RNA–Protein interactions for RNA: ENST00000398532.8

MSL1-202, Transcript of male specific lethal 1 homolog, humanhuman

TSL 1 (best) BASIC

Gene MSL1, Length 4,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-202ENST00000398532 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
MSL1-202ENST00000398532 DZIP1LQ8IYY4 767 aaKnown RBP22.79■■□□□ 1.24
MSL1-202ENST00000398532 C11orf95C9JLR9 678 aaPredicted RBP22.79■■□□□ 1.24
MSL1-202ENST00000398532 CSB-PGBD3P0DP91 1061 aa22.78■■□□□ 1.24
MSL1-202ENST00000398532 PANK1Q8TE04 598 aa22.78■■□□□ 1.24
MSL1-202ENST00000398532 MTHFSP49914 203 aa22.77■■□□□ 1.24
MSL1-202ENST00000398532 CABP2Q9NPB3 220 aa22.77■■□□□ 1.24
MSL1-202ENST00000398532 SNAPC4Q5SXM2 1469 aa22.77■■□□□ 1.23
MSL1-202ENST00000398532 HECW1Q76N89 1606 aa22.76■■□□□ 1.23
MSL1-202ENST00000398532 SUPT6HQ7KZ85 1726 aaKnown RBP22.76■■□□□ 1.23
MSL1-202ENST00000398532 DDX19BQ9UMR2 479 aa22.76■■□□□ 1.23
MSL1-202ENST00000398532 MSNP26038 577 aaKnown RBP22.75■■□□□ 1.23
MSL1-202ENST00000398532 CHMP4AQ9BY43 222 aa22.75■■□□□ 1.23
MSL1-202ENST00000398532 GOLGA6L3A6NEY3 463 aa22.74■■□□□ 1.23
MSL1-202ENST00000398532 TCP11L2Q8N4U5 519 aa22.74■■□□□ 1.23
MSL1-202ENST00000398532 NOL8Q76FK4 1167 aaKnown RBP22.73■■□□□ 1.23
MSL1-202ENST00000398532 ZNF330Q9Y3S2 320 aaPredicted RBP22.72■■□□□ 1.23
MSL1-202ENST00000398532 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
MSL1-202ENST00000398532 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
MSL1-202ENST00000398532 KIAA0586Q9BVV6 1533 aa22.7■■□□□ 1.23
MSL1-202ENST00000398532 PTMSP20962 102 aa22.7■■□□□ 1.23
MSL1-202ENST00000398532 ROCK1Q13464 1354 aa22.7■■□□□ 1.22
MSL1-202ENST00000398532 ANKRD30BQ9BXX2 1392 aa22.7■■□□□ 1.22
MSL1-202ENST00000398532 SLC12A5Q9H2X9 1139 aa22.7■■□□□ 1.22
MSL1-202ENST00000398532 HMOX1P09601 288 aa22.7■■□□□ 1.22
MSL1-202ENST00000398532 GSE1Q14687 1217 aa22.67■■□□□ 1.22
MSL1-202ENST00000398532 NPHP1O15259 732 aa22.66■■□□□ 1.22
MSL1-202ENST00000398532 ST18O60284 1047 aa22.66■■□□□ 1.22
MSL1-202ENST00000398532 LNPKQ9C0E8 428 aa22.65■■□□□ 1.22
MSL1-202ENST00000398532 FAM69CQ0P6D2 419 aa22.65■■□□□ 1.22
MSL1-202ENST00000398532 HDAC5Q9UQL6 1122 aa22.64■■□□□ 1.21
MSL1-202ENST00000398532 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.21
MSL1-202ENST00000398532 ABCC5O15440 1437 aa22.63■■□□□ 1.21
MSL1-202ENST00000398532 IQGAP2Q13576 1575 aa22.63■■□□□ 1.21
MSL1-202ENST00000398532 FOXD4L5Q5VV16 416 aaPredicted RBP22.63■■□□□ 1.21
MSL1-202ENST00000398532 FOXD4L4Q8WXT5 416 aaPredicted RBP22.63■■□□□ 1.21
MSL1-202ENST00000398532 API5Q9BZZ5 524 aaKnown RBP22.63■■□□□ 1.21
MSL1-202ENST00000398532 RILPL2Q969X0 211 aa22.62■■□□□ 1.21
MSL1-202ENST00000398532 CHMP3Q9Y3E7 222 aa22.62■■□□□ 1.21
MSL1-202ENST00000398532 KIF16BQ96L93 1317 aa22.62■■□□□ 1.21
MSL1-202ENST00000398532 BCAR3O75815 825 aa22.61■■□□□ 1.21
MSL1-202ENST00000398532 SMG6Q86US8 1419 aaKnown RBP22.61■■□□□ 1.21
MSL1-202ENST00000398532 GPATCH3Q96I76 525 aa22.61■■□□□ 1.21
MSL1-202ENST00000398532 NECTIN2Q92692 538 aa22.6■■□□□ 1.21
MSL1-202ENST00000398532 PLB1Q6P1J6 1458 aa22.6■■□□□ 1.21
MSL1-202ENST00000398532 PTPN23Q9H3S7 1636 aa22.59■■□□□ 1.21
MSL1-202ENST00000398532 ERBINQ96RT1 1412 aa22.59■■□□□ 1.21
MSL1-202ENST00000398532 GNAI1P63096 354 aa22.59■■□□□ 1.21
MSL1-202ENST00000398532 DRC7Q8IY82 874 aa22.59■■□□□ 1.21
MSL1-202ENST00000398532 ARHGEF11O15085 1522 aa22.58■■□□□ 1.2
MSL1-202ENST00000398532 DDX11L8A8MPP1 907 aa22.58■■□□□ 1.2
MSL1-202ENST00000398532 SYAP1Q96A49 352 aaPredicted RBP22.57■■□□□ 1.2
MSL1-202ENST00000398532 PLEKHH2Q8IVE3 1493 aa22.57■■□□□ 1.2
MSL1-202ENST00000398532 TEFQ10587 303 aa22.57■■□□□ 1.2
MSL1-202ENST00000398532 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.57■■□□□ 1.2
MSL1-202ENST00000398532 GOLGA6L6A8MZA4 724 aa22.56■■□□□ 1.2
MSL1-202ENST00000398532 BIVM-ERCC5R4GMW8 1640 aa22.56■■□□□ 1.2
MSL1-202ENST00000398532 NRDCO43847 1150 aa22.56■■□□□ 1.2
MSL1-202ENST00000398532 EIF2S2P20042 333 aaKnown RBP22.56■■□□□ 1.2
MSL1-202ENST00000398532 EXOSC9Q06265 439 aaKnown RBP22.55■■□□□ 1.2
MSL1-202ENST00000398532 CDK11BP21127 795 aaKnown RBP22.55■■□□□ 1.2
MSL1-202ENST00000398532 DDX49Q9Y6V7 483 aaKnown RBP22.55■■□□□ 1.2
MSL1-202ENST00000398532 CUL7Q14999 1698 aa22.55■■□□□ 1.2
MSL1-202ENST00000398532 GORABQ5T7V8 394 aa22.55■■□□□ 1.2
MSL1-202ENST00000398532 AAMPQ13685 434 aa22.55■■□□□ 1.2
MSL1-202ENST00000398532 PRAM1Q96QH2 718 aa22.54■■□□□ 1.2
MSL1-202ENST00000398532 NCOA1Q15788 1441 aa22.54■■□□□ 1.2
MSL1-202ENST00000398532 CHAF1AQ13111 956 aaPredicted RBP22.53■■□□□ 1.2
MSL1-202ENST00000398532 PDE3AQ14432 1141 aa22.53■■□□□ 1.2
MSL1-202ENST00000398532 NFKBIBQ15653 356 aa22.53■■□□□ 1.2
MSL1-202ENST00000398532 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.53■■□□□ 1.2
MSL1-202ENST00000398532 TSR2Q969E8 191 aaKnown RBP22.53■■□□□ 1.2
MSL1-202ENST00000398532 C22orf23Q9BZE7 217 aa22.53■■□□□ 1.2
MSL1-202ENST00000398532 CAMSAP2Q08AD1 1489 aa22.53■■□□□ 1.2
MSL1-202ENST00000398532 FKBP5Q13451 457 aaPredicted RBP22.52■■□□□ 1.2
MSL1-202ENST00000398532 PRKAR2BP31323 418 aa22.52■■□□□ 1.2
MSL1-202ENST00000398532 LAMC3Q9Y6N6 1575 aa22.52■■□□□ 1.2
MSL1-202ENST00000398532 FOXD4L6Q3SYB3 417 aaPredicted RBP22.51■■□□□ 1.19
MSL1-202ENST00000398532 FOXD4L3Q6VB84 417 aaPredicted RBP22.51■■□□□ 1.19
MSL1-202ENST00000398532 BACH2Q9BYV9 841 aa22.51■■□□□ 1.19
MSL1-202ENST00000398532 MAGI1Q96QZ7 1491 aaPredicted RBP22.51■■□□□ 1.19
MSL1-202ENST00000398532 CHMP5Q9NZZ3 219 aa22.51■■□□□ 1.19
MSL1-202ENST00000398532 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
MSL1-202ENST00000398532 KIAA2012Q0VF49 1180 aa22.5■■□□□ 1.19
MSL1-202ENST00000398532 GNL2Q13823 731 aaKnown RBP22.5■■□□□ 1.19
MSL1-202ENST00000398532 REC8O95072 547 aa22.49■■□□□ 1.19
MSL1-202ENST00000398532 C1orf141Q5JVX7 400 aa22.49■■□□□ 1.19
MSL1-202ENST00000398532 TSPYL4Q9UJ04 414 aa22.49■■□□□ 1.19
MSL1-202ENST00000398532 PDZRN3Q9UPQ7 1066 aa22.49■■□□□ 1.19
MSL1-202ENST00000398532 RAPGEF3O95398 923 aa22.48■■□□□ 1.19
MSL1-202ENST00000398532 TAF7LQ5H9L4 462 aa22.48■■□□□ 1.19
MSL1-202ENST00000398532 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
MSL1-202ENST00000398532 RPRD2Q5VT52 1461 aaKnown RBP22.47■■□□□ 1.19
MSL1-202ENST00000398532 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
MSL1-202ENST00000398532 HSP90B1P14625 803 aaKnown RBP22.47■■□□□ 1.19
MSL1-202ENST00000398532 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
MSL1-202ENST00000398532 CABP1Q9NZU7 370 aa22.45■■□□□ 1.18
MSL1-202ENST00000398532 HTATSF1O43719 755 aaKnown RBP22.45■■□□□ 1.18
MSL1-202ENST00000398532 C9orf78Q9NZ63 289 aaPredicted RBP22.45■■□□□ 1.18
MSL1-202ENST00000398532 MAPKBP1O60336 1514 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms