RNA–Protein interactions for RNA: ENST00000396212.6

CCP110-203, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-203ENST00000396212 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
CCP110-203ENST00000396212 MAP7D2Q96T17 732 aa17.33■□□□□ 0.36
CCP110-203ENST00000396212 CAVIN1Q6NZI2 390 aaKnown RBP17.33■□□□□ 0.36
CCP110-203ENST00000396212 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
CCP110-203ENST00000396212 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
CCP110-203ENST00000396212 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
CCP110-203ENST00000396212 BICD2Q8TD16 824 aa17.32■□□□□ 0.36
CCP110-203ENST00000396212 BACH2Q9BYV9 841 aa17.31■□□□□ 0.36
CCP110-203ENST00000396212 DIAPH3Q9NSV4 1193 aa17.31■□□□□ 0.36
CCP110-203ENST00000396212 VPS37CA5D8V6 355 aaPredicted RBP17.3■□□□□ 0.36
CCP110-203ENST00000396212 TOP2AP11388 1531 aaKnown RBP17.3■□□□□ 0.36
CCP110-203ENST00000396212 MTERF4Q7Z6M4 381 aaKnown RBP17.3■□□□□ 0.36
CCP110-203ENST00000396212 TOMM22Q9NS69 142 aa17.3■□□□□ 0.36
CCP110-203ENST00000396212 PATL2C9JE40 543 aaKnown RBP17.3■□□□□ 0.36
CCP110-203ENST00000396212 HDGFP51858 240 aaKnown RBP17.29■□□□□ 0.36
CCP110-203ENST00000396212 KIF3BO15066 747 aa17.29■□□□□ 0.36
CCP110-203ENST00000396212 INTS3Q68E01 1043 aaKnown RBP17.29■□□□□ 0.36
CCP110-203ENST00000396212 TAF7LQ5H9L4 462 aa17.29■□□□□ 0.36
CCP110-203ENST00000396212 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
CCP110-203ENST00000396212 CCDC173Q0VFZ6 552 aa17.28■□□□□ 0.36
CCP110-203ENST00000396212 HDAC5Q9UQL6 1122 aa17.28■□□□□ 0.36
CCP110-203ENST00000396212 SASS6Q6UVJ0 657 aa17.27■□□□□ 0.36
CCP110-203ENST00000396212 SMC3Q9UQE7 1217 aa17.27■□□□□ 0.35
CCP110-203ENST00000396212 TSR1Q2NL82 804 aaKnown RBP17.26■□□□□ 0.35
CCP110-203ENST00000396212 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
CCP110-203ENST00000396212 FOSBP53539 338 aa17.25■□□□□ 0.35
CCP110-203ENST00000396212 RIPK4P57078 832 aa17.25■□□□□ 0.35
CCP110-203ENST00000396212 PRPF40AO75400 957 aaKnown RBP17.25■□□□□ 0.35
CCP110-203ENST00000396212 TPM1P09493 284 aa17.25■□□□□ 0.35
CCP110-203ENST00000396212 MNS1Q8NEH6 495 aa17.25■□□□□ 0.35
CCP110-203ENST00000396212 ADAMTS8Q9UP79 889 aa17.25■□□□□ 0.35
CCP110-203ENST00000396212 CHMP4AQ9BY43 222 aa17.24■□□□□ 0.35
CCP110-203ENST00000396212 GRPEL1Q9HAV7 217 aa17.24■□□□□ 0.35
CCP110-203ENST00000396212 PDZRN3Q9UPQ7 1066 aa17.24■□□□□ 0.35
CCP110-203ENST00000396212 RUNDC1Q96C34 613 aa17.24■□□□□ 0.35
CCP110-203ENST00000396212 CDC45O75419 566 aa17.23■□□□□ 0.35
CCP110-203ENST00000396212 ZKSCAN1P17029 563 aaPredicted RBP17.23■□□□□ 0.35
CCP110-203ENST00000396212 CCDC70Q6NSX1 233 aa17.23■□□□□ 0.35
CCP110-203ENST00000396212 ARGLU1Q9NWB6 273 aaPredicted RBP17.23■□□□□ 0.35
CCP110-203ENST00000396212 CSB-PGBD3P0DP91 1061 aa17.23■□□□□ 0.35
CCP110-203ENST00000396212 CARMIL2Q6F5E8 1435 aa17.23■□□□□ 0.35
CCP110-203ENST00000396212 AMPHP49418 695 aa17.23■□□□□ 0.35
CCP110-203ENST00000396212 TSPY26PQ9H489 355 aa17.22■□□□□ 0.35
CCP110-203ENST00000396212 BRD4O60885 1362 aaPredicted RBP17.22■□□□□ 0.35
CCP110-203ENST00000396212 EFCAB2Q5VUJ9 269 aa17.22■□□□□ 0.35
CCP110-203ENST00000396212 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
CCP110-203ENST00000396212 RUFY2Q8WXA3 655 aa17.22■□□□□ 0.35
CCP110-203ENST00000396212 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
CCP110-203ENST00000396212 MPNDQ8N594 471 aa17.22■□□□□ 0.35
CCP110-203ENST00000396212 NUTM2FA1L443 756 aa17.21■□□□□ 0.34
CCP110-203ENST00000396212 API5Q9BZZ5 524 aaKnown RBP17.2■□□□□ 0.34
CCP110-203ENST00000396212 UQCRHLA0A096LP55 91 aa17.2■□□□□ 0.34
CCP110-203ENST00000396212 UQCRHP07919 91 aa17.2■□□□□ 0.34
CCP110-203ENST00000396212 CCDC27Q2M243 656 aa17.2■□□□□ 0.34
CCP110-203ENST00000396212 NOM1Q5C9Z4 860 aaKnown RBP17.2■□□□□ 0.34
CCP110-203ENST00000396212 PODXL2Q9NZ53 605 aa17.2■□□□□ 0.34
CCP110-203ENST00000396212 RRP9O43818 475 aaKnown RBP17.19■□□□□ 0.34
CCP110-203ENST00000396212 CCDC184Q52MB2 194 aa17.19■□□□□ 0.34
CCP110-203ENST00000396212 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
CCP110-203ENST00000396212 SPC24Q8NBT2 197 aa17.18■□□□□ 0.34
CCP110-203ENST00000396212 PCMTD1Q96MG8 357 aaPredicted RBP17.18■□□□□ 0.34
CCP110-203ENST00000396212 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
CCP110-203ENST00000396212 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
CCP110-203ENST00000396212 CCDC66A2RUB6 948 aa17.17■□□□□ 0.34
CCP110-203ENST00000396212 IFIT2P09913 472 aaKnown RBP17.16■□□□□ 0.34
CCP110-203ENST00000396212 BCAR3O75815 825 aa17.16■□□□□ 0.34
CCP110-203ENST00000396212 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCP110-203ENST00000396212 TRIM5Q9C035 493 aa17.16■□□□□ 0.34
CCP110-203ENST00000396212 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
CCP110-203ENST00000396212 EIF2S2P20042 333 aaKnown RBP17.16■□□□□ 0.34
CCP110-203ENST00000396212 AAMPQ13685 434 aa17.16■□□□□ 0.34
CCP110-203ENST00000396212 ESPNB1AK53 854 aa17.15■□□□□ 0.34
CCP110-203ENST00000396212 CCDC73Q6ZRK6 1079 aa17.15■□□□□ 0.34
CCP110-203ENST00000396212 KIF21BO75037 1637 aa17.15■□□□□ 0.34
CCP110-203ENST00000396212 EVC2Q86UK5 1308 aa17.15■□□□□ 0.34
CCP110-203ENST00000396212 NGDNQ8NEJ9 315 aaKnown RBP17.15■□□□□ 0.34
CCP110-203ENST00000396212 CEP89Q96ST8 783 aa17.15■□□□□ 0.34
CCP110-203ENST00000396212 ROCK1Q13464 1354 aa17.14■□□□□ 0.34
CCP110-203ENST00000396212 CHMP4CQ96CF2 233 aa17.14■□□□□ 0.33
CCP110-203ENST00000396212 MBD3O95983 291 aa17.14■□□□□ 0.33
CCP110-203ENST00000396212 HMGN5P82970 282 aaKnown RBP17.14■□□□□ 0.33
CCP110-203ENST00000396212 COG3Q96JB2 828 aa17.13■□□□□ 0.33
CCP110-203ENST00000396212 MARCH6O60337 910 aa17.13■□□□□ 0.33
CCP110-203ENST00000396212 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
CCP110-203ENST00000396212 TRIM29Q14134 588 aa17.13■□□□□ 0.33
CCP110-203ENST00000396212 HSP90B2PQ58FF3 399 aa17.13■□□□□ 0.33
CCP110-203ENST00000396212 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
CCP110-203ENST00000396212 CPLX1O14810 134 aa17.13■□□□□ 0.33
CCP110-203ENST00000396212 LETM1O95202 739 aaPredicted RBP17.12■□□□□ 0.33
CCP110-203ENST00000396212 IPO7O95373 1038 aaKnown RBP17.12■□□□□ 0.33
CCP110-203ENST00000396212 RNF20Q5VTR2 975 aa17.12■□□□□ 0.33
CCP110-203ENST00000396212 PDILTQ8N807 584 aa17.12■□□□□ 0.33
CCP110-203ENST00000396212 C9orf78Q9NZ63 289 aaPredicted RBP17.12■□□□□ 0.33
CCP110-203ENST00000396212 C1orf115Q9H7X2 142 aa17.12■□□□□ 0.33
CCP110-203ENST00000396212 MCM4P33991 863 aa17.12■□□□□ 0.33
CCP110-203ENST00000396212 NEK4P51957 841 aa17.12■□□□□ 0.33
CCP110-203ENST00000396212 CWC15Q9P013 229 aaKnown RBP17.12■□□□□ 0.33
CCP110-203ENST00000396212 MINK1Q8N4C8 1332 aaPredicted RBP17.11■□□□□ 0.33
CCP110-203ENST00000396212 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
CCP110-203ENST00000396212 RSPH4AQ5TD94 716 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms