RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 RGL3Q3MIN7 710 aa12.09□□□□□ -0.47
UCA1-201ENST00000397381 WDR7Q9Y4E6 1490 aa12.09□□□□□ -0.47
UCA1-201ENST00000397381 PIK3C2GO75747 1445 aa12.09□□□□□ -0.47
UCA1-201ENST00000397381 SLFN5Q08AF3 891 aa12.09□□□□□ -0.47
UCA1-201ENST00000397381 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
UCA1-201ENST00000397381 DNAJC5BQ9UF47 199 aa12.09□□□□□ -0.47
UCA1-201ENST00000397381 CDC42BPBQ9Y5S2 1711 aa12.09□□□□□ -0.47
UCA1-201ENST00000397381 CHMP7Q8WUX9 453 aaPredicted RBP12.08□□□□□ -0.48
UCA1-201ENST00000397381 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
UCA1-201ENST00000397381 SYNMO15061 1565 aa12.08□□□□□ -0.48
UCA1-201ENST00000397381 TRMT2AQ8IZ69 625 aaKnown RBP12.08□□□□□ -0.48
UCA1-201ENST00000397381 MAGI2Q86UL8 1455 aa12.08□□□□□ -0.48
UCA1-201ENST00000397381 PLXNC1O60486 1568 aa12.08□□□□□ -0.48
UCA1-201ENST00000397381 ABCC2Q92887 1545 aa12.07□□□□□ -0.48
UCA1-201ENST00000397381 IQGAP1P46940 1657 aa12.07□□□□□ -0.48
UCA1-201ENST00000397381 FAM43AQ8N2R8 423 aa12.07□□□□□ -0.48
UCA1-201ENST00000397381 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
UCA1-201ENST00000397381 FRAT2O75474 233 aaPredicted RBP12.07□□□□□ -0.48
UCA1-201ENST00000397381 CDCA8Q53HL2 280 aa12.07□□□□□ -0.48
UCA1-201ENST00000397381 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
UCA1-201ENST00000397381 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
UCA1-201ENST00000397381 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
UCA1-201ENST00000397381 NGEFQ8N5V2 710 aa12.06□□□□□ -0.48
UCA1-201ENST00000397381 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
UCA1-201ENST00000397381 NINLQ9Y2I6 1382 aa12.05□□□□□ -0.48
UCA1-201ENST00000397381 RGS3P49796 1198 aa12.05□□□□□ -0.48
UCA1-201ENST00000397381 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
UCA1-201ENST00000397381 SYCP2Q9BX26 1530 aa12.03□□□□□ -0.48
UCA1-201ENST00000397381 BECN1Q14457 450 aa12.03□□□□□ -0.48
UCA1-201ENST00000397381 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
UCA1-201ENST00000397381 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
UCA1-201ENST00000397381 MADDQ8WXG6 1647 aa12.03□□□□□ -0.48
UCA1-201ENST00000397381 DUOX2Q9NRD8 1548 aa12.03□□□□□ -0.48
UCA1-201ENST00000397381 E9PSI1 815 aa12.02□□□□□ -0.49
UCA1-201ENST00000397381 PDE3AQ14432 1141 aa12.02□□□□□ -0.49
UCA1-201ENST00000397381 STAC3Q96MF2 364 aa12.02□□□□□ -0.49
UCA1-201ENST00000397381 UBE2Q2Q8WVN8 375 aa12.01□□□□□ -0.49
UCA1-201ENST00000397381 USP19O94966 1318 aa12.01□□□□□ -0.49
UCA1-201ENST00000397381 SCAPERQ9BY12 1400 aa12.01□□□□□ -0.49
UCA1-201ENST00000397381 MYOM1P52179 1685 aa12□□□□□ -0.49
UCA1-201ENST00000397381 ZMYM3Q14202 1370 aa12□□□□□ -0.49
UCA1-201ENST00000397381 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
UCA1-201ENST00000397381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.495e-9■■□□□ 11.5
UCA1-201ENST00000397381 AAMPQ13685 434 aa11.99□□□□□ -0.49
UCA1-201ENST00000397381 L1TD1Q5T7N2 865 aaKnown RBP11.99□□□□□ -0.49
UCA1-201ENST00000397381 SPHKAPQ2M3C7 1700 aa11.99□□□□□ -0.49
UCA1-201ENST00000397381 ARHGAP5Q13017 1502 aa11.99□□□□□ -0.49
UCA1-201ENST00000397381 ERCC6Q03468 1493 aa11.99□□□□□ -0.49
UCA1-201ENST00000397381 KDM5AP29375 1690 aaKnown RBP11.98□□□□□ -0.49
UCA1-201ENST00000397381 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
UCA1-201ENST00000397381 IGHDP01880 384 aa11.98□□□□□ -0.49
UCA1-201ENST00000397381 APAF1O14727 1248 aa11.97□□□□□ -0.49
UCA1-201ENST00000397381 BCAR3O75815 825 aa11.97□□□□□ -0.49
UCA1-201ENST00000397381 FBLN2P98095 1184 aa11.97□□□□□ -0.49
UCA1-201ENST00000397381 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
UCA1-201ENST00000397381 KIAA1210Q9ULL0 1709 aa11.97□□□□□ -0.49
UCA1-201ENST00000397381 NLRP1Q9C000 1473 aa11.97□□□□□ -0.49
UCA1-201ENST00000397381 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.49
UCA1-201ENST00000397381 CEP152O94986 1710 aa11.96□□□□□ -0.49
UCA1-201ENST00000397381 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.49
UCA1-201ENST00000397381 SPINK5Q9NQ38 1064 aaPredicted RBP11.96□□□□□ -0.49
UCA1-201ENST00000397381 CENPJQ9HC77 1338 aaPredicted RBP11.96□□□□□ -0.5
UCA1-201ENST00000397381 TRPM2O94759 1503 aa11.95□□□□□ -0.5
UCA1-201ENST00000397381 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
UCA1-201ENST00000397381 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
UCA1-201ENST00000397381 UPF2Q9HAU5 1272 aaKnown RBP11.95□□□□□ -0.5
UCA1-201ENST00000397381 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.94□□□□□ -0.5
UCA1-201ENST00000397381 POGKQ9P215 609 aa11.94□□□□□ -0.5
UCA1-201ENST00000397381 CANXP27824 592 aaKnown RBP11.93□□□□□ -0.5
UCA1-201ENST00000397381 ANTXR1Q9H6X2 564 aa11.93□□□□□ -0.5
UCA1-201ENST00000397381 SEC24BO95487 1268 aa11.93□□□□□ -0.5
UCA1-201ENST00000397381 POLR3AO14802 1390 aaPredicted RBP11.92□□□□□ -0.5
UCA1-201ENST00000397381 TBC1D32Q96NH3 1257 aa11.91□□□□□ -0.5
UCA1-201ENST00000397381 PTPRTO14522 1441 aa11.91□□□□□ -0.5
UCA1-201ENST00000397381 NEURL4Q96JN8 1562 aa11.91□□□□□ -0.5
UCA1-201ENST00000397381 COG6Q9Y2V7 657 aa11.91□□□□□ -0.5
UCA1-201ENST00000397381 PANK1Q8TE04 598 aa11.9□□□□□ -0.5
UCA1-201ENST00000397381 SLKQ9H2G2 1235 aaPredicted RBP11.9□□□□□ -0.5
UCA1-201ENST00000397381 CLTCL1P53675 1640 aa11.89□□□□□ -0.51
UCA1-201ENST00000397381 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
UCA1-201ENST00000397381 WWC1Q8IX03 1113 aa11.89□□□□□ -0.51
UCA1-201ENST00000397381 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
UCA1-201ENST00000397381 ERVK-7P63135 1459 aa11.88□□□□□ -0.51
UCA1-201ENST00000397381 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
UCA1-201ENST00000397381 RWDD1Q9H446 243 aaPredicted RBP11.88□□□□□ -0.51
UCA1-201ENST00000397381 TET3O43151 1660 aa11.87□□□□□ -0.51
UCA1-201ENST00000397381 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
UCA1-201ENST00000397381 RRAGDQ9NQL2 400 aaPredicted RBP11.87□□□□□ -0.51
UCA1-201ENST00000397381 SHPRHQ149N8 1683 aa11.87□□□□□ -0.51
UCA1-201ENST00000397381 FSD2A1L4K1 749 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 GOLGA6L3A6NEY3 463 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 WDR63Q8IWG1 891 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 PDZRN3Q9UPQ7 1066 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 DEPDC5O75140 1603 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 MYO3AQ8NEV4 1616 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 ABCC1P33527 1531 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 MYOM2P54296 1465 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 IQSEC2Q5JU85 1478 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 PLCH2O75038 1416 aa11.86□□□□□ -0.51
UCA1-201ENST00000397381 RUNDC1Q96C34 613 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms