q86W25 1043 aa15.88■□□□□ 0.13
COL25A1-202ENST00000399127 MYOM2P54296 1465 aa15.87■□□□□ 0.13
COL25A1-202ENST00000399127 FBXO31Q5XUX0 539 aaPredicted RBP15.87■□□□□ 0.13
COL25A1-202ENST00000399127 ESF1Q9H501 851 aaKnown RBP15.87■□□□□ 0.13
COL25A1-202ENST00000399127 NEURL4Q96JN8 1562 aa15.87■□□□□ 0.13
COL25A1-202ENST00000399127 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
COL25A1-202ENST00000399127 ADGRB3O60242 1522 aa15.87■□□□□ 0.13
COL25A1-202ENST00000399127 IFT172Q9UG01 1749 aa15.86■□□□□ 0.13
COL25A1-202ENST00000399127 ARHGEF40Q8TER5 1519 aa15.86■□□□□ 0.13
COL25A1-202ENST00000399127 EIF3AQ14152 1382 aaKnown RBP15.86■□□□□ 0.13
COL25A1-202ENST00000399127 SALL2Q9Y467 1007 aaPredicted RBP15.85■□□□□ 0.13
COL25A1-202ENST00000399127 SIGLEC1Q9BZZ2 1709 aa15.85■□□□□ 0.13
COL25A1-202ENST00000399127 KIAA1210Q9ULL0 1709 aa15.85■□□□□ 0.13
COL25A1-202ENST00000399127 LRPPRCP42704 1394 aaKnown RBP15.84■□□□□ 0.13
COL25A1-202ENST00000399127 AGLP35573 1532 aa15.84■□□□□ 0.13
COL25A1-202ENST00000399127 REREQ9P2R6 1566 aa15.84■□□□□ 0.13
COL25A1-202ENST00000399127 IDI1Q13907 227 aa15.84■□□□□ 0.13
COL25A1-202ENST00000399127 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
COL25A1-202ENST00000399127 ZC3H13Q5T200 1668 aaKnown RBP15.83■□□□□ 0.12
COL25A1-202ENST00000399127 TMEM132EQ6IEE7 984 aa15.83■□□□□ 0.12
COL25A1-202ENST00000399127 ARHGAP31Q2M1Z3 1444 aa15.83■□□□□ 0.12
COL25A1-202ENST00000399127 CDCA8Q53HL2 280 aa15.83■□□□□ 0.12
COL25A1-202ENST00000399127 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
COL25A1-202ENST00000399127 TRAK1Q9UPV9 953 aa15.82■□□□□ 0.12
COL25A1-202ENST00000399127 NRXN1Q9ULB1 1477 aa15.81■□□□□ 0.12
COL25A1-202ENST00000399127 ANO8Q9HCE9 1232 aaPredicted RBP15.81■□□□□ 0.12
COL25A1-202ENST00000399127 SYNMO15061 1565 aa15.8■□□□□ 0.12
COL25A1-202ENST00000399127 PPLO60437 1756 aa15.8■□□□□ 0.12
COL25A1-202ENST00000399127 SLC52A1Q9NWF4 448 aa15.79■□□□□ 0.12
COL25A1-202ENST00000399127 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
COL25A1-202ENST00000399127 CLTCQ00610 1675 aaKnown RBP15.79■□□□□ 0.12
COL25A1-202ENST00000399127 SMG6Q86US8 1419 aaKnown RBP15.79■□□□□ 0.12
COL25A1-202ENST00000399127 NUDCQ9Y266 331 aa15.79■□□□□ 0.12
COL25A1-202ENST00000399127 PIK3C2GO75747 1445 aa15.79■□□□□ 0.12
COL25A1-202ENST00000399127 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
COL25A1-202ENST00000399127 MYOM1P52179 1685 aa15.78■□□□□ 0.12
COL25A1-202ENST00000399127 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
COL25A1-202ENST00000399127 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
COL25A1-202ENST00000399127 C14orf93Q9H972 538 aaKnown RBP15.77■□□□□ 0.12
COL25A1-202ENST00000399127 KDM5AP29375 1690 aaKnown RBP15.77■□□□□ 0.12
COL25A1-202ENST00000399127 CENPJQ9HC77 1338 aaPredicted RBP15.77■□□□□ 0.11
COL25A1-202ENST00000399127 PREX1Q8TCU6 1659 aa15.76■□□□□ 0.11
COL25A1-202ENST00000399127 RPGRIP1LQ68CZ1 1315 aa15.75■□□□□ 0.11
COL25A1-202ENST00000399127 ZMYM3Q14202 1370 aa15.75■□□□□ 0.11
COL25A1-202ENST00000399127 PIK3C2BO00750 1634 aa15.74■□□□□ 0.11
COL25A1-202ENST00000399127 PPP2R1AP30153 589 aa15.74■□□□□ 0.11
COL25A1-202ENST00000399127 ASXL1Q8IXJ9 1541 aa15.73■□□□□ 0.11
COL25A1-202ENST00000399127 ADGRB1O14514 1584 aa15.73■□□□□ 0.11
COL25A1-202ENST00000399127 SETBP1Q9Y6X0 1596 aa15.73■□□□□ 0.11
COL25A1-202ENST00000399127 VGFO15240 615 aaPredicted RBP15.72■□□□□ 0.11
COL25A1-202ENST00000399127 CARD14Q9BXL6 1004 aa15.72■□□□□ 0.11
COL25A1-202ENST00000399127 NEXMIFQ5QGS0 1516 aa15.72■□□□□ 0.11
COL25A1-202ENST00000399127 SAFB2Q14151 953 aaKnown RBP eCLIP15.71■□□□□ 0.11
COL25A1-202ENST00000399127 ADAMTS8Q9UP79 889 aa15.71■□□□□ 0.11
COL25A1-202ENST00000399127 B4GALNT3Q6L9W6 998 aa15.7■□□□□ 0.1
COL25A1-202ENST00000399127 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
COL25A1-202ENST00000399127 MYO5BQ9ULV0 1848 aa15.7■□□□□ 0.1
COL25A1-202ENST00000399127 MYO3AQ8NEV4 1616 aa15.7■□□□□ 0.1
COL25A1-202ENST00000399127 CEBPAP49715 358 aaPredicted RBP15.7■□□□□ 0.1
COL25A1-202ENST00000399127 SLC24A1O60721 1099 aa15.69■□□□□ 0.1
COL25A1-202ENST00000399127 CDCA7LQ96GN5 454 aa15.69■□□□□ 0.1
COL25A1-202ENST00000399127 STK26Q9P289 416 aa15.69■□□□□ 0.1
COL25A1-202ENST00000399127 QRICH2Q9H0J4 1663 aa15.69■□□□□ 0.1
COL25A1-202ENST00000399127 SBNO2Q9Y2G9 1366 aa15.69■□□□□ 0.1
COL25A1-202ENST00000399127 SLC12A5Q9H2X9 1139 aa15.68■□□□□ 0.1
COL25A1-202ENST00000399127 ERICH6BQ5W0A0 696 aa15.67■□□□□ 0.1
COL25A1-202ENST00000399127 WDR43Q15061 677 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL25A1-202ENST00000399127 BLMP54132 1417 aaPredicted RBP15.67■□□□□ 0.1
COL25A1-202ENST00000399127 TMEM131LA2VDJ0 1609 aa15.66■□□□□ 0.1
COL25A1-202ENST00000399127 SPATA31D1Q6ZQQ2 1576 aa15.66■□□□□ 0.1
COL25A1-202ENST00000399127 TNRQ92752 1358 aa15.64■□□□□ 0.09
COL25A1-202ENST00000399127 TNNT2P45379 298 aaPredicted RBP15.64■□□□□ 0.09
COL25A1-202ENST00000399127 RNF123Q5XPI4 1314 aa15.64■□□□□ 0.09
COL25A1-202ENST00000399127 NPC1L1Q9UHC9 1359 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms