RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CHGAP10645 457 aaKnown RBP26.88■■□□□ 1.89
TSPAN4-204ENST00000397404 STAG3Q9UJ98 1225 aa26.87■■□□□ 1.89
TSPAN4-204ENST00000397404 HDGFP51858 240 aaKnown RBP26.86■■□□□ 1.89
TSPAN4-204ENST00000397404 ROCK2O75116 1388 aaKnown RBP26.85■■□□□ 1.89
TSPAN4-204ENST00000397404 NEXMIFQ5QGS0 1516 aa26.85■■□□□ 1.89
TSPAN4-204ENST00000397404 A2ML1A8K2U0 1454 aa26.82■■□□□ 1.88
TSPAN4-204ENST00000397404 RIMS1Q86UR5 1692 aaKnown RBP26.81■■□□□ 1.88
TSPAN4-204ENST00000397404 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.81■■□□□ 1.88
TSPAN4-204ENST00000397404 CARD11Q9BXL7 1154 aa26.81■■□□□ 1.88
TSPAN4-204ENST00000397404 PIK3C2GO75747 1445 aa26.8■■□□□ 1.88
TSPAN4-204ENST00000397404 SETBP1Q9Y6X0 1596 aa26.77■■□□□ 1.88
TSPAN4-204ENST00000397404 USP47Q96K76 1375 aa26.76■■□□□ 1.87
TSPAN4-204ENST00000397404 SETD1BQ9UPS6 1966 aaKnown RBP26.76■■□□□ 1.87
TSPAN4-204ENST00000397404 MYO5BQ9ULV0 1848 aa26.75■■□□□ 1.87
TSPAN4-204ENST00000397404 SLC24A1O60721 1099 aa26.74■■□□□ 1.87
TSPAN4-204ENST00000397404 UBR1Q8IWV7 1749 aa26.74■■□□□ 1.87
TSPAN4-204ENST00000397404 HSPA5P11021 654 aaKnown RBP26.73■■□□□ 1.87
TSPAN4-204ENST00000397404 ADGRF5Q8IZF2 1346 aa26.73■■□□□ 1.87
TSPAN4-204ENST00000397404 EIF3AQ14152 1382 aaKnown RBP26.72■■□□□ 1.87
TSPAN4-204ENST00000397404 RIMS2Q9UQ26 1411 aa26.71■■□□□ 1.87
TSPAN4-204ENST00000397404 C14orf93Q9H972 538 aaKnown RBP26.71■■□□□ 1.87
TSPAN4-204ENST00000397404 MYO3AQ8NEV4 1616 aa26.7■■□□□ 1.87
TSPAN4-204ENST00000397404 CEBPAP49715 358 aaPredicted RBP26.69■■□□□ 1.86
TSPAN4-204ENST00000397404 THEMISQ8N1K5 641 aaPredicted RBP26.69■■□□□ 1.86
TSPAN4-204ENST00000397404 TMEM2Q9UHN6 1383 aa26.69■■□□□ 1.86
TSPAN4-204ENST00000397404 SCAF11Q99590 1463 aaKnown RBP26.69■■□□□ 1.86
TSPAN4-204ENST00000397404 SLIT1O75093 1534 aa26.67■■□□□ 1.86
TSPAN4-204ENST00000397404 PTPRMP28827 1452 aa26.66■■□□□ 1.86
TSPAN4-204ENST00000397404 ZNF142P52746 1687 aaPredicted RBP26.65■■□□□ 1.86
TSPAN4-204ENST00000397404 NBPF1Q3BBV0 1214 aa26.65■■□□□ 1.86
TSPAN4-204ENST00000397404 IQGAP1P46940 1657 aa26.64■■□□□ 1.86
TSPAN4-204ENST00000397404 CEP170BQ9Y4F5 1589 aaPredicted RBP26.64■■□□□ 1.86
TSPAN4-204ENST00000397404 ARHGAP23Q9P227 1491 aa26.63■■□□□ 1.85
TSPAN4-204ENST00000397404 POLR1AO95602 1720 aaPredicted RBP26.62■■□□□ 1.85
TSPAN4-204ENST00000397404 EID1Q9Y6B2 187 aa26.62■■□□□ 1.85
TSPAN4-204ENST00000397404 CFAP70Q5T0N1 1121 aa26.61■■□□□ 1.85
TSPAN4-204ENST00000397404 ADGRB1O14514 1584 aa26.6■■□□□ 1.85
TSPAN4-204ENST00000397404 DIEXFQ68CQ4 756 aaKnown RBP26.59■■□□□ 1.85
TSPAN4-204ENST00000397404 PLEKHG1Q9ULL1 1385 aa26.56■■□□□ 1.84
TSPAN4-204ENST00000397404 ST20-MTHFSA0A0A6YYL1 179 aa26.55■■□□□ 1.84
TSPAN4-204ENST00000397404 ALKQ9UM73 1620 aa26.55■■□□□ 1.84
TSPAN4-204ENST00000397404 SBNO2Q9Y2G9 1366 aa26.54■■□□□ 1.84
TSPAN4-204ENST00000397404 CDCA8Q53HL2 280 aa26.51■■□□□ 1.83
TSPAN4-204ENST00000397404 DIP2AQ14689 1571 aa26.5■■□□□ 1.83
TSPAN4-204ENST00000397404 CCDC7Q96M83 1385 aa26.5■■□□□ 1.83
TSPAN4-204ENST00000397404 HIRIP3Q9BW71 556 aaPredicted RBP26.49■■□□□ 1.83
TSPAN4-204ENST00000397404 NUTM2DQ5VT03 806 aaPredicted RBP26.49■■□□□ 1.83
TSPAN4-204ENST00000397404 TXNDC2Q86VQ3 553 aa26.49■■□□□ 1.83
TSPAN4-204ENST00000397404 TMF1P82094 1093 aa26.48■■□□□ 1.83
TSPAN4-204ENST00000397404 PLPPR3Q6T4P5 718 aa26.48■■□□□ 1.83
TSPAN4-204ENST00000397404 WASHC2AQ641Q2 1341 aa26.47■■□□□ 1.83
TSPAN4-204ENST00000397404 NRXN3Q9Y4C0 1643 aa26.46■■□□□ 1.83
TSPAN4-204ENST00000397404 SETD1AO15047 1707 aaKnown RBP26.46■■□□□ 1.83
TSPAN4-204ENST00000397404 DLC1Q96QB1 1528 aa26.45■■□□□ 1.82
TSPAN4-204ENST00000397404 TESK2Q96S53 571 aa26.45■■□□□ 1.82
TSPAN4-204ENST00000397404 YTHDC2Q9H6S0 1430 aaKnown RBP26.44■■□□□ 1.82
TSPAN4-204ENST00000397404 KIF7Q2M1P5 1343 aa26.43■■□□□ 1.82
TSPAN4-204ENST00000397404 CENPJQ9HC77 1338 aaPredicted RBP26.43■■□□□ 1.82
TSPAN4-204ENST00000397404 ANKLE2Q86XL3 938 aa26.43■■□□□ 1.82
TSPAN4-204ENST00000397404 ASXL1Q8IXJ9 1541 aa26.43■■□□□ 1.82
TSPAN4-204ENST00000397404 LRPPRCP42704 1394 aaKnown RBP26.43■■□□□ 1.82
TSPAN4-204ENST00000397404 SIRT1Q96EB6 747 aa26.42■■□□□ 1.82
TSPAN4-204ENST00000397404 ABCC11Q96J66 1382 aa26.42■■□□□ 1.82
TSPAN4-204ENST00000397404 LTKP29376 864 aa26.42■■□□□ 1.82
TSPAN4-204ENST00000397404 MED14O60244 1454 aa26.41■■□□□ 1.82
TSPAN4-204ENST00000397404 PIK3R4Q99570 1358 aa26.4■■□□□ 1.82
TSPAN4-204ENST00000397404 TBX22Q9Y458 520 aa26.4■■□□□ 1.82
TSPAN4-204ENST00000397404 ARHGEF28Q8N1W1 1705 aaKnown RBP26.39■■□□□ 1.82
TSPAN4-204ENST00000397404 TMEM132EQ6IEE7 984 aa26.39■■□□□ 1.82
TSPAN4-204ENST00000397404 PUS7Q96PZ0 661 aaKnown RBP26.39■■□□□ 1.82
TSPAN4-204ENST00000397404 TECPR2O15040 1411 aa26.39■■□□□ 1.81
TSPAN4-204ENST00000397404 ADAMTS13Q76LX8 1427 aa26.39■■□□□ 1.81
TSPAN4-204ENST00000397404 KNDC1Q76NI1 1749 aa26.38■■□□□ 1.81
TSPAN4-204ENST00000397404 BCANQ96GW7 911 aa26.37■■□□□ 1.81
TSPAN4-204ENST00000397404 DDX10Q13206 875 aaKnown RBP26.36■■□□□ 1.81
TSPAN4-204ENST00000397404 TRAK1Q9UPV9 953 aa26.36■■□□□ 1.81
TSPAN4-204ENST00000397404 FAM135BQ49AJ0 1406 aa26.35■■□□□ 1.81
TSPAN4-204ENST00000397404 KDM4FA0A1W2PPD8 638 aa26.35■■□□□ 1.81
TSPAN4-204ENST00000397404 C11orf95C9JLR9 678 aaPredicted RBP26.35■■□□□ 1.81
TSPAN4-204ENST00000397404 QRICH2Q9H0J4 1663 aa26.33■■□□□ 1.81
TSPAN4-204ENST00000397404 CPS1P31327 1500 aa26.31■■□□□ 1.8
TSPAN4-204ENST00000397404 METP08581 1390 aa26.3■■□□□ 1.8
TSPAN4-204ENST00000397404 DISP3Q9P2K9 1392 aa26.29■■□□□ 1.8
TSPAN4-204ENST00000397404 POGKQ9P215 609 aa26.28■■□□□ 1.8
TSPAN4-204ENST00000397404 EVC2Q86UK5 1308 aa26.28■■□□□ 1.8
TSPAN4-204ENST00000397404 PTCH1Q13635 1447 aa26.26■■□□□ 1.79
TSPAN4-204ENST00000397404 NPHP4O75161 1426 aaPredicted RBP26.25■■□□□ 1.79
TSPAN4-204ENST00000397404 STK26Q9P289 416 aa26.24■■□□□ 1.79
TSPAN4-204ENST00000397404 NINLQ9Y2I6 1382 aa26.23■■□□□ 1.79
TSPAN4-204ENST00000397404 PRAM1Q96QH2 718 aa26.23■■□□□ 1.79
TSPAN4-204ENST00000397404 ANP32CO43423 234 aa26.21■■□□□ 1.79
TSPAN4-204ENST00000397404 SLC26A8Q96RN1 970 aa26.19■■□□□ 1.78
TSPAN4-204ENST00000397404 POLR3GLQ9BT43 218 aa26.18■■□□□ 1.78
TSPAN4-204ENST00000397404 XRN1Q8IZH2 1706 aaKnown RBP26.18■■□□□ 1.78
TSPAN4-204ENST00000397404 ATAD2Q6PL18 1390 aa26.17■■□□□ 1.78
TSPAN4-204ENST00000397404 KTN1Q86UP2 1357 aaKnown RBP26.17■■□□□ 1.78
TSPAN4-204ENST00000397404 LMTK3Q96Q04 1460 aa26.16■■□□□ 1.78
TSPAN4-204ENST00000397404 AMOTL2Q9Y2J4 779 aa26.15■■□□□ 1.78
TSPAN4-204ENST00000397404 ADGRB2O60241 1585 aa26.14■■□□□ 1.78
TSPAN4-204ENST00000397404 TULP4Q9NRJ4 1543 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms