RNA–Protein interactions for RNA: ENST00000398249.8

GSK3A-202, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSK3A, Length 3,524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-202ENST00000398249 C8orf34Q49A92 452 aa12.08□□□□□ -0.48
GSK3A-202ENST00000398249 SAMD9LQ8IVG5 1584 aa12.08□□□□□ -0.48
GSK3A-202ENST00000398249 NLRP13Q86W25 1043 aa12.07□□□□□ -0.48
GSK3A-202ENST00000398249 C9orf84Q5VXU9 1444 aa12.07□□□□□ -0.48
GSK3A-202ENST00000398249 ANKRD50Q9ULJ7 1429 aa12.07□□□□□ -0.48
GSK3A-202ENST00000398249 GTF2E1P29083 439 aaPredicted RBP12.06□□□□□ -0.48
GSK3A-202ENST00000398249 INSRP06213 1382 aa12.05□□□□□ -0.48
GSK3A-202ENST00000398249 LAMC1P11047 1609 aa12.05□□□□□ -0.48
GSK3A-202ENST00000398249 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
GSK3A-202ENST00000398249 DCAF11Q8TEB1 546 aa12.05□□□□□ -0.48
GSK3A-202ENST00000398249 IPO4Q8TEX9 1081 aaKnown RBP12.05□□□□□ -0.48
GSK3A-202ENST00000398249 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
GSK3A-202ENST00000398249 CCDC141Q6ZP82 1450 aa12.04□□□□□ -0.48
GSK3A-202ENST00000398249 COL17A1Q9UMD9 1497 aaPredicted RBP12.04□□□□□ -0.48
GSK3A-202ENST00000398249 PRDM15P57071 1507 aaPredicted RBP12.04□□□□□ -0.48
GSK3A-202ENST00000398249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.04□□□□□ -0.48
GSK3A-202ENST00000398249 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
GSK3A-202ENST00000398249 TTC37Q6PGP7 1564 aa12.04□□□□□ -0.48
GSK3A-202ENST00000398249 PRAG1Q86YV5 1406 aa12.04□□□□□ -0.48
GSK3A-202ENST00000398249 DISP3Q9P2K9 1392 aa12.03□□□□□ -0.48
GSK3A-202ENST00000398249 PLEKHH2Q8IVE3 1493 aa12.03□□□□□ -0.48
GSK3A-202ENST00000398249 PLXNC1O60486 1568 aa12.03□□□□□ -0.48
GSK3A-202ENST00000398249 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.48
GSK3A-202ENST00000398249 SECISBP2LQ93073 1101 aaKnown RBP12.02□□□□□ -0.48
GSK3A-202ENST00000398249 ZCCHC11Q5TAX3 1644 aaKnown RBP12.02□□□□□ -0.48
GSK3A-202ENST00000398249 NUP155O75694 1391 aa12.02□□□□□ -0.49
GSK3A-202ENST00000398249 VGLL3A8MV65 326 aa12.02□□□□□ -0.49
GSK3A-202ENST00000398249 PLEKHH1Q9ULM0 1364 aa12.02□□□□□ -0.49
GSK3A-202ENST00000398249 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
GSK3A-202ENST00000398249 NBPF1Q3BBV0 1214 aa12.01□□□□□ -0.49
GSK3A-202ENST00000398249 TESK2Q96S53 571 aa12□□□□□ -0.49
GSK3A-202ENST00000398249 UNC13BO14795 1591 aa12□□□□□ -0.49
GSK3A-202ENST00000398249 USP19O94966 1318 aa12□□□□□ -0.49
GSK3A-202ENST00000398249 CC2D1BQ5T0F9 858 aaKnown RBP11.99□□□□□ -0.49
GSK3A-202ENST00000398249 STAC3Q96MF2 364 aa11.99□□□□□ -0.49
GSK3A-202ENST00000398249 ZNF521Q96K83 1311 aa11.99□□□□□ -0.49
GSK3A-202ENST00000398249 GPRASP1Q5JY77 1395 aa11.99□□□□□ -0.49
GSK3A-202ENST00000398249 DUSP27Q5VZP5 1158 aa11.99□□□□□ -0.49
GSK3A-202ENST00000398249 FAM135AQ9P2D6 1515 aa11.99□□□□□ -0.49
GSK3A-202ENST00000398249 FAM43AQ8N2R8 423 aa11.99□□□□□ -0.49
GSK3A-202ENST00000398249 PLA2R1Q13018 1463 aa11.98□□□□□ -0.49
GSK3A-202ENST00000398249 CDK11BP21127 795 aaKnown RBP11.98□□□□□ -0.49
GSK3A-202ENST00000398249 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
GSK3A-202ENST00000398249 ZNF777Q9ULD5 760 aaPredicted RBP11.98□□□□□ -0.49
GSK3A-202ENST00000398249 RNF17Q9BXT8 1623 aaKnown RBP11.98□□□□□ -0.49
GSK3A-202ENST00000398249 A2MP01023 1474 aa11.98□□□□□ -0.49
GSK3A-202ENST00000398249 PRDM10Q9NQV6 1147 aa11.98□□□□□ -0.49
GSK3A-202ENST00000398249 CENPQQ7L2Z9 268 aaPredicted RBP11.98□□□□□ -0.49
GSK3A-202ENST00000398249 TSPY4P0CV99 314 aa11.97□□□□□ -0.49
GSK3A-202ENST00000398249 TSPY10P0CW01 314 aa11.97□□□□□ -0.49
GSK3A-202ENST00000398249 ADAMTS8Q9UP79 889 aa11.97□□□□□ -0.49
GSK3A-202ENST00000398249 SYCP2Q9BX26 1530 aa11.97□□□□□ -0.49
GSK3A-202ENST00000398249 ARHGAP5Q13017 1502 aa11.97□□□□□ -0.49
GSK3A-202ENST00000398249 NLRP1Q9C000 1473 aa11.97□□□□□ -0.49
GSK3A-202ENST00000398249 MAGI2Q86UL8 1455 aa11.97□□□□□ -0.49
GSK3A-202ENST00000398249 CNPY4Q8N129 248 aa11.97□□□□□ -0.49
GSK3A-202ENST00000398249 PLCH2O75038 1416 aa11.96□□□□□ -0.49
GSK3A-202ENST00000398249 MYOM1P52179 1685 aa11.96□□□□□ -0.49
GSK3A-202ENST00000398249 FTSJ3Q8IY81 847 aaKnown RBP11.96□□□□□ -0.5
GSK3A-202ENST00000398249 ZHX1Q9UKY1 873 aaPredicted RBP11.96□□□□□ -0.5
GSK3A-202ENST00000398249 MAPK8IP2Q13387 824 aaPredicted RBP11.95□□□□□ -0.5
GSK3A-202ENST00000398249 PANK3Q9H999 370 aa11.95□□□□□ -0.5
GSK3A-202ENST00000398249 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
GSK3A-202ENST00000398249 PNNQ9H307 717 aaKnown RBP11.95□□□□□ -0.5
GSK3A-202ENST00000398249 WDR7Q9Y4E6 1490 aa11.95□□□□□ -0.5
GSK3A-202ENST00000398249 IQGAP3Q86VI3 1631 aa11.95□□□□□ -0.5
GSK3A-202ENST00000398249 ABCC1P33527 1531 aa11.94□□□□□ -0.5
GSK3A-202ENST00000398249 ERBINQ96RT1 1412 aa11.94□□□□□ -0.5
GSK3A-202ENST00000398249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.94□□□□□ -0.5
GSK3A-202ENST00000398249 IQGAP1P46940 1657 aa11.93□□□□□ -0.5
GSK3A-202ENST00000398249 DUOX2Q9NRD8 1548 aa11.93□□□□□ -0.5
GSK3A-202ENST00000398249 SEC24BO95487 1268 aa11.93□□□□□ -0.5
GSK3A-202ENST00000398249 WWC1Q8IX03 1113 aa11.93□□□□□ -0.5
GSK3A-202ENST00000398249 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
GSK3A-202ENST00000398249 HNRNPMP52272 730 aaKnown RBP eCLIP11.93□□□□□ -0.5
GSK3A-202ENST00000398249 TRMT2AQ8IZ69 625 aaKnown RBP11.93□□□□□ -0.5
GSK3A-202ENST00000398249 ARID3AQ99856 593 aa11.92□□□□□ -0.5
GSK3A-202ENST00000398249 PRDM4Q9UKN5 801 aa11.92□□□□□ -0.5
GSK3A-202ENST00000398249 POGKQ9P215 609 aa11.91□□□□□ -0.5
GSK3A-202ENST00000398249 EIF2AK4Q9P2K8 1649 aaKnown RBP11.91□□□□□ -0.5
GSK3A-202ENST00000398249 IGHDP01880 384 aa11.91□□□□□ -0.5
GSK3A-202ENST00000398249 RRAGDQ9NQL2 400 aaPredicted RBP11.9□□□□□ -0.5
GSK3A-202ENST00000398249 ATP10AO60312 1499 aa11.9□□□□□ -0.5
GSK3A-202ENST00000398249 ABCA9Q8IUA7 1624 aa11.89□□□□□ -0.51
GSK3A-202ENST00000398249 RTEL1-TNFRSF6BF6WH68 1400 aa11.89□□□□□ -0.51
GSK3A-202ENST00000398249 CALD1Q05682 793 aaKnown RBP11.89□□□□□ -0.51
GSK3A-202ENST00000398249 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
GSK3A-202ENST00000398249 EIF3AQ14152 1382 aaKnown RBP11.89□□□□□ -0.51
GSK3A-202ENST00000398249 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
GSK3A-202ENST00000398249 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
GSK3A-202ENST00000398249 BCAR3O75815 825 aa11.87□□□□□ -0.51
GSK3A-202ENST00000398249 ZNF830Q96NB3 372 aaPredicted RBP11.87□□□□□ -0.51
GSK3A-202ENST00000398249 ANTXR1Q9H6X2 564 aa11.87□□□□□ -0.51
GSK3A-202ENST00000398249 SYNMO15061 1565 aa11.87□□□□□ -0.51
GSK3A-202ENST00000398249 MADDQ8WXG6 1647 aa11.87□□□□□ -0.51
GSK3A-202ENST00000398249 RGL3Q3MIN7 710 aa11.87□□□□□ -0.51
GSK3A-202ENST00000398249 DMRT2Q9Y5R5 561 aa11.87□□□□□ -0.51
GSK3A-202ENST00000398249 PATL2C9JE40 543 aaKnown RBP11.87□□□□□ -0.51
GSK3A-202ENST00000398249 E9PSI1 815 aa11.87□□□□□ -0.51
GSK3A-202ENST00000398249 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms