RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 MLH3Q9UHC1 1453 aa24.03■■□□□ 1.44
SREBF1-204ENST00000395756 YEATS2Q9ULM3 1422 aa24.02■■□□□ 1.44
SREBF1-204ENST00000395756 MADDQ8WXG6 1647 aa24.02■■□□□ 1.44
SREBF1-204ENST00000395756 SAFB2Q14151 953 aaKnown RBP eCLIP24.02■■□□□ 1.44
SREBF1-204ENST00000395756 CDCA8Q53HL2 280 aa24.02■■□□□ 1.44
SREBF1-204ENST00000395756 B4GALNT3Q6L9W6 998 aa24.02■■□□□ 1.44
SREBF1-204ENST00000395756 NUDCQ9Y266 331 aa24■■□□□ 1.43
SREBF1-204ENST00000395756 EFCAB6Q5THR3 1501 aa24■■□□□ 1.43
SREBF1-204ENST00000395756 PPRC1Q5VV67 1664 aaKnown RBP23.99■■□□□ 1.43
SREBF1-204ENST00000395756 IDI1Q13907 227 aa23.99■■□□□ 1.43
SREBF1-204ENST00000395756 FRMPD1Q5SYB0 1578 aa23.99■■□□□ 1.43
SREBF1-204ENST00000395756 FBXO31Q5XUX0 539 aaPredicted RBP23.97■■□□□ 1.43
SREBF1-204ENST00000395756 EIF3AQ14152 1382 aaKnown RBP23.97■■□□□ 1.43
SREBF1-204ENST00000395756 CEP152O94986 1710 aa23.97■■□□□ 1.43
SREBF1-204ENST00000395756 STK26Q9P289 416 aa23.96■■□□□ 1.43
SREBF1-204ENST00000395756 HECW2Q9P2P5 1572 aa23.96■■□□□ 1.43
SREBF1-204ENST00000395756 CDCA7LQ96GN5 454 aa23.94■■□□□ 1.42
SREBF1-204ENST00000395756 RNF17Q9BXT8 1623 aaKnown RBP23.94■■□□□ 1.42
SREBF1-204ENST00000395756 NEO1Q92859 1461 aa23.94■■□□□ 1.42
SREBF1-204ENST00000395756 TNNT2P45379 298 aaPredicted RBP23.94■■□□□ 1.42
SREBF1-204ENST00000395756 AMER1Q5JTC6 1135 aaPredicted RBP23.94■■□□□ 1.42
SREBF1-204ENST00000395756 LRPPRCP42704 1394 aaKnown RBP23.93■■□□□ 1.42
SREBF1-204ENST00000395756 ABCA6Q8N139 1617 aa23.93■■□□□ 1.42
SREBF1-204ENST00000395756 PPP2R1AP30153 589 aa23.93■■□□□ 1.42
SREBF1-204ENST00000395756 ADAMTS8Q9UP79 889 aa23.93■■□□□ 1.42
SREBF1-204ENST00000395756 CENPJQ9HC77 1338 aaPredicted RBP23.91■■□□□ 1.42
SREBF1-204ENST00000395756 PPP4R2Q9NY27 417 aa23.91■■□□□ 1.42
SREBF1-204ENST00000395756 LAMC1P11047 1609 aa23.9■■□□□ 1.42
SREBF1-204ENST00000395756 C14orf93Q9H972 538 aaKnown RBP23.9■■□□□ 1.42
SREBF1-204ENST00000395756 STAG3Q9UJ98 1225 aa23.9■■□□□ 1.42
SREBF1-204ENST00000395756 SLC12A5Q9H2X9 1139 aa23.89■■□□□ 1.42
SREBF1-204ENST00000395756 CFAP74Q9C0B2 1584 aa23.89■■□□□ 1.42
SREBF1-204ENST00000395756 SMG6Q86US8 1419 aaKnown RBP23.89■■□□□ 1.42
SREBF1-204ENST00000395756 CARD14Q9BXL6 1004 aa23.89■■□□□ 1.41
SREBF1-204ENST00000395756 WDR43Q15061 677 aaKnown RBP eCLIP23.88■■□□□ 1.41
SREBF1-204ENST00000395756 ABCC3O15438 1527 aa23.87■■□□□ 1.41
SREBF1-204ENST00000395756 VGFO15240 615 aaPredicted RBP23.86■■□□□ 1.41
SREBF1-204ENST00000395756 LMTK2Q8IWU2 1503 aa23.86■■□□□ 1.41
SREBF1-204ENST00000395756 MAP3K4Q9Y6R4 1608 aa23.85■■□□□ 1.41
SREBF1-204ENST00000395756 CCDC146Q8IYE0 955 aa23.85■■□□□ 1.41
SREBF1-204ENST00000395756 MROH2AA6NES4 1674 aa23.85■■□□□ 1.41
SREBF1-204ENST00000395756 KIF1BO60333 1816 aa23.84■■□□□ 1.41
SREBF1-204ENST00000395756 MYOM2P54296 1465 aa23.83■■□□□ 1.4
SREBF1-204ENST00000395756 IQGAP1P46940 1657 aa23.82■■□□□ 1.4
SREBF1-204ENST00000395756 DIP2CQ9Y2E4 1556 aa23.82■■□□□ 1.4
SREBF1-204ENST00000395756 RIMBP3CA6NJZ7 1639 aa23.82■■□□□ 1.4
SREBF1-204ENST00000395756 RIMBP3BA6NNM3 1639 aa23.82■■□□□ 1.4
SREBF1-204ENST00000395756 RIMBP3Q9UFD9 1639 aa23.82■■□□□ 1.4
SREBF1-204ENST00000395756 TSPOAP1O95153 1857 aa23.8■■□□□ 1.4
SREBF1-204ENST00000395756 ERVK-7P63135 1459 aa23.8■■□□□ 1.4
SREBF1-204ENST00000395756 CABP2Q9NPB3 220 aa23.8■■□□□ 1.4
SREBF1-204ENST00000395756 RPGRIP1LQ68CZ1 1315 aa23.79■■□□□ 1.4
SREBF1-204ENST00000395756 ADGRB3O60242 1522 aa23.78■■□□□ 1.4
SREBF1-204ENST00000395756 SLC52A1Q9NWF4 448 aa23.78■■□□□ 1.4
SREBF1-204ENST00000395756 RCAN3Q9UKA8 241 aa23.78■■□□□ 1.4
SREBF1-204ENST00000395756 RBM19Q9Y4C8 960 aaKnown RBP23.78■■□□□ 1.4
SREBF1-204ENST00000395756 PIK3C2GO75747 1445 aa23.77■■□□□ 1.4
SREBF1-204ENST00000395756 PLIN1O60240 522 aa23.76■■□□□ 1.39
SREBF1-204ENST00000395756 SLC24A1O60721 1099 aa23.76■■□□□ 1.39
SREBF1-204ENST00000395756 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
SREBF1-204ENST00000395756 CCDC136Q96JN2 1154 aa23.76■■□□□ 1.39
SREBF1-204ENST00000395756 ERICH6BQ5W0A0 696 aa23.75■■□□□ 1.39
SREBF1-204ENST00000395756 SRPK2P78362 688 aaKnown RBP23.73■■□□□ 1.39
SREBF1-204ENST00000395756 ANO8Q9HCE9 1232 aaPredicted RBP23.73■■□□□ 1.39
SREBF1-204ENST00000395756 MINK1Q8N4C8 1332 aaPredicted RBP23.73■■□□□ 1.39
SREBF1-204ENST00000395756 MORC1Q86VD1 984 aa23.73■■□□□ 1.39
SREBF1-204ENST00000395756 ASXL1Q8IXJ9 1541 aa23.72■■□□□ 1.39
SREBF1-204ENST00000395756 NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
SREBF1-204ENST00000395756 POGKQ9P215 609 aa23.72■■□□□ 1.39
SREBF1-204ENST00000395756 SIGLEC1Q9BZZ2 1709 aa23.71■■□□□ 1.39
SREBF1-204ENST00000395756 ESF1Q9H501 851 aaKnown RBP23.71■■□□□ 1.39
SREBF1-204ENST00000395756 CAMSAP1Q5T5Y3 1602 aa23.71■■□□□ 1.39
SREBF1-204ENST00000395756 RICTORQ6R327 1708 aa23.71■■□□□ 1.39
SREBF1-204ENST00000395756 SYNMO15061 1565 aa23.69■■□□□ 1.38
SREBF1-204ENST00000395756 APAF1O14727 1248 aa23.69■■□□□ 1.38
SREBF1-204ENST00000395756 RRP1P56182 461 aaKnown RBP23.69■■□□□ 1.38
SREBF1-204ENST00000395756 PRAM1Q96QH2 718 aa23.69■■□□□ 1.38
SREBF1-204ENST00000395756 EXOC6Q8TAG9 804 aa23.68■■□□□ 1.38
SREBF1-204ENST00000395756 NSD3Q9BZ95 1437 aa23.68■■□□□ 1.38
SREBF1-204ENST00000395756 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
SREBF1-204ENST00000395756 PDE3BQ13370 1112 aa23.68■■□□□ 1.38
SREBF1-204ENST00000395756 EVC2Q86UK5 1308 aa23.67■■□□□ 1.38
SREBF1-204ENST00000395756 NEURL4Q96JN8 1562 aa23.66■■□□□ 1.38
SREBF1-204ENST00000395756 RNF123Q5XPI4 1314 aa23.66■■□□□ 1.38
SREBF1-204ENST00000395756 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
SREBF1-204ENST00000395756 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.38
SREBF1-204ENST00000395756 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.38
SREBF1-204ENST00000395756 PLEKHH1Q9ULM0 1364 aa23.64■■□□□ 1.38
SREBF1-204ENST00000395756 ARHGAP31Q2M1Z3 1444 aa23.63■■□□□ 1.37
SREBF1-204ENST00000395756 ADGRB1O14514 1584 aa23.63■■□□□ 1.37
SREBF1-204ENST00000395756 IFT172Q9UG01 1749 aa23.63■■□□□ 1.37
SREBF1-204ENST00000395756 BLMP54132 1417 aaPredicted RBP23.62■■□□□ 1.37
SREBF1-204ENST00000395756 GLI2P10070 1586 aa23.61■■□□□ 1.37
SREBF1-204ENST00000395756 WAPLQ7Z5K2 1190 aa23.61■■□□□ 1.37
SREBF1-204ENST00000395756 RRP7AQ9Y3A4 280 aaKnown RBP23.61■■□□□ 1.37
SREBF1-204ENST00000395756 PPLO60437 1756 aa23.6■■□□□ 1.37
SREBF1-204ENST00000395756 SBNO2Q9Y2G9 1366 aa23.6■■□□□ 1.37
SREBF1-204ENST00000395756 MTHFSP49914 203 aa23.6■■□□□ 1.37
SREBF1-204ENST00000395756 MYOM1P52179 1685 aa23.6■■□□□ 1.37
SREBF1-204ENST00000395756 NEXMIFQ5QGS0 1516 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms