RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 RFX1P22670 979 aa10.16□□□□□ -0.78
CEP290-202ENST00000397838 FBXW7Q969H0 707 aa10.16□□□□□ -0.78
CEP290-202ENST00000397838 HAX1O00165 279 aa10.15□□□□□ -0.78
CEP290-202ENST00000397838 GPR37L1O60883 481 aa10.15□□□□□ -0.78
CEP290-202ENST00000397838 AP1G2O75843 785 aa10.15□□□□□ -0.78
CEP290-202ENST00000397838 CD46P15529 392 aa10.15□□□□□ -0.78
CEP290-202ENST00000397838 KHSRPQ92945 711 aaKnown RBP eCLIP10.15□□□□□ -0.782e-6■■■□□ 16.3
CEP290-202ENST00000397838 CABLES1Q8TDN4 633 aa10.15□□□□□ -0.79
CEP290-202ENST00000397838 CDCA7LQ96GN5 454 aa10.15□□□□□ -0.79
CEP290-202ENST00000397838 RCCD1A6NED2 376 aa10.14□□□□□ -0.79
CEP290-202ENST00000397838 SPTLC1O15269 473 aa10.14□□□□□ -0.79
CEP290-202ENST00000397838 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
CEP290-202ENST00000397838 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
CEP290-202ENST00000397838 GJD4Q96KN9 370 aaPredicted RBP10.13□□□□□ -0.79
CEP290-202ENST00000397838 USP17L8P0C7I0 530 aa10.13□□□□□ -0.79
CEP290-202ENST00000397838 HMX1Q9NP08 348 aaPredicted RBP10.13□□□□□ -0.79
CEP290-202ENST00000397838 LILRB3O75022 631 aa10.12□□□□□ -0.79
CEP290-202ENST00000397838 PRSS12P56730 875 aa10.12□□□□□ -0.79
CEP290-202ENST00000397838 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
CEP290-202ENST00000397838 ZDHHC16Q969W1 377 aa10.11□□□□□ -0.79
CEP290-202ENST00000397838 COL9A1P20849 921 aa10.11□□□□□ -0.79
CEP290-202ENST00000397838 CFAP70Q5T0N1 1121 aa10.11□□□□□ -0.79
CEP290-202ENST00000397838 CERKQ8TCT0 537 aa10.11□□□□□ -0.79
CEP290-202ENST00000397838 EYA1Q99502 592 aa10.11□□□□□ -0.79
CEP290-202ENST00000397838 RBM27Q9P2N5 1060 aaKnown RBP10.11□□□□□ -0.79
CEP290-202ENST00000397838 PPP1R15AO75807 674 aaPredicted RBP10.1□□□□□ -0.79
CEP290-202ENST00000397838 DIXDC1Q155Q3 683 aa10.1□□□□□ -0.79
CEP290-202ENST00000397838 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
CEP290-202ENST00000397838 RBM46Q8TBY0 533 aaKnown RBP10.1□□□□□ -0.79
CEP290-202ENST00000397838 RBM25P49756 843 aaKnown RBP10.09□□□□□ -0.79
CEP290-202ENST00000397838 ZNF710Q8N1W2 664 aa10.09□□□□□ -0.79
CEP290-202ENST00000397838 NUDT7P0C024 238 aa10.09□□□□□ -0.79
CEP290-202ENST00000397838 SRPK2P78362 688 aaKnown RBP10.09□□□□□ -0.79
CEP290-202ENST00000397838 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
CEP290-202ENST00000397838 HLA-CQ95604 372 aa10.08□□□□□ -0.8
CEP290-202ENST00000397838 PBXIP1Q96AQ6 731 aa10.07□□□□□ -0.8
CEP290-202ENST00000397838 GUCA2AQ02747 115 aa10.06□□□□□ -0.8
CEP290-202ENST00000397838 TUSC1Q2TAM9 212 aa10.06□□□□□ -0.8
CEP290-202ENST00000397838 NUTM1Q86Y26 1132 aa10.06□□□□□ -0.8
CEP290-202ENST00000397838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.05□□□□□ -0.8
CEP290-202ENST00000397838 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
CEP290-202ENST00000397838 TRIM34Q9BYJ4 488 aa10.05□□□□□ -0.8
CEP290-202ENST00000397838 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
CEP290-202ENST00000397838 ACIN1Q9UKV3 1341 aaKnown RBP10.04□□□□□ -0.8
CEP290-202ENST00000397838 LOC105371045A0A1W2PR82 267 aa10.04□□□□□ -0.8
CEP290-202ENST00000397838 NUTM2BA6NNL0 878 aaPredicted RBP10.04□□□□□ -0.8
CEP290-202ENST00000397838 NUTM2EB1AL46 878 aaPredicted RBP10.04□□□□□ -0.8
CEP290-202ENST00000397838 NUTM2DQ5VT03 806 aaPredicted RBP10.04□□□□□ -0.8
CEP290-202ENST00000397838 NUTM2AQ8IVF1 878 aaPredicted RBP10.04□□□□□ -0.8
CEP290-202ENST00000397838 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
CEP290-202ENST00000397838 CTDSPL2Q05D32 466 aa10.04□□□□□ -0.8
CEP290-202ENST00000397838 SMAPO00193 183 aa10.03□□□□□ -0.8
CEP290-202ENST00000397838 IGSF3O75054 1194 aa10.03□□□□□ -0.8
CEP290-202ENST00000397838 GABBR2O75899 941 aa10.03□□□□□ -0.8
CEP290-202ENST00000397838 METRNQ9UJH8 293 aa10.03□□□□□ -0.8
CEP290-202ENST00000397838 PCDHGC3Q9UN70 934 aa10.03□□□□□ -0.8
CEP290-202ENST00000397838 UCN2Q96RP3 112 aa10.03□□□□□ -0.8
CEP290-202ENST00000397838 CLCN6P51797 869 aa10.02□□□□□ -0.81
CEP290-202ENST00000397838 SOCS7O14512 581 aa10.02□□□□□ -0.81
CEP290-202ENST00000397838 ARSIQ5FYB1 569 aa10.02□□□□□ -0.81
CEP290-202ENST00000397838 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
CEP290-202ENST00000397838 LRRN4Q8WUT4 740 aa10.01□□□□□ -0.81
CEP290-202ENST00000397838 PPP1R12CQ9BZL4 782 aa10.01□□□□□ -0.81
CEP290-202ENST00000397838 CDCA8Q53HL2 280 aa10.01□□□□□ -0.81
CEP290-202ENST00000397838 TMEM134Q9H6X4 195 aa10.01□□□□□ -0.81
CEP290-202ENST00000397838 NDUFB9Q9Y6M9 179 aa10.01□□□□□ -0.81
CEP290-202ENST00000397838 PALM3A6NDB9 673 aaPredicted RBP9.99□□□□□ -0.81
CEP290-202ENST00000397838 BRD1O95696 1058 aa9.99□□□□□ -0.81
CEP290-202ENST00000397838 SULF1Q8IWU6 871 aa9.99□□□□□ -0.81
CEP290-202ENST00000397838 SLC39A7Q92504 469 aa9.99□□□□□ -0.81
CEP290-202ENST00000397838 DCBLD2Q96PD2 775 aa9.98□□□□□ -0.81
CEP290-202ENST00000397838 HOXA2O43364 376 aa9.97□□□□□ -0.81
CEP290-202ENST00000397838 KDM4AO75164 1064 aa9.97□□□□□ -0.81
CEP290-202ENST00000397838 RDH13Q8NBN7 331 aa9.97□□□□□ -0.81
CEP290-202ENST00000397838 IVNS1ABPQ9Y6Y0 642 aa9.97□□□□□ -0.81
CEP290-202ENST00000397838 DNAJB2P25686 324 aa9.97□□□□□ -0.81
CEP290-202ENST00000397838 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
CEP290-202ENST00000397838 LMOD1P29536 600 aaPredicted RBP9.96□□□□□ -0.81
CEP290-202ENST00000397838 GJA5P36382 358 aa9.96□□□□□ -0.81
CEP290-202ENST00000397838 PRR7Q8TB68 274 aa9.96□□□□□ -0.81
CEP290-202ENST00000397838 ALG2Q9H553 416 aa9.96□□□□□ -0.81
CEP290-202ENST00000397838 TSC1Q92574 1164 aa9.96□□□□□ -0.82
CEP290-202ENST00000397838 ZBTB3Q9H5J0 574 aa9.96□□□□□ -0.82
CEP290-202ENST00000397838 PRM3Q9NNZ6 103 aa9.96□□□□□ -0.82
CEP290-202ENST00000397838 TMEM88BA6NKF7 163 aa9.95□□□□□ -0.82
CEP290-202ENST00000397838 POTEIP0CG38 1075 aa9.95□□□□□ -0.82
CEP290-202ENST00000397838 C7P10643 843 aa9.95□□□□□ -0.82
CEP290-202ENST00000397838 TATDN2Q93075 761 aa9.95□□□□□ -0.82
CEP290-202ENST00000397838 TFIP11Q9UBB9 837 aaKnown RBP9.95□□□□□ -0.82
CEP290-202ENST00000397838 CFAP99D6REC4 459 aa9.95□□□□□ -0.82
CEP290-202ENST00000397838 LHX6Q9UPM6 363 aa9.95□□□□□ -0.82
CEP290-202ENST00000397838 USTQ9Y2C2 406 aa9.95□□□□□ -0.82
CEP290-202ENST00000397838 CSB-PGBD3P0DP91 1061 aa9.94□□□□□ -0.82
CEP290-202ENST00000397838 FDX1P10109 184 aa9.94□□□□□ -0.82
CEP290-202ENST00000397838 KCNA1Q09470 495 aa9.94□□□□□ -0.82
CEP290-202ENST00000397838 PROX2Q3B8N5 592 aa9.94□□□□□ -0.82
CEP290-202ENST00000397838 PRPF38BQ5VTL8 546 aaKnown RBP9.94□□□□□ -0.82
CEP290-202ENST00000397838 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.94□□□□□ -0.82
CEP290-202ENST00000397838 HOXB3P14651 431 aaPredicted RBP9.94□□□□□ -0.82
CEP290-202ENST00000397838 SLC10A3P09131 477 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms