RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 GPRASP1Q5JY77 1395 aa11.89□□□□□ -0.51
CAPN3-206ENST00000397163 KNSTRNQ9Y448 316 aa11.89□□□□□ -0.51
CAPN3-206ENST00000397163 GLIPR1L2Q4G1C9 344 aa11.88□□□□□ -0.51
CAPN3-206ENST00000397163 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
CAPN3-206ENST00000397163 FAM135AQ9P2D6 1515 aa11.88□□□□□ -0.51
CAPN3-206ENST00000397163 PPP2R1AP30153 589 aa11.87□□□□□ -0.51
CAPN3-206ENST00000397163 TRPM1Q7Z4N2 1603 aa11.87□□□□□ -0.51
CAPN3-206ENST00000397163 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
CAPN3-206ENST00000397163 POGKQ9P215 609 aa11.86□□□□□ -0.51
CAPN3-206ENST00000397163 CDC42BPAQ5VT25 1732 aa11.86□□□□□ -0.51
CAPN3-206ENST00000397163 A2MP01023 1474 aa11.86□□□□□ -0.51
CAPN3-206ENST00000397163 CCDC146Q8IYE0 955 aa11.84□□□□□ -0.51
CAPN3-206ENST00000397163 ATP10BO94823 1461 aa11.84□□□□□ -0.51
CAPN3-206ENST00000397163 SLFN5Q08AF3 891 aa11.84□□□□□ -0.51
CAPN3-206ENST00000397163 CCDC141Q6ZP82 1450 aa11.83□□□□□ -0.52
CAPN3-206ENST00000397163 ZNF521Q96K83 1311 aa11.83□□□□□ -0.52
CAPN3-206ENST00000397163 PRDM15P57071 1507 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-206ENST00000397163 ZCCHC11Q5TAX3 1644 aaKnown RBP11.82□□□□□ -0.52
CAPN3-206ENST00000397163 PLA2R1Q13018 1463 aa11.82□□□□□ -0.52
CAPN3-206ENST00000397163 HSP90AA2PQ14568 343 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-206ENST00000397163 RSPH4AQ5TD94 716 aa11.82□□□□□ -0.52
CAPN3-206ENST00000397163 PODXL2Q9NZ53 605 aa11.82□□□□□ -0.52
CAPN3-206ENST00000397163 BCAR3O75815 825 aa11.81□□□□□ -0.52
CAPN3-206ENST00000397163 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-206ENST00000397163 APAF1O14727 1248 aa11.81□□□□□ -0.52
CAPN3-206ENST00000397163 MAGI2Q86UL8 1455 aa11.8□□□□□ -0.52
CAPN3-206ENST00000397163 ARHGEF5Q12774 1597 aa11.8□□□□□ -0.52
CAPN3-206ENST00000397163 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
CAPN3-206ENST00000397163 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-206ENST00000397163 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
CAPN3-206ENST00000397163 CANXP27824 592 aaKnown RBP11.79□□□□□ -0.52
CAPN3-206ENST00000397163 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-206ENST00000397163 IGHDP01880 384 aa11.79□□□□□ -0.52
CAPN3-206ENST00000397163 BECN1Q14457 450 aa11.78□□□□□ -0.52
CAPN3-206ENST00000397163 WDR7Q9Y4E6 1490 aa11.78□□□□□ -0.52
CAPN3-206ENST00000397163 LAMC1P11047 1609 aa11.78□□□□□ -0.52
CAPN3-206ENST00000397163 E9PSI1 815 aa11.77□□□□□ -0.52
CAPN3-206ENST00000397163 HSP90AA1P07900 732 aaKnown RBP11.77□□□□□ -0.52
CAPN3-206ENST00000397163 EIF2AK4Q9P2K8 1649 aaKnown RBP11.77□□□□□ -0.52
CAPN3-206ENST00000397163 TRMT2AQ8IZ69 625 aaKnown RBP11.77□□□□□ -0.53
CAPN3-206ENST00000397163 NKTRP30414 1462 aaKnown RBP11.77□□□□□ -0.53
CAPN3-206ENST00000397163 PNNQ9H307 717 aaKnown RBP11.77□□□□□ -0.53
CAPN3-206ENST00000397163 GZF1Q9H116 711 aaPredicted RBP11.76□□□□□ -0.53
CAPN3-206ENST00000397163 CGNL1Q0VF96 1302 aa11.76□□□□□ -0.53
CAPN3-206ENST00000397163 USP19O94966 1318 aa11.76□□□□□ -0.53
CAPN3-206ENST00000397163 SEC24BO95487 1268 aa11.75□□□□□ -0.53
CAPN3-206ENST00000397163 PANK2Q9BZ23 570 aa11.75□□□□□ -0.53
CAPN3-206ENST00000397163 MAPK8IP3Q9UPT6 1336 aa11.75□□□□□ -0.53
CAPN3-206ENST00000397163 COG6Q9Y2V7 657 aa11.75□□□□□ -0.53
CAPN3-206ENST00000397163 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
CAPN3-206ENST00000397163 PIK3C2GO75747 1445 aa11.74□□□□□ -0.53
CAPN3-206ENST00000397163 ASXL2Q76L83 1435 aa11.74□□□□□ -0.53
CAPN3-206ENST00000397163 PANK1Q8TE04 598 aa11.74□□□□□ -0.53
CAPN3-206ENST00000397163 CLUAP1Q96AJ1 413 aa11.74□□□□□ -0.53
CAPN3-206ENST00000397163 CENPJQ9HC77 1338 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-206ENST00000397163 A0A0U1RQG5 324 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-206ENST00000397163 ARAP3Q8WWN8 1544 aa11.74□□□□□ -0.53
CAPN3-206ENST00000397163 ASXL1Q8IXJ9 1541 aa11.73□□□□□ -0.53
CAPN3-206ENST00000397163 PDE3AQ14432 1141 aa11.73□□□□□ -0.53
CAPN3-206ENST00000397163 UPF2Q9HAU5 1272 aaKnown RBP11.73□□□□□ -0.53
CAPN3-206ENST00000397163 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
CAPN3-206ENST00000397163 SYCP2Q9BX26 1530 aa11.73□□□□□ -0.53
CAPN3-206ENST00000397163 SPRYD3Q8NCJ5 442 aa11.72□□□□□ -0.53
CAPN3-206ENST00000397163 UNC13BO14795 1591 aa11.72□□□□□ -0.53
CAPN3-206ENST00000397163 ARHGAP5Q13017 1502 aa11.71□□□□□ -0.53
CAPN3-206ENST00000397163 GLI2P10070 1586 aa11.71□□□□□ -0.53
CAPN3-206ENST00000397163 ABCA9Q8IUA7 1624 aa11.71□□□□□ -0.53
CAPN3-206ENST00000397163 L1TD1Q5T7N2 865 aaKnown RBP11.71□□□□□ -0.54
CAPN3-206ENST00000397163 MYO5CQ9NQX4 1742 aa11.7□□□□□ -0.54
CAPN3-206ENST00000397163 NEUROD2Q15784 382 aa11.7□□□□□ -0.54
CAPN3-206ENST00000397163 ATP10AO60312 1499 aa11.7□□□□□ -0.54
CAPN3-206ENST00000397163 SCAF11Q99590 1463 aaKnown RBP11.69□□□□□ -0.54
CAPN3-206ENST00000397163 PREX2Q70Z35 1606 aa11.69□□□□□ -0.54
CAPN3-206ENST00000397163 NPC1L1Q9UHC9 1359 aa11.69□□□□□ -0.54
CAPN3-206ENST00000397163 NGEFQ8N5V2 710 aa11.69□□□□□ -0.54
CAPN3-206ENST00000397163 RRP9O43818 475 aaKnown RBP11.69□□□□□ -0.54
CAPN3-206ENST00000397163 PMFBP1Q8TBY8 1022 aa11.69□□□□□ -0.54
CAPN3-206ENST00000397163 IQGAP3Q86VI3 1631 aa11.69□□□□□ -0.54
CAPN3-206ENST00000397163 NINLQ9Y2I6 1382 aa11.68□□□□□ -0.54
CAPN3-206ENST00000397163 CDC42BPBQ9Y5S2 1711 aa11.68□□□□□ -0.54
CAPN3-206ENST00000397163 XRCC6P12956 609 aaKnown RBP eCLIP11.68□□□□□ -0.54
CAPN3-206ENST00000397163 WWC1Q8IX03 1113 aa11.68□□□□□ -0.54
CAPN3-206ENST00000397163 SYNMO15061 1565 aa11.68□□□□□ -0.54
CAPN3-206ENST00000397163 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
CAPN3-206ENST00000397163 RNF17Q9BXT8 1623 aaKnown RBP11.67□□□□□ -0.54
CAPN3-206ENST00000397163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.67□□□□□ -0.54
CAPN3-206ENST00000397163 TRHP20396 242 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-206ENST00000397163 RRP7AQ9Y3A4 280 aaKnown RBP11.67□□□□□ -0.54
CAPN3-206ENST00000397163 TBC1D2Q9BYX2 928 aa11.66□□□□□ -0.54
CAPN3-206ENST00000397163 ANTXR1Q9H6X2 564 aa11.66□□□□□ -0.54
CAPN3-206ENST00000397163 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
CAPN3-206ENST00000397163 MAST1Q9Y2H9 1570 aa11.66□□□□□ -0.54
CAPN3-206ENST00000397163 TBC1D32Q96NH3 1257 aa11.66□□□□□ -0.54
CAPN3-206ENST00000397163 DUOX2Q9NRD8 1548 aa11.66□□□□□ -0.54
CAPN3-206ENST00000397163 BCL2L13Q9BXK5 485 aa11.65□□□□□ -0.54
CAPN3-206ENST00000397163 PCDHB15Q9Y5E8 787 aa11.65□□□□□ -0.54
CAPN3-206ENST00000397163 ARID3AQ99856 593 aa11.65□□□□□ -0.54
CAPN3-206ENST00000397163 TTC37Q6PGP7 1564 aa11.65□□□□□ -0.54
CAPN3-206ENST00000397163 RARSP54136 660 aaKnown RBP11.65□□□□□ -0.54
CAPN3-206ENST00000397163 CARD14Q9BXL6 1004 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms