RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 RBM10P98175 930 aaKnown RBP10.56□□□□□ -0.72
CTNND1-205ENST00000399050 MLECQ14165 292 aa10.56□□□□□ -0.72
CTNND1-205ENST00000399050 INTS3Q68E01 1043 aaKnown RBP10.56□□□□□ -0.72
CTNND1-205ENST00000399050 LNPKQ9C0E8 428 aa10.56□□□□□ -0.72
CTNND1-205ENST00000399050 CDCA7LQ96GN5 454 aa10.55□□□□□ -0.72
CTNND1-205ENST00000399050 KIF3BO15066 747 aa10.55□□□□□ -0.72
CTNND1-205ENST00000399050 CCDC173Q0VFZ6 552 aa10.55□□□□□ -0.72
CTNND1-205ENST00000399050 EFCAB2Q5VUJ9 269 aa10.55□□□□□ -0.72
CTNND1-205ENST00000399050 RASSF8Q8NHQ8 419 aa10.55□□□□□ -0.72
CTNND1-205ENST00000399050 IFT57Q9NWB7 429 aa10.55□□□□□ -0.72
CTNND1-205ENST00000399050 NGEFQ8N5V2 710 aa10.54□□□□□ -0.72
CTNND1-205ENST00000399050 ANO2Q9NQ90 1003 aa10.54□□□□□ -0.72
CTNND1-205ENST00000399050 TPD52L1Q16890 204 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-205ENST00000399050 RUNDC1Q96C34 613 aa10.54□□□□□ -0.72
CTNND1-205ENST00000399050 HOMER1Q86YM7 354 aa10.54□□□□□ -0.72
CTNND1-205ENST00000399050 DIAPH3Q9NSV4 1193 aa10.54□□□□□ -0.72
CTNND1-205ENST00000399050 BCL11BQ9C0K0 894 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-205ENST00000399050 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-205ENST00000399050 CAVIN1Q6NZI2 390 aaKnown RBP10.53□□□□□ -0.72
CTNND1-205ENST00000399050 FGD6Q6ZV73 1430 aa10.53□□□□□ -0.72
CTNND1-205ENST00000399050 AAMPQ13685 434 aa10.53□□□□□ -0.72
CTNND1-205ENST00000399050 PES1O00541 588 aaKnown RBP10.53□□□□□ -0.72
CTNND1-205ENST00000399050 RSPH4AQ5TD94 716 aa10.53□□□□□ -0.72
CTNND1-205ENST00000399050 ZNF330Q9Y3S2 320 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-205ENST00000399050 SMARCA4P51532 1647 aa10.53□□□□□ -0.72
CTNND1-205ENST00000399050 RNF214Q8ND24 703 aa10.53□□□□□ -0.72
CTNND1-205ENST00000399050 BICD2Q8TD16 824 aa10.53□□□□□ -0.72
CTNND1-205ENST00000399050 TAF7LQ5H9L4 462 aa10.52□□□□□ -0.72
CTNND1-205ENST00000399050 SASS6Q6UVJ0 657 aa10.52□□□□□ -0.72
CTNND1-205ENST00000399050 SMG6Q86US8 1419 aaKnown RBP10.52□□□□□ -0.72
CTNND1-205ENST00000399050 CUX1P39880 1505 aa10.52□□□□□ -0.72
CTNND1-205ENST00000399050 LRRC9Q6ZRR7 1453 aa10.52□□□□□ -0.73
CTNND1-205ENST00000399050 RIPK4P57078 832 aa10.52□□□□□ -0.73
CTNND1-205ENST00000399050 SMC3Q9UQE7 1217 aa10.52□□□□□ -0.73
CTNND1-205ENST00000399050 TSR1Q2NL82 804 aaKnown RBP10.52□□□□□ -0.73
CTNND1-205ENST00000399050 RUFY2Q8WXA3 655 aa10.52□□□□□ -0.73
CTNND1-205ENST00000399050 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
CTNND1-205ENST00000399050 CDC45O75419 566 aa10.51□□□□□ -0.73
CTNND1-205ENST00000399050 ROCK1Q13464 1354 aa10.51□□□□□ -0.73
CTNND1-205ENST00000399050 VPS37CA5D8V6 355 aaPredicted RBP10.51□□□□□ -0.73
CTNND1-205ENST00000399050 TPM1P09493 284 aa10.51□□□□□ -0.73
CTNND1-205ENST00000399050 CCDC70Q6NSX1 233 aa10.51□□□□□ -0.73
CTNND1-205ENST00000399050 API5Q9BZZ5 524 aaKnown RBP10.51□□□□□ -0.73
CTNND1-205ENST00000399050 CCDC9Q9Y3X0 531 aaKnown RBP10.51□□□□□ -0.73
CTNND1-205ENST00000399050 GRPEL1Q9HAV7 217 aa10.5□□□□□ -0.73
CTNND1-205ENST00000399050 PDZRN3Q9UPQ7 1066 aa10.5□□□□□ -0.73
CTNND1-205ENST00000399050 FBXW7Q969H0 707 aa10.5□□□□□ -0.73
CTNND1-205ENST00000399050 ZKSCAN1P17029 563 aaPredicted RBP10.5□□□□□ -0.73
CTNND1-205ENST00000399050 AMPHP49418 695 aa10.5□□□□□ -0.73
CTNND1-205ENST00000399050 TSPY26PQ9H489 355 aa10.5□□□□□ -0.73
CTNND1-205ENST00000399050 PDE4CQ08493 712 aa10.5□□□□□ -0.73
CTNND1-205ENST00000399050 ARGLU1Q9NWB6 273 aaPredicted RBP10.5□□□□□ -0.73
CTNND1-205ENST00000399050 CHMP4CQ96CF2 233 aa10.5□□□□□ -0.73
CTNND1-205ENST00000399050 EVC2Q86UK5 1308 aa10.5□□□□□ -0.73
CTNND1-205ENST00000399050 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
CTNND1-205ENST00000399050 TOMM22Q9NS69 142 aa10.49□□□□□ -0.73
CTNND1-205ENST00000399050 RRBP1Q9P2E9 1410 aaKnown RBP10.49□□□□□ -0.73
CTNND1-205ENST00000399050 PRPF40AO75400 957 aaKnown RBP10.49□□□□□ -0.73
CTNND1-205ENST00000399050 WDR97A6NE52 1622 aa10.49□□□□□ -0.73
CTNND1-205ENST00000399050 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
CTNND1-205ENST00000399050 MYOM3Q5VTT5 1437 aa10.48□□□□□ -0.73
CTNND1-205ENST00000399050 DIAPH1O60610 1272 aaKnown RBP10.48□□□□□ -0.73
CTNND1-205ENST00000399050 RRP9O43818 475 aaKnown RBP10.48□□□□□ -0.73
CTNND1-205ENST00000399050 NOM1Q5C9Z4 860 aaKnown RBP10.48□□□□□ -0.73
CTNND1-205ENST00000399050 LTV1Q96GA3 475 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-205ENST00000399050 CSB-PGBD3P0DP91 1061 aa10.48□□□□□ -0.73
CTNND1-205ENST00000399050 LETM1O95202 739 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-205ENST00000399050 NCBP3Q53F19 620 aaKnown RBP10.47□□□□□ -0.73
CTNND1-205ENST00000399050 UQCRHLA0A096LP55 91 aa10.47□□□□□ -0.73
CTNND1-205ENST00000399050 UQCRHP07919 91 aa10.47□□□□□ -0.73
CTNND1-205ENST00000399050 COG3Q96JB2 828 aa10.46□□□□□ -0.73
CTNND1-205ENST00000399050 MBD3O95983 291 aa10.46□□□□□ -0.73
CTNND1-205ENST00000399050 CCDC184Q52MB2 194 aa10.46□□□□□ -0.73
CTNND1-205ENST00000399050 CCDC66A2RUB6 948 aa10.46□□□□□ -0.74
CTNND1-205ENST00000399050 FOSBP53539 338 aa10.46□□□□□ -0.74
CTNND1-205ENST00000399050 IFIT2P09913 472 aaKnown RBP10.46□□□□□ -0.74
CTNND1-205ENST00000399050 WASHC2CQ9Y4E1 1318 aa10.46□□□□□ -0.74
CTNND1-205ENST00000399050 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.45□□□□□ -0.74
CTNND1-205ENST00000399050 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
CTNND1-205ENST00000399050 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
CTNND1-205ENST00000399050 PATL2C9JE40 543 aaKnown RBP10.45□□□□□ -0.74
CTNND1-205ENST00000399050 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
CTNND1-205ENST00000399050 CCDC27Q2M243 656 aa10.45□□□□□ -0.74
CTNND1-205ENST00000399050 RNF20Q5VTR2 975 aa10.45□□□□□ -0.74
CTNND1-205ENST00000399050 BCAR3O75815 825 aa10.45□□□□□ -0.74
CTNND1-205ENST00000399050 NGDNQ8NEJ9 315 aaKnown RBP10.45□□□□□ -0.74
CTNND1-205ENST00000399050 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-205ENST00000399050 TRIM29Q14134 588 aa10.44□□□□□ -0.74
CTNND1-205ENST00000399050 CCDC73Q6ZRK6 1079 aa10.44□□□□□ -0.74
CTNND1-205ENST00000399050 PPP2R1AP30153 589 aa10.44□□□□□ -0.74
CTNND1-205ENST00000399050 PDE3AQ14432 1141 aa10.44□□□□□ -0.74
CTNND1-205ENST00000399050 ESPNB1AK53 854 aa10.44□□□□□ -0.74
CTNND1-205ENST00000399050 HOOK1Q9UJC3 728 aaKnown RBP10.44□□□□□ -0.74
CTNND1-205ENST00000399050 AKAP17AQ02040 695 aaKnown RBP10.43□□□□□ -0.74
CTNND1-205ENST00000399050 RABEP1Q15276 862 aa10.43□□□□□ -0.74
CTNND1-205ENST00000399050 PCMTD1Q96MG8 357 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-205ENST00000399050 TRIM5Q9C035 493 aa10.43□□□□□ -0.74
CTNND1-205ENST00000399050 MCM4P33991 863 aa10.43□□□□□ -0.74
CTNND1-205ENST00000399050 PNISRQ8TF01 805 aaKnown RBP10.43□□□□□ -0.74
CTNND1-205ENST00000399050 ACBD3Q9H3P7 528 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms