RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 LMTK2Q8IWU2 1503 aa22.11■■□□□ 1.13
VCPKMT-201ENST00000395859 NOS1P29475 1434 aa22.1■■□□□ 1.13
VCPKMT-201ENST00000395859 ERBINQ96RT1 1412 aa22.1■■□□□ 1.13
VCPKMT-201ENST00000395859 RGS12O14924 1447 aa22.09■■□□□ 1.13
VCPKMT-201ENST00000395859 STAG3Q9UJ98 1225 aa22.09■■□□□ 1.13
VCPKMT-201ENST00000395859 ZFYVE9O95405 1425 aa22.08■■□□□ 1.13
VCPKMT-201ENST00000395859 EP400Q96L91 3159 aa22.07■■□□□ 1.12
VCPKMT-201ENST00000395859 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.06■■□□□ 1.12
VCPKMT-201ENST00000395859 KIF15Q9NS87 1388 aa22.05■■□□□ 1.12
VCPKMT-201ENST00000395859 PLEKHG1Q9ULL1 1385 aa22.05■■□□□ 1.12
VCPKMT-201ENST00000395859 AFF2P51816 1311 aa22.05■■□□□ 1.12
VCPKMT-201ENST00000395859 MYOM3Q5VTT5 1437 aa22.02■■□□□ 1.12
VCPKMT-201ENST00000395859 SETD5Q9C0A6 1442 aa22■■□□□ 1.11
VCPKMT-201ENST00000395859 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
VCPKMT-201ENST00000395859 BRINP3Q76B58 766 aa21.99■■□□□ 1.11
VCPKMT-201ENST00000395859 C19orf44Q9H6X5 657 aa21.99■■□□□ 1.11
VCPKMT-201ENST00000395859 SLC52A1Q9NWF4 448 aa21.99■■□□□ 1.11
VCPKMT-201ENST00000395859 TBX22Q9Y458 520 aa21.99■■□□□ 1.11
VCPKMT-201ENST00000395859 RBM6P78332 1123 aaKnown RBP21.98■■□□□ 1.11
VCPKMT-201ENST00000395859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.97■■□□□ 1.11
VCPKMT-201ENST00000395859 CROCC2H7BZ55 1655 aa21.97■■□□□ 1.11
VCPKMT-201ENST00000395859 KANK1Q14678 1352 aa21.97■■□□□ 1.11
VCPKMT-201ENST00000395859 ABCC5O15440 1437 aa21.97■■□□□ 1.11
VCPKMT-201ENST00000395859 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
VCPKMT-201ENST00000395859 NUTM2BA6NNL0 878 aaPredicted RBP21.95■■□□□ 1.1
VCPKMT-201ENST00000395859 NUTM2EB1AL46 878 aaPredicted RBP21.95■■□□□ 1.1
VCPKMT-201ENST00000395859 NUTM2AQ8IVF1 878 aaPredicted RBP21.95■■□□□ 1.1
VCPKMT-201ENST00000395859 QTRT2Q9H974 415 aaKnown RBP21.95■■□□□ 1.1
VCPKMT-201ENST00000395859 SETBP1Q9Y6X0 1596 aa21.95■■□□□ 1.1
VCPKMT-201ENST00000395859 MYO5BQ9ULV0 1848 aa21.94■■□□□ 1.1
VCPKMT-201ENST00000395859 RRP7BPQ9NSQ0 103 aa21.94■■□□□ 1.1
VCPKMT-201ENST00000395859 RIMS2Q9UQ26 1411 aa21.94■■□□□ 1.1
VCPKMT-201ENST00000395859 NHSL1Q5SYE7 1610 aa21.94■■□□□ 1.1
VCPKMT-201ENST00000395859 ASXL1Q8IXJ9 1541 aa21.93■■□□□ 1.1
VCPKMT-201ENST00000395859 PIK3R4Q99570 1358 aa21.92■■□□□ 1.1
VCPKMT-201ENST00000395859 ATF3P18847 181 aa21.92■■□□□ 1.1
VCPKMT-201ENST00000395859 BCANQ96GW7 911 aa21.92■■□□□ 1.1
VCPKMT-201ENST00000395859 TMEM131LA2VDJ0 1609 aa21.91■■□□□ 1.1
VCPKMT-201ENST00000395859 DCCP43146 1447 aa21.91■■□□□ 1.1
VCPKMT-201ENST00000395859 ATAD2Q6PL18 1390 aa21.9■■□□□ 1.1
VCPKMT-201ENST00000395859 RPRD2Q5VT52 1461 aaKnown RBP21.89■■□□□ 1.09
VCPKMT-201ENST00000395859 NUTM2DQ5VT03 806 aaPredicted RBP21.88■■□□□ 1.09
VCPKMT-201ENST00000395859 C14orf37Q86TY3 774 aa21.88■■□□□ 1.09
VCPKMT-201ENST00000395859 ZRANB1Q9UGI0 708 aa21.88■■□□□ 1.09
VCPKMT-201ENST00000395859 GCC2Q8IWJ2 1684 aa21.88■■□□□ 1.09
VCPKMT-201ENST00000395859 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
VCPKMT-201ENST00000395859 C8orf37Q96NL8 207 aa21.87■■□□□ 1.09
VCPKMT-201ENST00000395859 MST1RQ04912 1400 aa21.87■■□□□ 1.09
VCPKMT-201ENST00000395859 PTPRUQ92729 1446 aa21.87■■□□□ 1.09
VCPKMT-201ENST00000395859 KANK4Q5T7N3 995 aaPredicted RBP21.86■■□□□ 1.09
VCPKMT-201ENST00000395859 LRRC59Q96AG4 307 aaKnown RBP21.85■■□□□ 1.09
VCPKMT-201ENST00000395859 DAPK1P53355 1430 aa21.84■■□□□ 1.09
VCPKMT-201ENST00000395859 HDGFP51858 240 aaKnown RBP21.84■■□□□ 1.09
VCPKMT-201ENST00000395859 PPP1R15AO75807 674 aaPredicted RBP21.82■■□□□ 1.08
VCPKMT-201ENST00000395859 NGLY1Q96IV0 654 aa21.82■■□□□ 1.08
VCPKMT-201ENST00000395859 TRPM2O94759 1503 aa21.8■■□□□ 1.08
VCPKMT-201ENST00000395859 FOXD1Q16676 465 aa21.8■■□□□ 1.08
VCPKMT-201ENST00000395859 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.8■■□□□ 1.08
VCPKMT-201ENST00000395859 AMOTL2Q9Y2J4 779 aa21.8■■□□□ 1.08
VCPKMT-201ENST00000395859 XRN1Q8IZH2 1706 aaKnown RBP21.8■■□□□ 1.08
VCPKMT-201ENST00000395859 PTPN23Q9H3S7 1636 aa21.79■■□□□ 1.08
VCPKMT-201ENST00000395859 LAMC1P11047 1609 aa21.77■■□□□ 1.08
VCPKMT-201ENST00000395859 ANKRD30AQ9BXX3 1397 aa21.76■■□□□ 1.07
VCPKMT-201ENST00000395859 UNC13BO14795 1591 aa21.76■■□□□ 1.07
VCPKMT-201ENST00000395859 ATRNO75882 1429 aa21.76■■□□□ 1.07
VCPKMT-201ENST00000395859 CCDC125Q86Z20 511 aa21.76■■□□□ 1.07
VCPKMT-201ENST00000395859 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
VCPKMT-201ENST00000395859 FNBP4Q8N3X1 1017 aaPredicted RBP21.76■■□□□ 1.07
VCPKMT-201ENST00000395859 DDX17Q92841 729 aaKnown RBP21.76■■□□□ 1.07
VCPKMT-201ENST00000395859 NRXN3Q9Y4C0 1643 aa21.73■■□□□ 1.07
VCPKMT-201ENST00000395859 TRPC5Q9UL62 973 aaPredicted RBP21.73■■□□□ 1.07
VCPKMT-201ENST00000395859 ADGRL2O95490 1459 aa21.72■■□□□ 1.07
VCPKMT-201ENST00000395859 ADAMTS2O95450 1211 aa21.72■■□□□ 1.07
VCPKMT-201ENST00000395859 USP21Q9UK80 565 aa21.72■■□□□ 1.07
VCPKMT-201ENST00000395859 LRP5O75197 1615 aa21.7■■□□□ 1.06
VCPKMT-201ENST00000395859 PTCH1Q13635 1447 aa21.7■■□□□ 1.06
VCPKMT-201ENST00000395859 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
VCPKMT-201ENST00000395859 CHIC2Q9UKJ5 165 aa21.69■■□□□ 1.06
VCPKMT-201ENST00000395859 SOS2Q07890 1332 aaPredicted RBP21.68■■□□□ 1.06
VCPKMT-201ENST00000395859 BCL9LQ86UU0 1499 aa21.66■■□□□ 1.06
VCPKMT-201ENST00000395859 NALCNQ8IZF0 1738 aa21.66■■□□□ 1.06
VCPKMT-201ENST00000395859 COL22A1Q8NFW1 1626 aaPredicted RBP21.66■■□□□ 1.06
VCPKMT-201ENST00000395859 C1orf167Q5SNV9 1468 aa21.65■■□□□ 1.06
VCPKMT-201ENST00000395859 E9PCH4 1651 aa21.64■■□□□ 1.05
VCPKMT-201ENST00000395859 ANKRD50Q9ULJ7 1429 aa21.63■■□□□ 1.05
VCPKMT-201ENST00000395859 METP08581 1390 aa21.63■■□□□ 1.05
VCPKMT-201ENST00000395859 CHGAP10645 457 aaKnown RBP21.62■■□□□ 1.05
VCPKMT-201ENST00000395859 MYOM2P54296 1465 aa21.62■■□□□ 1.05
VCPKMT-201ENST00000395859 BLMP54132 1417 aaPredicted RBP21.62■■□□□ 1.05
VCPKMT-201ENST00000395859 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.04
VCPKMT-201ENST00000395859 GJD4Q96KN9 370 aaPredicted RBP21.56■■□□□ 1.04
VCPKMT-201ENST00000395859 MARF1Q9Y4F3 1742 aaKnown RBP21.55■■□□□ 1.04
VCPKMT-201ENST00000395859 DEFB132Q7Z7B7 95 aa21.55■■□□□ 1.04
VCPKMT-201ENST00000395859 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.55■■□□□ 1.04
VCPKMT-201ENST00000395859 GLI3P10071 1580 aa21.54■■□□□ 1.04
VCPKMT-201ENST00000395859 ORAI2Q96SN7 254 aa21.54■■□□□ 1.04
VCPKMT-201ENST00000395859 SPHKAPQ2M3C7 1700 aa21.52■■□□□ 1.04
VCPKMT-201ENST00000395859 RALGAPBQ86X10 1494 aa21.5■■□□□ 1.03
VCPKMT-201ENST00000395859 BRWD3Q6RI45 1802 aa21.5■■□□□ 1.03
VCPKMT-201ENST00000395859 PRAG1Q86YV5 1406 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms