RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 RIC3Q7Z5B4 369 aa10.67□□□□□ -0.7
CDKN3-203ENST00000395577 ARID3CA6NKF2 412 aa10.66□□□□□ -0.7
CDKN3-203ENST00000395577 C1orf115Q9H7X2 142 aa10.66□□□□□ -0.7
CDKN3-203ENST00000395577 APBB1O00213 710 aa10.65□□□□□ -0.7
CDKN3-203ENST00000395577 RFC5P40937 340 aa10.65□□□□□ -0.7
CDKN3-203ENST00000395577 ARID3AQ99856 593 aa10.65□□□□□ -0.7
CDKN3-203ENST00000395577 SPTLC1O15269 473 aa10.64□□□□□ -0.71
CDKN3-203ENST00000395577 TRAK2O60296 914 aa10.64□□□□□ -0.71
CDKN3-203ENST00000395577 RDH13Q8NBN7 331 aa10.64□□□□□ -0.71
CDKN3-203ENST00000395577 KIAA1468Q9P260 1216 aa10.64□□□□□ -0.71
CDKN3-203ENST00000395577 SPDYE5A6NIY4 337 aa10.63□□□□□ -0.71
CDKN3-203ENST00000395577 RSBN1LQ6PCB5 846 aaPredicted RBP10.63□□□□□ -0.71
CDKN3-203ENST00000395577 BANK1Q8NDB2 785 aa10.63□□□□□ -0.71
CDKN3-203ENST00000395577 ZBED2Q9BTP6 218 aa10.63□□□□□ -0.71
CDKN3-203ENST00000395577 MOXD2PA6NHM9 499 aa10.62□□□□□ -0.71
CDKN3-203ENST00000395577 RAD21O60216 631 aa10.62□□□□□ -0.71
CDKN3-203ENST00000395577 TUSC1Q2TAM9 212 aa10.62□□□□□ -0.71
CDKN3-203ENST00000395577 TMEM259Q4ZIN3 620 aa10.62□□□□□ -0.71
CDKN3-203ENST00000395577 FBXO31Q5XUX0 539 aaPredicted RBP10.62□□□□□ -0.71
CDKN3-203ENST00000395577 PPP2R2DQ66LE6 453 aa10.62□□□□□ -0.71
CDKN3-203ENST00000395577 PSEN2P49810 448 aa10.61□□□□□ -0.71
CDKN3-203ENST00000395577 CSPP1Q1MSJ5 1256 aa10.61□□□□□ -0.71
CDKN3-203ENST00000395577 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
CDKN3-203ENST00000395577 NDUFV2P19404 249 aa10.6□□□□□ -0.71
CDKN3-203ENST00000395577 SNRKQ9NRH2 765 aa10.6□□□□□ -0.71
CDKN3-203ENST00000395577 RSPH4AQ5TD94 716 aa10.59□□□□□ -0.71
CDKN3-203ENST00000395577 PROSER2Q86WR7 435 aaPredicted RBP10.59□□□□□ -0.71
CDKN3-203ENST00000395577 POM121Q96HA1 1249 aa10.59□□□□□ -0.71
CDKN3-203ENST00000395577 ERBB3P21860 1342 aa10.58□□□□□ -0.71
CDKN3-203ENST00000395577 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
CDKN3-203ENST00000395577 KDM4AO75164 1064 aa10.58□□□□□ -0.72
CDKN3-203ENST00000395577 GJA5P36382 358 aa10.58□□□□□ -0.72
CDKN3-203ENST00000395577 RABGEF1Q9UJ41 708 aa10.58□□□□□ -0.72
CDKN3-203ENST00000395577 VARS2Q5ST30 1063 aaKnown RBP10.57□□□□□ -0.72
CDKN3-203ENST00000395577 PCDHB15Q9Y5E8 787 aa10.57□□□□□ -0.72
CDKN3-203ENST00000395577 GCGRP47871 477 aa10.56□□□□□ -0.72
CDKN3-203ENST00000395577 QPCTQ16769 361 aa10.56□□□□□ -0.72
CDKN3-203ENST00000395577 SWT1Q5T5J6 900 aaKnown RBP10.56□□□□□ -0.72
CDKN3-203ENST00000395577 SEPT9Q9UHD8 586 aaPredicted RBP10.56□□□□□ -0.72
CDKN3-203ENST00000395577 COG6Q9Y2V7 657 aa10.56□□□□□ -0.72
CDKN3-203ENST00000395577 LILRB3O75022 631 aa10.55□□□□□ -0.72
CDKN3-203ENST00000395577 USP46P62068 366 aa10.55□□□□□ -0.72
CDKN3-203ENST00000395577 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
CDKN3-203ENST00000395577 NUTM2BA6NNL0 878 aaPredicted RBP10.54□□□□□ -0.72
CDKN3-203ENST00000395577 NUTM2EB1AL46 878 aaPredicted RBP10.54□□□□□ -0.72
CDKN3-203ENST00000395577 HDGFP51858 240 aaKnown RBP10.54□□□□□ -0.72
CDKN3-203ENST00000395577 NUTM2DQ5VT03 806 aaPredicted RBP10.54□□□□□ -0.72
CDKN3-203ENST00000395577 POTEEQ6S8J3 1075 aa10.54□□□□□ -0.72
CDKN3-203ENST00000395577 NUTM2AQ8IVF1 878 aaPredicted RBP10.54□□□□□ -0.72
CDKN3-203ENST00000395577 AXIN2Q9Y2T1 843 aa10.54□□□□□ -0.72
CDKN3-203ENST00000395577 SLC10A3P09131 477 aa10.53□□□□□ -0.72
CDKN3-203ENST00000395577 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
CDKN3-203ENST00000395577 FNBP4Q8N3X1 1017 aaPredicted RBP10.53□□□□□ -0.72
CDKN3-203ENST00000395577 ZNF777Q9ULD5 760 aaPredicted RBP10.53□□□□□ -0.72
CDKN3-203ENST00000395577 HOXA2O43364 376 aa10.52□□□□□ -0.73
CDKN3-203ENST00000395577 AP1G2O75843 785 aa10.52□□□□□ -0.73
CDKN3-203ENST00000395577 RTL5Q5HYW3 569 aaPredicted RBP10.52□□□□□ -0.73
CDKN3-203ENST00000395577 CABLES1Q8TDN4 633 aa10.52□□□□□ -0.73
CDKN3-203ENST00000395577 FDX1P10109 184 aa10.51□□□□□ -0.73
CDKN3-203ENST00000395577 PBX2P40425 430 aa10.51□□□□□ -0.73
CDKN3-203ENST00000395577 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
CDKN3-203ENST00000395577 PRPF38BQ5VTL8 546 aaKnown RBP10.51□□□□□ -0.73
CDKN3-203ENST00000395577 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
CDKN3-203ENST00000395577 MTMR14Q8NCE2 650 aa10.51□□□□□ -0.73
CDKN3-203ENST00000395577 FAM98CQ17RN3 349 aaKnown RBP10.5□□□□□ -0.73
CDKN3-203ENST00000395577 ZBTB3Q9H5J0 574 aa10.5□□□□□ -0.73
CDKN3-203ENST00000395577 HRCP23327 699 aa10.49□□□□□ -0.73
CDKN3-203ENST00000395577 EMP3P54852 163 aa10.49□□□□□ -0.73
CDKN3-203ENST00000395577 VPS9D1Q9Y2B5 631 aa10.49□□□□□ -0.73
CDKN3-203ENST00000395577 ST18O60284 1047 aa10.48□□□□□ -0.73
CDKN3-203ENST00000395577 SLF2Q8IX21 1173 aa10.48□□□□□ -0.73
CDKN3-203ENST00000395577 GDPD2Q9HCC8 539 aa10.48□□□□□ -0.73
CDKN3-203ENST00000395577 SOCS7O14512 581 aa10.47□□□□□ -0.73
CDKN3-203ENST00000395577 GUCA2AQ02747 115 aa10.47□□□□□ -0.73
CDKN3-203ENST00000395577 LHX8Q68G74 356 aa10.47□□□□□ -0.73
CDKN3-203ENST00000395577 ZNF687Q8N1G0 1237 aa10.47□□□□□ -0.73
CDKN3-203ENST00000395577 MARVELD3Q96A59 401 aa10.47□□□□□ -0.73
CDKN3-203ENST00000395577 PRM3Q9NNZ6 103 aa10.47□□□□□ -0.73
CDKN3-203ENST00000395577 USP17L8P0C7I0 530 aa10.46□□□□□ -0.73
CDKN3-203ENST00000395577 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.73
CDKN3-203ENST00000395577 LAPTM4BQ86VI4 370 aa10.46□□□□□ -0.73
CDKN3-203ENST00000395577 HLA-CQ95604 372 aa10.46□□□□□ -0.73
CDKN3-203ENST00000395577 PCDHGC3Q9UN70 934 aa10.46□□□□□ -0.73
CDKN3-203ENST00000395577 ZNF330Q9Y3S2 320 aaPredicted RBP10.46□□□□□ -0.73
CDKN3-203ENST00000395577 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
CDKN3-203ENST00000395577 NBPF3Q9H094 633 aa10.45□□□□□ -0.74
CDKN3-203ENST00000395577 GRIPAP1Q4V328 841 aa10.44□□□□□ -0.74
CDKN3-203ENST00000395577 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
CDKN3-203ENST00000395577 RNF40O75150 1001 aa10.43□□□□□ -0.74
CDKN3-203ENST00000395577 CFHP08603 1231 aa10.43□□□□□ -0.74
CDKN3-203ENST00000395577 ABL2P42684 1182 aa10.43□□□□□ -0.74
CDKN3-203ENST00000395577 FUT2Q10981 343 aa10.43□□□□□ -0.74
CDKN3-203ENST00000395577 MTMR2Q13614 643 aa10.43□□□□□ -0.74
CDKN3-203ENST00000395577 CCDC97Q96F63 343 aaPredicted RBP10.43□□□□□ -0.74
CDKN3-203ENST00000395577 SERPINA10Q9UK55 444 aa10.42□□□□□ -0.74
CDKN3-203ENST00000395577 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
CDKN3-203ENST00000395577 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
CDKN3-203ENST00000395577 PLSCR2Q9NRY7 297 aa10.41□□□□□ -0.74
CDKN3-203ENST00000395577 C6orf229H3BNL8 230 aa10.4□□□□□ -0.74
CDKN3-203ENST00000395577 CTDSPL2Q05D32 466 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms