RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
NDE1-201ENST00000396354 TRPM2O94759 1503 aa12.5□□□□□ -0.41
NDE1-201ENST00000396354 KIF13AQ9H1H9 1805 aa12.5□□□□□ -0.41
NDE1-201ENST00000396354 MAP3K4Q9Y6R4 1608 aa12.49□□□□□ -0.41
NDE1-201ENST00000396354 PLIN1O60240 522 aa12.49□□□□□ -0.41
NDE1-201ENST00000396354 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
NDE1-201ENST00000396354 CEP152O94986 1710 aa12.49□□□□□ -0.41
NDE1-201ENST00000396354 TET3O43151 1660 aa12.49□□□□□ -0.41
NDE1-201ENST00000396354 ZBED9Q6R2W3 1325 aa12.49□□□□□ -0.41
NDE1-201ENST00000396354 GLI2P10070 1586 aa12.49□□□□□ -0.41
NDE1-201ENST00000396354 PTPRTO14522 1441 aa12.49□□□□□ -0.41
NDE1-201ENST00000396354 KIF3BO15066 747 aa12.49□□□□□ -0.41
NDE1-201ENST00000396354 LAMC1P11047 1609 aa12.48□□□□□ -0.41
NDE1-201ENST00000396354 FRMPD1Q5SYB0 1578 aa12.48□□□□□ -0.41
NDE1-201ENST00000396354 COL17A1Q9UMD9 1497 aaPredicted RBP12.48□□□□□ -0.41
NDE1-201ENST00000396354 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
NDE1-201ENST00000396354 PPRC1Q5VV67 1664 aaKnown RBP12.47□□□□□ -0.41
NDE1-201ENST00000396354 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
NDE1-201ENST00000396354 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.42
NDE1-201ENST00000396354 LAS1LQ9Y4W2 734 aaKnown RBP12.46□□□□□ -0.42
NDE1-201ENST00000396354 MROH2AA6NES4 1674 aa12.46□□□□□ -0.42
NDE1-201ENST00000396354 RAPGEF3O95398 923 aa12.45□□□□□ -0.42
NDE1-201ENST00000396354 EIF2AK4Q9P2K8 1649 aaKnown RBP12.45□□□□□ -0.42
NDE1-201ENST00000396354 IQGAP1P46940 1657 aa12.45□□□□□ -0.42
NDE1-201ENST00000396354 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
NDE1-201ENST00000396354 EXOC6Q8TAG9 804 aa12.44□□□□□ -0.42
NDE1-201ENST00000396354 DEKP35659 375 aaKnown RBP12.44□□□□□ -0.42
NDE1-201ENST00000396354 NUDCQ9Y266 331 aa12.44□□□□□ -0.42
NDE1-201ENST00000396354 CFAP65Q6ZU64 1925 aaKnown RBP12.44□□□□□ -0.42
NDE1-201ENST00000396354 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
NDE1-201ENST00000396354 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
NDE1-201ENST00000396354 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
NDE1-201ENST00000396354 NOP58Q9Y2X3 529 aaKnown RBP12.43□□□□□ -0.42
NDE1-201ENST00000396354 EFCAB6Q5THR3 1501 aa12.43□□□□□ -0.42
NDE1-201ENST00000396354 ABCA6Q8N139 1617 aa12.43□□□□□ -0.42
NDE1-201ENST00000396354 POGZQ7Z3K3 1410 aa12.42□□□□□ -0.42
NDE1-201ENST00000396354 CFAP74Q9C0B2 1584 aa12.42□□□□□ -0.42
NDE1-201ENST00000396354 NEO1Q92859 1461 aa12.42□□□□□ -0.42
NDE1-201ENST00000396354 ZNF518AQ6AHZ1 1483 aa12.42□□□□□ -0.42
NDE1-201ENST00000396354 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
NDE1-201ENST00000396354 PARD3Q8TEW0 1356 aa12.39□□□□□ -0.43
NDE1-201ENST00000396354 ADGRF5Q8IZF2 1346 aa12.39□□□□□ -0.43
NDE1-201ENST00000396354 IFT172Q9UG01 1749 aa12.39□□□□□ -0.43
NDE1-201ENST00000396354 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
NDE1-201ENST00000396354 SIGLEC1Q9BZZ2 1709 aa12.38□□□□□ -0.43
NDE1-201ENST00000396354 PANK3Q9H999 370 aa12.38□□□□□ -0.43
NDE1-201ENST00000396354 LRPPRCP42704 1394 aaKnown RBP12.38□□□□□ -0.43
NDE1-201ENST00000396354 HECW2Q9P2P5 1572 aa12.38□□□□□ -0.43
NDE1-201ENST00000396354 RTL5Q5HYW3 569 aaPredicted RBP12.38□□□□□ -0.43
NDE1-201ENST00000396354 MYOM1P52179 1685 aa12.37□□□□□ -0.43
NDE1-201ENST00000396354 NPATQ14207 1427 aa12.37□□□□□ -0.43
NDE1-201ENST00000396354 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
NDE1-201ENST00000396354 CFAP70Q5T0N1 1121 aa12.37□□□□□ -0.43
NDE1-201ENST00000396354 KANK1Q14678 1352 aa12.37□□□□□ -0.43
NDE1-201ENST00000396354 SLC4A3P48751 1232 aa12.36□□□□□ -0.43
NDE1-201ENST00000396354 LMTK2Q8IWU2 1503 aa12.36□□□□□ -0.43
NDE1-201ENST00000396354 RICTORQ6R327 1708 aa12.35□□□□□ -0.43
NDE1-201ENST00000396354 MLH3Q9UHC1 1453 aa12.35□□□□□ -0.43
NDE1-201ENST00000396354 KIF1BO60333 1816 aa12.35□□□□□ -0.43
NDE1-201ENST00000396354 RCAN3Q9UKA8 241 aa12.35□□□□□ -0.43
NDE1-201ENST00000396354 GGT6Q6P531 493 aa12.35□□□□□ -0.43
NDE1-201ENST00000396354 SCAF11Q99590 1463 aaKnown RBP12.34□□□□□ -0.43
NDE1-201ENST00000396354 BRD4O60885 1362 aaPredicted RBP12.34□□□□□ -0.43
NDE1-201ENST00000396354 ADGRB3O60242 1522 aa12.34□□□□□ -0.43
NDE1-201ENST00000396354 DIP2CQ9Y2E4 1556 aa12.34□□□□□ -0.43
NDE1-201ENST00000396354 ABCC3O15438 1527 aa12.33□□□□□ -0.44
NDE1-201ENST00000396354 YEATS2Q9ULM3 1422 aa12.33□□□□□ -0.44
NDE1-201ENST00000396354 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.44
NDE1-201ENST00000396354 NOS1P29475 1434 aa12.32□□□□□ -0.44
NDE1-201ENST00000396354 RALBP1Q15311 655 aa12.32□□□□□ -0.44
NDE1-201ENST00000396354 SMG6Q86US8 1419 aaKnown RBP12.32□□□□□ -0.44
NDE1-201ENST00000396354 TNNT2P45379 298 aaPredicted RBP12.32□□□□□ -0.44
NDE1-201ENST00000396354 TMF1P82094 1093 aa12.32□□□□□ -0.44
NDE1-201ENST00000396354 CCDC146Q8IYE0 955 aa12.32□□□□□ -0.44
NDE1-201ENST00000396354 MYOM2P54296 1465 aa12.32□□□□□ -0.44
NDE1-201ENST00000396354 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
NDE1-201ENST00000396354 KIAA1210Q9ULL0 1709 aa12.31□□□□□ -0.44
NDE1-201ENST00000396354 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
NDE1-201ENST00000396354 RRP1P56182 461 aaKnown RBP12.31□□□□□ -0.44
NDE1-201ENST00000396354 SYNMO15061 1565 aa12.31□□□□□ -0.44
NDE1-201ENST00000396354 CAMSAP1Q5T5Y3 1602 aa12.3□□□□□ -0.44
NDE1-201ENST00000396354 PPLO60437 1756 aa12.3□□□□□ -0.44
NDE1-201ENST00000396354 RGS3P49796 1198 aa12.3□□□□□ -0.44
NDE1-201ENST00000396354 ERVK-7P63135 1459 aa12.3□□□□□ -0.44
NDE1-201ENST00000396354 C20orf194Q5TEA3 1177 aa12.3□□□□□ -0.44
NDE1-201ENST00000396354 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
NDE1-201ENST00000396354 NUTM2DQ5VT03 806 aaPredicted RBP12.3□□□□□ -0.44
NDE1-201ENST00000396354 NLRP13Q86W25 1043 aa12.3□□□□□ -0.44
NDE1-201ENST00000396354 IPO9Q96P70 1041 aaKnown RBP12.29□□□□□ -0.44
NDE1-201ENST00000396354 CHGAP10645 457 aaKnown RBP12.28□□□□□ -0.44
NDE1-201ENST00000396354 ERICH6BQ5W0A0 696 aa12.28□□□□□ -0.44
NDE1-201ENST00000396354 CRBNQ96SW2 442 aa12.28□□□□□ -0.44
NDE1-201ENST00000396354 NEFMP07197 916 aa12.27□□□□□ -0.45
NDE1-201ENST00000396354 ADGRB1O14514 1584 aa12.27□□□□□ -0.45
NDE1-201ENST00000396354 WASHC2CQ9Y4E1 1318 aa12.26□□□□□ -0.45
NDE1-201ENST00000396354 PIK3C2GO75747 1445 aa12.26□□□□□ -0.45
NDE1-201ENST00000396354 TMEM132EQ6IEE7 984 aa12.26□□□□□ -0.45
NDE1-201ENST00000396354 ZMYM4Q5VZL5 1548 aa12.26□□□□□ -0.45
NDE1-201ENST00000396354 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
NDE1-201ENST00000396354 MYO5BQ9ULV0 1848 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms