RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 INTS3Q68E01 1043 aaKnown RBP20.71■□□□□ 0.91
SREBF1-203ENST00000395751 CALRP27797 417 aaKnown RBP20.71■□□□□ 0.91
SREBF1-203ENST00000395751 XRCC6P12956 609 aaKnown RBP eCLIP20.7■□□□□ 0.92e-7■■■□□ 15.7
SREBF1-203ENST00000395751 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-203ENST00000395751 CGNQ9P2M7 1197 aaKnown RBP20.69■□□□□ 0.9
SREBF1-203ENST00000395751 TSPYL1Q9H0U9 437 aa20.69■□□□□ 0.9
SREBF1-203ENST00000395751 ESF1Q9H501 851 aaKnown RBP20.69■□□□□ 0.9
SREBF1-203ENST00000395751 ADAMTS8Q9UP79 889 aa20.69■□□□□ 0.9
SREBF1-203ENST00000395751 CCDC112Q8NEF3 446 aa20.69■□□□□ 0.9
SREBF1-203ENST00000395751 XPCQ01831 940 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-203ENST00000395751 HSP90B2PQ58FF3 399 aa20.68■□□□□ 0.9
SREBF1-203ENST00000395751 CCDC34Q96HJ3 373 aa20.68■□□□□ 0.9
SREBF1-203ENST00000395751 HSP90B1P14625 803 aaKnown RBP20.68■□□□□ 0.9
SREBF1-203ENST00000395751 CDC45O75419 566 aa20.68■□□□□ 0.9
SREBF1-203ENST00000395751 SF3A1Q15459 793 aaKnown RBP20.67■□□□□ 0.9
SREBF1-203ENST00000395751 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-203ENST00000395751 KIF21BO75037 1637 aa20.67■□□□□ 0.9
SREBF1-203ENST00000395751 RABEP1Q15276 862 aa20.67■□□□□ 0.9
SREBF1-203ENST00000395751 CHMP3Q9Y3E7 222 aa20.67■□□□□ 0.9
SREBF1-203ENST00000395751 BCL11BQ9C0K0 894 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-203ENST00000395751 K7ELQ4 463 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-203ENST00000395751 SRPK2P78362 688 aaKnown RBP20.66■□□□□ 0.9
SREBF1-203ENST00000395751 ACBD3Q9H3P7 528 aa20.66■□□□□ 0.9
SREBF1-203ENST00000395751 CWC22Q9HCG8 908 aaKnown RBP20.66■□□□□ 0.9
SREBF1-203ENST00000395751 RILPL2Q969X0 211 aa20.66■□□□□ 0.9
SREBF1-203ENST00000395751 NACADO15069 1562 aa20.66■□□□□ 0.9
SREBF1-203ENST00000395751 MCM5P33992 734 aa20.65■□□□□ 0.9
SREBF1-203ENST00000395751 MPNDQ8N594 471 aa20.64■□□□□ 0.89
SREBF1-203ENST00000395751 TRIM5Q9C035 493 aa20.64■□□□□ 0.89
SREBF1-203ENST00000395751 FHOD3Q2V2M9 1422 aa20.63■□□□□ 0.89
SREBF1-203ENST00000395751 H3BQV1 296 aa20.63■□□□□ 0.89
SREBF1-203ENST00000395751 IFFO2Q5TF58 517 aa20.63■□□□□ 0.89
SREBF1-203ENST00000395751 BICD2Q8TD16 824 aa20.63■□□□□ 0.89
SREBF1-203ENST00000395751 CALCOCO1Q9P1Z2 691 aa20.63■□□□□ 0.89
SREBF1-203ENST00000395751 LEKR1Q6ZMV7 388 aa20.63■□□□□ 0.89
SREBF1-203ENST00000395751 SKAP1Q86WV1 359 aa20.63■□□□□ 0.89
SREBF1-203ENST00000395751 WIZO95785 1651 aa20.62■□□□□ 0.89
SREBF1-203ENST00000395751 AK7Q96M32 723 aa20.62■□□□□ 0.89
SREBF1-203ENST00000395751 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
SREBF1-203ENST00000395751 SMC3Q9UQE7 1217 aa20.62■□□□□ 0.89
SREBF1-203ENST00000395751 FAM184AQ8NB25 1140 aa20.61■□□□□ 0.89
SREBF1-203ENST00000395751 ERICH4A6NGS2 130 aa20.61■□□□□ 0.89
SREBF1-203ENST00000395751 RTF1Q92541 710 aaKnown RBP20.61■□□□□ 0.89
SREBF1-203ENST00000395751 GPATCH3Q96I76 525 aa20.61■□□□□ 0.89
SREBF1-203ENST00000395751 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
SREBF1-203ENST00000395751 PANK2Q9BZ23 570 aa20.6■□□□□ 0.89
SREBF1-203ENST00000395751 SLC4A10Q6U841 1118 aa20.6■□□□□ 0.89
SREBF1-203ENST00000395751 STK31Q9BXU1 1019 aa20.6■□□□□ 0.89
SREBF1-203ENST00000395751 ANO2Q9NQ90 1003 aa20.6■□□□□ 0.89
SREBF1-203ENST00000395751 RRAGDQ9NQL2 400 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-203ENST00000395751 MCM2P49736 904 aa20.59■□□□□ 0.89
SREBF1-203ENST00000395751 CCDC70Q6NSX1 233 aa20.59■□□□□ 0.89
SREBF1-203ENST00000395751 SPC24Q8NBT2 197 aa20.59■□□□□ 0.89
SREBF1-203ENST00000395751 VPS37CA5D8V6 355 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-203ENST00000395751 NPHP1O15259 732 aa20.58■□□□□ 0.89
SREBF1-203ENST00000395751 BCAR3O75815 825 aa20.58■□□□□ 0.89
SREBF1-203ENST00000395751 NINLQ9Y2I6 1382 aa20.57■□□□□ 0.88
SREBF1-203ENST00000395751 LMOD3Q0VAK6 560 aa20.57■□□□□ 0.88
SREBF1-203ENST00000395751 RUNDC1Q96C34 613 aa20.57■□□□□ 0.88
SREBF1-203ENST00000395751 PPP4R3BQ5MIZ7 849 aa20.57■□□□□ 0.88
SREBF1-203ENST00000395751 DEF6Q9H4E7 631 aa20.57■□□□□ 0.88
SREBF1-203ENST00000395751 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
SREBF1-203ENST00000395751 H0YHG0 523 aa20.56■□□□□ 0.88
SREBF1-203ENST00000395751 MIA2Q96PC5 1412 aa20.55■□□□□ 0.88
SREBF1-203ENST00000395751 FGD6Q6ZV73 1430 aa20.55■□□□□ 0.88
SREBF1-203ENST00000395751 RDXP35241 583 aaKnown RBP20.55■□□□□ 0.88
SREBF1-203ENST00000395751 ELL2O00472 640 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-203ENST00000395751 SMAP1Q8IYB5 467 aaPredicted RBP20.54■□□□□ 0.88
SREBF1-203ENST00000395751 AEBP1Q8IUX7 1158 aa20.54■□□□□ 0.88
SREBF1-203ENST00000395751 PRIMPOLQ96LW4 560 aa20.54■□□□□ 0.88
SREBF1-203ENST00000395751 TPM1P09493 284 aa20.54■□□□□ 0.88
SREBF1-203ENST00000395751 NEK4P51957 841 aa20.54■□□□□ 0.88
SREBF1-203ENST00000395751 GTPBP4Q9BZE4 634 aaKnown RBP20.54■□□□□ 0.88
SREBF1-203ENST00000395751 API5Q9BZZ5 524 aaKnown RBP20.53■□□□□ 0.88
SREBF1-203ENST00000395751 SYCE3A1L190 88 aa20.52■□□□□ 0.88
SREBF1-203ENST00000395751 ZKSCAN1P17029 563 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-203ENST00000395751 TNPO1Q92973 898 aaKnown RBP20.52■□□□□ 0.88
SREBF1-203ENST00000395751 OFD1O75665 1012 aa20.52■□□□□ 0.88
SREBF1-203ENST00000395751 SAFB2Q14151 953 aaKnown RBP eCLIP20.52■□□□□ 0.88
SREBF1-203ENST00000395751 CCDC192P0DO97 292 aa20.51■□□□□ 0.87
SREBF1-203ENST00000395751 CHMP4CQ96CF2 233 aa20.51■□□□□ 0.87
SREBF1-203ENST00000395751 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
SREBF1-203ENST00000395751 KANK1Q14678 1352 aa20.5■□□□□ 0.87
SREBF1-203ENST00000395751 HDAC5Q9UQL6 1122 aa20.5■□□□□ 0.87
SREBF1-203ENST00000395751 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
SREBF1-203ENST00000395751 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
SREBF1-203ENST00000395751 ERCC4Q92889 916 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-203ENST00000395751 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.5■□□□□ 0.87
SREBF1-203ENST00000395751 TSR1Q2NL82 804 aaKnown RBP20.5■□□□□ 0.87
SREBF1-203ENST00000395751 CCDC73Q6ZRK6 1079 aa20.5■□□□□ 0.87
SREBF1-203ENST00000395751 RUFY2Q8WXA3 655 aa20.5■□□□□ 0.87
SREBF1-203ENST00000395751 NBPF1Q3BBV0 1214 aa20.49■□□□□ 0.87
SREBF1-203ENST00000395751 TIGD1Q96MW7 591 aa20.49■□□□□ 0.87
SREBF1-203ENST00000395751 NAT10Q9H0A0 1025 aaKnown RBP20.49■□□□□ 0.87
SREBF1-203ENST00000395751 CCP110O43303 1012 aa20.48■□□□□ 0.87
SREBF1-203ENST00000395751 NBPF8Q3BBV2 869 aa20.48■□□□□ 0.87
SREBF1-203ENST00000395751 USP8P40818 1118 aa20.48■□□□□ 0.87
SREBF1-203ENST00000395751 GORABQ5T7V8 394 aa20.48■□□□□ 0.87
SREBF1-203ENST00000395751 C20orf194Q5TEA3 1177 aa20.48■□□□□ 0.87
SREBF1-203ENST00000395751 CHMP4AQ9BY43 222 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms