RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
MCF2L-209ENST00000397036 HSPA5P11021 654 aaKnown RBP19.2■□□□□ 0.66
MCF2L-209ENST00000397036 MADDQ8WXG6 1647 aa19.19■□□□□ 0.66
MCF2L-209ENST00000397036 C3P01024 1663 aa19.19■□□□□ 0.66
MCF2L-209ENST00000397036 KDM5AP29375 1690 aaKnown RBP19.19■□□□□ 0.66
MCF2L-209ENST00000397036 HDGFP51858 240 aaKnown RBP19.19■□□□□ 0.66
MCF2L-209ENST00000397036 NEXMIFQ5QGS0 1516 aa19.19■□□□□ 0.66
MCF2L-209ENST00000397036 TRPM1Q7Z4N2 1603 aa19.19■□□□□ 0.66
MCF2L-209ENST00000397036 NBPF1Q3BBV0 1214 aa19.18■□□□□ 0.66
MCF2L-209ENST00000397036 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.18■□□□□ 0.66
MCF2L-209ENST00000397036 C14orf93Q9H972 538 aaKnown RBP19.18■□□□□ 0.66
MCF2L-209ENST00000397036 PIK3C2GO75747 1445 aa19.17■□□□□ 0.66
MCF2L-209ENST00000397036 PPLO60437 1756 aa19.16■□□□□ 0.66
MCF2L-209ENST00000397036 KIAA1210Q9ULL0 1709 aa19.16■□□□□ 0.66
MCF2L-209ENST00000397036 LAMC1P11047 1609 aa19.16■□□□□ 0.66
MCF2L-209ENST00000397036 USP47Q96K76 1375 aa19.16■□□□□ 0.66
MCF2L-209ENST00000397036 CFAP70Q5T0N1 1121 aa19.12■□□□□ 0.65
MCF2L-209ENST00000397036 RIMS2Q9UQ26 1411 aa19.12■□□□□ 0.65
MCF2L-209ENST00000397036 TMEM2Q9UHN6 1383 aa19.12■□□□□ 0.65
MCF2L-209ENST00000397036 SETD1BQ9UPS6 1966 aaKnown RBP19.12■□□□□ 0.65
MCF2L-209ENST00000397036 THEMISQ8N1K5 641 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-209ENST00000397036 RIMS1Q86UR5 1692 aaKnown RBP19.11■□□□□ 0.65
MCF2L-209ENST00000397036 SETBP1Q9Y6X0 1596 aa19.09■□□□□ 0.65
MCF2L-209ENST00000397036 SCAF11Q99590 1463 aaKnown RBP19.09■□□□□ 0.65
MCF2L-209ENST00000397036 PTPRMP28827 1452 aa19.08■□□□□ 0.64
MCF2L-209ENST00000397036 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.64
MCF2L-209ENST00000397036 MYO5BQ9ULV0 1848 aa19.08■□□□□ 0.64
MCF2L-209ENST00000397036 ST20-MTHFSA0A0A6YYL1 179 aa19.07■□□□□ 0.64
MCF2L-209ENST00000397036 SLC24A1O60721 1099 aa19.07■□□□□ 0.64
MCF2L-209ENST00000397036 UBR1Q8IWV7 1749 aa19.07■□□□□ 0.64
MCF2L-209ENST00000397036 ARHGAP23Q9P227 1491 aa19.06■□□□□ 0.64
MCF2L-209ENST00000397036 SLIT1O75093 1534 aa19.05■□□□□ 0.64
MCF2L-209ENST00000397036 DIEXFQ68CQ4 756 aaKnown RBP19.05■□□□□ 0.64
MCF2L-209ENST00000397036 NUTM2DQ5VT03 806 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-209ENST00000397036 ADGRB1O14514 1584 aa19.04■□□□□ 0.64
MCF2L-209ENST00000397036 EID1Q9Y6B2 187 aa19.04■□□□□ 0.64
MCF2L-209ENST00000397036 EIF3AQ14152 1382 aaKnown RBP19.03■□□□□ 0.64
MCF2L-209ENST00000397036 MYO3AQ8NEV4 1616 aa19.02■□□□□ 0.63
MCF2L-209ENST00000397036 TESK2Q96S53 571 aa19.01■□□□□ 0.63
MCF2L-209ENST00000397036 WASHC2AQ641Q2 1341 aa19.01■□□□□ 0.63
MCF2L-209ENST00000397036 PLEKHG1Q9ULL1 1385 aa19.01■□□□□ 0.63
MCF2L-209ENST00000397036 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
MCF2L-209ENST00000397036 TXNDC2Q86VQ3 553 aa19■□□□□ 0.63
MCF2L-209ENST00000397036 CCDC7Q96M83 1385 aa19■□□□□ 0.63
MCF2L-209ENST00000397036 CEP170BQ9Y4F5 1589 aaPredicted RBP19■□□□□ 0.63
MCF2L-209ENST00000397036 C11orf95C9JLR9 678 aaPredicted RBP19■□□□□ 0.63
MCF2L-209ENST00000397036 LTKP29376 864 aa19■□□□□ 0.63
MCF2L-209ENST00000397036 IQGAP1P46940 1657 aa18.99■□□□□ 0.63
MCF2L-209ENST00000397036 SBNO2Q9Y2G9 1366 aa18.99■□□□□ 0.63
MCF2L-209ENST00000397036 ALKQ9UM73 1620 aa18.98■□□□□ 0.63
MCF2L-209ENST00000397036 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
MCF2L-209ENST00000397036 KDM4FA0A1W2PPD8 638 aa18.97■□□□□ 0.63
MCF2L-209ENST00000397036 TMEM132EQ6IEE7 984 aa18.97■□□□□ 0.63
MCF2L-209ENST00000397036 ZNF142P52746 1687 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-209ENST00000397036 TMF1P82094 1093 aa18.95■□□□□ 0.62
MCF2L-209ENST00000397036 DDX10Q13206 875 aaKnown RBP18.95■□□□□ 0.62
MCF2L-209ENST00000397036 SIRT1Q96EB6 747 aa18.95■□□□□ 0.62
MCF2L-209ENST00000397036 TBX22Q9Y458 520 aa18.95■□□□□ 0.62
MCF2L-209ENST00000397036 MED14O60244 1454 aa18.94■□□□□ 0.62
MCF2L-209ENST00000397036 ABCC11Q96J66 1382 aa18.94■□□□□ 0.62
MCF2L-209ENST00000397036 ANKLE2Q86XL3 938 aa18.94■□□□□ 0.62
MCF2L-209ENST00000397036 YTHDC2Q9H6S0 1430 aaKnown RBP18.93■□□□□ 0.62
MCF2L-209ENST00000397036 LRPPRCP42704 1394 aaKnown RBP18.93■□□□□ 0.62
MCF2L-209ENST00000397036 CENPJQ9HC77 1338 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-209ENST00000397036 ASXL1Q8IXJ9 1541 aa18.93■□□□□ 0.62
MCF2L-209ENST00000397036 CDCA8Q53HL2 280 aa18.93■□□□□ 0.62
MCF2L-209ENST00000397036 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
MCF2L-209ENST00000397036 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
MCF2L-209ENST00000397036 NRXN3Q9Y4C0 1643 aa18.92■□□□□ 0.62
MCF2L-209ENST00000397036 PUS7Q96PZ0 661 aaKnown RBP18.9■□□□□ 0.62
MCF2L-209ENST00000397036 DLC1Q96QB1 1528 aa18.89■□□□□ 0.62
MCF2L-209ENST00000397036 METP08581 1390 aa18.89■□□□□ 0.61
MCF2L-209ENST00000397036 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
MCF2L-209ENST00000397036 POLR1AO95602 1720 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-209ENST00000397036 TECPR2O15040 1411 aa18.88■□□□□ 0.61
MCF2L-209ENST00000397036 BCANQ96GW7 911 aa18.87■□□□□ 0.61
MCF2L-209ENST00000397036 PIK3R4Q99570 1358 aa18.87■□□□□ 0.61
MCF2L-209ENST00000397036 DIP2AQ14689 1571 aa18.86■□□□□ 0.61
MCF2L-209ENST00000397036 DISP3Q9P2K9 1392 aa18.85■□□□□ 0.61
MCF2L-209ENST00000397036 FAM135BQ49AJ0 1406 aa18.85■□□□□ 0.61
MCF2L-209ENST00000397036 STK26Q9P289 416 aa18.84■□□□□ 0.61
MCF2L-209ENST00000397036 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
MCF2L-209ENST00000397036 SLC26A8Q96RN1 970 aa18.82■□□□□ 0.6
MCF2L-209ENST00000397036 PRAM1Q96QH2 718 aa18.81■□□□□ 0.6
MCF2L-209ENST00000397036 POGKQ9P215 609 aa18.81■□□□□ 0.6
MCF2L-209ENST00000397036 ARHGEF28Q8N1W1 1705 aaKnown RBP18.81■□□□□ 0.6
MCF2L-209ENST00000397036 EVC2Q86UK5 1308 aa18.79■□□□□ 0.6
MCF2L-209ENST00000397036 NPHP4O75161 1426 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-209ENST00000397036 KNDC1Q76NI1 1749 aa18.77■□□□□ 0.6
MCF2L-209ENST00000397036 MIER1Q8N108 512 aa18.77■□□□□ 0.6
MCF2L-209ENST00000397036 AMOTL2Q9Y2J4 779 aa18.77■□□□□ 0.6
MCF2L-209ENST00000397036 PTPRUQ92729 1446 aa18.77■□□□□ 0.6
MCF2L-209ENST00000397036 CPS1P31327 1500 aa18.77■□□□□ 0.6
MCF2L-209ENST00000397036 POLR3GLQ9BT43 218 aa18.76■□□□□ 0.59
MCF2L-209ENST00000397036 PTCH1Q13635 1447 aa18.75■□□□□ 0.59
MCF2L-209ENST00000397036 QRICH2Q9H0J4 1663 aa18.75■□□□□ 0.59
MCF2L-209ENST00000397036 ANP32CO43423 234 aa18.74■□□□□ 0.59
MCF2L-209ENST00000397036 WAPLQ7Z5K2 1190 aa18.74■□□□□ 0.59
MCF2L-209ENST00000397036 NCKAP5LQ9HCH0 1330 aa18.74■□□□□ 0.59
MCF2L-209ENST00000397036 ROBO2Q9HCK4 1378 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms