RNA–Protein interactions for RNA: ENST00000398455.3

HIGD1C-201, Transcript of HIG1 hypoxia inducible domain family member 1C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1C, Length 371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1C-201ENST00000398455 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.03
HIGD1C-201ENST00000398455 FAM198AQ9UFP1 575 aa8.59□□□□□ -1.03
HIGD1C-201ENST00000398455 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
HIGD1C-201ENST00000398455 KDM2AQ9Y2K7 1162 aa8.57□□□□□ -1.04
HIGD1C-201ENST00000398455 DDX12PQ92771 950 aa8.56□□□□□ -1.04
HIGD1C-201ENST00000398455 PNMA3Q9UL41 463 aa8.56□□□□□ -1.04
HIGD1C-201ENST00000398455 FAM181BA6NEQ2 426 aa8.55□□□□□ -1.04
HIGD1C-201ENST00000398455 TERTO14746 1132 aaKnown RBP8.55□□□□□ -1.04
HIGD1C-201ENST00000398455 FOXC1Q12948 553 aa8.55□□□□□ -1.04
HIGD1C-201ENST00000398455 CRIPAKQ8N1N5 446 aa8.55□□□□□ -1.04
HIGD1C-201ENST00000398455 TATDN2Q93075 761 aa8.55□□□□□ -1.04
HIGD1C-201ENST00000398455 CDCA7LQ96GN5 454 aa8.55□□□□□ -1.04
HIGD1C-201ENST00000398455 AXIN1O15169 862 aa8.54□□□□□ -1.04
HIGD1C-201ENST00000398455 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
HIGD1C-201ENST00000398455 ANKLE1Q8NAG6 615 aa8.54□□□□□ -1.04
HIGD1C-201ENST00000398455 TLL1O43897 1013 aa8.53□□□□□ -1.04
HIGD1C-201ENST00000398455 MAP3K7O43318 606 aa8.51□□□□□ -1.05
HIGD1C-201ENST00000398455 S1PR4O95977 384 aa8.51□□□□□ -1.05
HIGD1C-201ENST00000398455 SNRPBP14678 240 aaKnown RBP8.51□□□□□ -1.05
HIGD1C-201ENST00000398455 PRSS12P56730 875 aa8.51□□□□□ -1.05
HIGD1C-201ENST00000398455 MFSD10Q14728 455 aa8.51□□□□□ -1.05
HIGD1C-201ENST00000398455 PKD2L1Q9P0L9 805 aa8.51□□□□□ -1.05
HIGD1C-201ENST00000398455 BLOC1S3Q6QNY0 202 aa8.5□□□□□ -1.05
HIGD1C-201ENST00000398455 AVPP01185 164 aa8.49□□□□□ -1.05
HIGD1C-201ENST00000398455 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
HIGD1C-201ENST00000398455 PLA2G2CQ5R387 149 aa8.49□□□□□ -1.05
HIGD1C-201ENST00000398455 NUDT18Q6ZVK8 323 aa8.49□□□□□ -1.05
HIGD1C-201ENST00000398455 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
HIGD1C-201ENST00000398455 EN1Q05925 392 aaPredicted RBP8.48□□□□□ -1.05
HIGD1C-201ENST00000398455 CADPS2Q86UW7 1296 aa8.48□□□□□ -1.05
HIGD1C-201ENST00000398455 PCDHB3Q9Y5E6 796 aa8.48□□□□□ -1.05
HIGD1C-201ENST00000398455 NBR1Q14596 966 aa8.47□□□□□ -1.05
HIGD1C-201ENST00000398455 SWT1Q5T5J6 900 aaKnown RBP8.47□□□□□ -1.05
HIGD1C-201ENST00000398455 ZSCAN1Q8NBB4 408 aa8.47□□□□□ -1.05
HIGD1C-201ENST00000398455 DPYSL4O14531 572 aa8.46□□□□□ -1.06
HIGD1C-201ENST00000398455 GMPRP36959 345 aa8.43□□□□□ -1.06
HIGD1C-201ENST00000398455 CTC1Q2NKJ3 1217 aa8.43□□□□□ -1.06
HIGD1C-201ENST00000398455 TOR4AQ9NXH8 423 aa8.43□□□□□ -1.06
HIGD1C-201ENST00000398455 KCTD17Q8N5Z5 321 aa8.42□□□□□ -1.06
HIGD1C-201ENST00000398455 NECTIN2Q92692 538 aa8.42□□□□□ -1.06
HIGD1C-201ENST00000398455 SLF2Q8IX21 1173 aa8.41□□□□□ -1.06
HIGD1C-201ENST00000398455 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
HIGD1C-201ENST00000398455 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
HIGD1C-201ENST00000398455 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.06
HIGD1C-201ENST00000398455 WDR70Q9NW82 654 aa8.39□□□□□ -1.07
HIGD1C-201ENST00000398455 LMOD2Q6P5Q4 547 aa8.38□□□□□ -1.07
HIGD1C-201ENST00000398455 TRIM47Q96LD4 638 aa8.37□□□□□ -1.07
HIGD1C-201ENST00000398455 PRIM1P49642 420 aaKnown RBP8.36□□□□□ -1.07
HIGD1C-201ENST00000398455 SLC16A10Q8TF71 515 aa8.36□□□□□ -1.07
HIGD1C-201ENST00000398455 CERKQ8TCT0 537 aa8.34□□□□□ -1.07
HIGD1C-201ENST00000398455 PRR14Q9BWN1 585 aa8.34□□□□□ -1.07
HIGD1C-201ENST00000398455 SLC6A16Q9GZN6 736 aa8.34□□□□□ -1.07
HIGD1C-201ENST00000398455 ADH1BP00325 375 aa8.33□□□□□ -1.08
HIGD1C-201ENST00000398455 VEGFBP49765 207 aa8.32□□□□□ -1.08
HIGD1C-201ENST00000398455 BCANQ96GW7 911 aa8.32□□□□□ -1.08
HIGD1C-201ENST00000398455 SENP2Q9HC62 589 aa8.32□□□□□ -1.08
HIGD1C-201ENST00000398455 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
HIGD1C-201ENST00000398455 CAMK2BQ13554 666 aa8.31□□□□□ -1.08
HIGD1C-201ENST00000398455 CDHR5Q9HBB8 845 aa8.31□□□□□ -1.08
HIGD1C-201ENST00000398455 SLC4A3P48751 1232 aa8.3□□□□□ -1.08
HIGD1C-201ENST00000398455 NXF1Q9UBU9 619 aaKnown RBP8.29□□□□□ -1.08
HIGD1C-201ENST00000398455 E2F4Q16254 413 aa8.28□□□□□ -1.08
HIGD1C-201ENST00000398455 P3H3Q8IVL6 736 aa8.28□□□□□ -1.08
HIGD1C-201ENST00000398455 KCNV2Q8TDN2 545 aa8.28□□□□□ -1.08
HIGD1C-201ENST00000398455 IRF7Q92985 503 aa8.28□□□□□ -1.08
HIGD1C-201ENST00000398455 SMPD1P17405 629 aa8.27□□□□□ -1.09
HIGD1C-201ENST00000398455 GSK3AP49840 483 aa8.27□□□□□ -1.09
HIGD1C-201ENST00000398455 XP32Q5T750 250 aa8.27□□□□□ -1.09
HIGD1C-201ENST00000398455 CD2BP2O95400 341 aaKnown RBP8.25□□□□□ -1.09
HIGD1C-201ENST00000398455 RPIAP49247 311 aa8.25□□□□□ -1.09
HIGD1C-201ENST00000398455 KCNMA1Q12791 1236 aa8.25□□□□□ -1.09
HIGD1C-201ENST00000398455 ERBB4Q15303 1308 aa8.25□□□□□ -1.09
HIGD1C-201ENST00000398455 ACTN4O43707 911 aaKnown RBP8.24□□□□□ -1.09
HIGD1C-201ENST00000398455 PADI6Q6TGC4 694 aa8.24□□□□□ -1.09
HIGD1C-201ENST00000398455 KIFC2Q96AC6 838 aa8.24□□□□□ -1.09
HIGD1C-201ENST00000398455 GRXCR2A6NFK2 248 aa8.23□□□□□ -1.09
HIGD1C-201ENST00000398455 EYA1Q99502 592 aa8.22□□□□□ -1.09
HIGD1C-201ENST00000398455 RBM27Q9P2N5 1060 aaKnown RBP8.22□□□□□ -1.09
HIGD1C-201ENST00000398455 J3QL48 77 aa8.21□□□□□ -1.1
HIGD1C-201ENST00000398455 KMT5BQ4FZB7 885 aa8.21□□□□□ -1.1
HIGD1C-201ENST00000398455 TTC13Q8NBP0 860 aa8.21□□□□□ -1.1
HIGD1C-201ENST00000398455 ARHGEF1Q92888 912 aaKnown RBP8.21□□□□□ -1.1
HIGD1C-201ENST00000398455 NR1I2O75469 434 aa8.2□□□□□ -1.1
HIGD1C-201ENST00000398455 TMEM151AQ8N4L1 468 aa8.2□□□□□ -1.1
HIGD1C-201ENST00000398455 HPS1Q92902 700 aa8.2□□□□□ -1.1
HIGD1C-201ENST00000398455 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
HIGD1C-201ENST00000398455 CFHP08603 1231 aa8.19□□□□□ -1.1
HIGD1C-201ENST00000398455 PRKCSHP14314 528 aaPredicted RBP8.19□□□□□ -1.1
HIGD1C-201ENST00000398455 PDIA6Q15084 440 aa8.19□□□□□ -1.1
HIGD1C-201ENST00000398455 SCUBE3Q8IX30 993 aa8.19□□□□□ -1.1
HIGD1C-201ENST00000398455 FCF1Q9Y324 198 aaKnown RBP8.19□□□□□ -1.1
HIGD1C-201ENST00000398455 H3BM21 787 aa8.18□□□□□ -1.1
HIGD1C-201ENST00000398455 GDF11O95390 407 aa8.18□□□□□ -1.1
HIGD1C-201ENST00000398455 SNIP1Q8TAD8 396 aaKnown RBP8.18□□□□□ -1.1
HIGD1C-201ENST00000398455 SPSB2Q99619 263 aa8.18□□□□□ -1.1
HIGD1C-201ENST00000398455 RASSF7Q02833 373 aa8.15□□□□□ -1.1
HIGD1C-201ENST00000398455 PUS10Q3MIT2 529 aaKnown RBP8.15□□□□□ -1.1
HIGD1C-201ENST00000398455 NPAS3Q8IXF0 933 aa8.15□□□□□ -1.1
HIGD1C-201ENST00000398455 ARIH1Q9Y4X5 557 aaPredicted RBP8.15□□□□□ -1.1
HIGD1C-201ENST00000398455 NPDC1Q9NQX5 325 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms