RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ZEB1P37275 1124 aaPredicted RBP12.37□□□□□ -0.43
HERC4-203ENST00000395185 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
HERC4-203ENST00000395185 RPRD2Q5VT52 1461 aaKnown RBP12.37□□□□□ -0.43
HERC4-203ENST00000395185 UGGT1Q9NYU2 1555 aa12.37□□□□□ -0.43
HERC4-203ENST00000395185 DEPDC5O75140 1603 aa12.37□□□□□ -0.43
HERC4-203ENST00000395185 MROH1Q8NDA8 1641 aa12.37□□□□□ -0.43
HERC4-203ENST00000395185 ZC3H13Q5T200 1668 aaKnown RBP12.36□□□□□ -0.43
HERC4-203ENST00000395185 SPATA31D1Q6ZQQ2 1576 aa12.36□□□□□ -0.43
HERC4-203ENST00000395185 PPP1R15AO75807 674 aaPredicted RBP12.36□□□□□ -0.43
HERC4-203ENST00000395185 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
HERC4-203ENST00000395185 NOS1P29475 1434 aa12.36□□□□□ -0.43
HERC4-203ENST00000395185 LTKP29376 864 aa12.35□□□□□ -0.43
HERC4-203ENST00000395185 TIMELESSQ9UNS1 1208 aa12.35□□□□□ -0.43
HERC4-203ENST00000395185 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
HERC4-203ENST00000395185 IQGAP3Q86VI3 1631 aa12.33□□□□□ -0.43
HERC4-203ENST00000395185 ZNF326Q5BKZ1 582 aaKnown RBP12.33□□□□□ -0.44
HERC4-203ENST00000395185 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
HERC4-203ENST00000395185 NPHP4O75161 1426 aaPredicted RBP12.33□□□□□ -0.44
HERC4-203ENST00000395185 ZNF335Q9H4Z2 1342 aaPredicted RBP12.33□□□□□ -0.44
HERC4-203ENST00000395185 DSG3P32926 999 aa12.32□□□□□ -0.44
HERC4-203ENST00000395185 SIN3AQ96ST3 1273 aa12.32□□□□□ -0.44
HERC4-203ENST00000395185 MYO3AQ8NEV4 1616 aa12.32□□□□□ -0.44
HERC4-203ENST00000395185 EFCAB6Q5THR3 1501 aa12.3□□□□□ -0.44
HERC4-203ENST00000395185 SCAF11Q99590 1463 aaKnown RBP12.29□□□□□ -0.44
HERC4-203ENST00000395185 MED14O60244 1454 aa12.28□□□□□ -0.44
HERC4-203ENST00000395185 SLC26A8Q96RN1 970 aa12.28□□□□□ -0.44
HERC4-203ENST00000395185 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
HERC4-203ENST00000395185 CEP152O94986 1710 aa12.28□□□□□ -0.44
HERC4-203ENST00000395185 UBAP1LF5GYI3 381 aa12.27□□□□□ -0.45
HERC4-203ENST00000395185 TOM1O60784 492 aa12.27□□□□□ -0.45
HERC4-203ENST00000395185 TBX22Q9Y458 520 aa12.27□□□□□ -0.45
HERC4-203ENST00000395185 STRCQ7RTU9 1775 aa12.27□□□□□ -0.45
HERC4-203ENST00000395185 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
HERC4-203ENST00000395185 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
HERC4-203ENST00000395185 KCNA6P17658 529 aa12.26□□□□□ -0.45
HERC4-203ENST00000395185 NUTM2DQ5VT03 806 aaPredicted RBP12.26□□□□□ -0.45
HERC4-203ENST00000395185 ARHGAP23Q9P227 1491 aa12.26□□□□□ -0.45
HERC4-203ENST00000395185 RPGRIP1LQ68CZ1 1315 aa12.25□□□□□ -0.45
HERC4-203ENST00000395185 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
HERC4-203ENST00000395185 SLIT1O75093 1534 aa12.25□□□□□ -0.45
HERC4-203ENST00000395185 TET3O43151 1660 aa12.25□□□□□ -0.45
HERC4-203ENST00000395185 PROSER2Q86WR7 435 aaPredicted RBP12.24□□□□□ -0.45
HERC4-203ENST00000395185 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
HERC4-203ENST00000395185 PLEKHG1Q9ULL1 1385 aa12.22□□□□□ -0.45
HERC4-203ENST00000395185 RGL3Q3MIN7 710 aa12.22□□□□□ -0.45
HERC4-203ENST00000395185 CFAP65Q6ZU64 1925 aaKnown RBP12.21□□□□□ -0.45
HERC4-203ENST00000395185 ABCB7O75027 752 aa12.21□□□□□ -0.45
HERC4-203ENST00000395185 L3MBTL2Q969R5 705 aa12.21□□□□□ -0.45
HERC4-203ENST00000395185 E9PCH4 1651 aa12.21□□□□□ -0.45
HERC4-203ENST00000395185 SYNMO15061 1565 aa12.21□□□□□ -0.46
HERC4-203ENST00000395185 IQSEC2Q5JU85 1478 aa12.21□□□□□ -0.46
HERC4-203ENST00000395185 DISP3Q9P2K9 1392 aa12.2□□□□□ -0.46
HERC4-203ENST00000395185 ADGRB3O60242 1522 aa12.2□□□□□ -0.46
HERC4-203ENST00000395185 CPS1P31327 1500 aa12.2□□□□□ -0.46
HERC4-203ENST00000395185 SPATA31E1Q6ZUB1 1445 aa12.2□□□□□ -0.46
HERC4-203ENST00000395185 PIK3C2BO00750 1634 aa12.19□□□□□ -0.46
HERC4-203ENST00000395185 PIP4K2BP78356 416 aa12.19□□□□□ -0.46
HERC4-203ENST00000395185 C14orf37Q86TY3 774 aa12.19□□□□□ -0.46
HERC4-203ENST00000395185 TRPM2O94759 1503 aa12.19□□□□□ -0.46
HERC4-203ENST00000395185 CCDC144AA2RUR9 1427 aa12.19□□□□□ -0.46
HERC4-203ENST00000395185 LTBP4Q8N2S1 1624 aa12.19□□□□□ -0.46
HERC4-203ENST00000395185 UBR1Q8IWV7 1749 aa12.18□□□□□ -0.46
HERC4-203ENST00000395185 POLA2Q14181 598 aa12.18□□□□□ -0.46
HERC4-203ENST00000395185 ZFYVE9O95405 1425 aa12.18□□□□□ -0.46
HERC4-203ENST00000395185 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
HERC4-203ENST00000395185 AMOTL2Q9Y2J4 779 aa12.17□□□□□ -0.46
HERC4-203ENST00000395185 NEURL4Q96JN8 1562 aa12.17□□□□□ -0.46
HERC4-203ENST00000395185 TONSLQ96HA7 1378 aa12.17□□□□□ -0.46
HERC4-203ENST00000395185 PIK3R4Q99570 1358 aa12.16□□□□□ -0.46
HERC4-203ENST00000395185 KDM5AP29375 1690 aaKnown RBP12.16□□□□□ -0.46
HERC4-203ENST00000395185 IQGAP1P46940 1657 aa12.13□□□□□ -0.47
HERC4-203ENST00000395185 TMEM131LA2VDJ0 1609 aa12.13□□□□□ -0.47
HERC4-203ENST00000395185 ATF3P18847 181 aa12.13□□□□□ -0.47
HERC4-203ENST00000395185 RBM33Q96EV2 1170 aaKnown RBP12.13□□□□□ -0.47
HERC4-203ENST00000395185 TMEM94Q12767 1356 aa12.13□□□□□ -0.47
HERC4-203ENST00000395185 NBPF8Q3BBV2 869 aa12.12□□□□□ -0.47
HERC4-203ENST00000395185 C19orf44Q9H6X5 657 aa12.12□□□□□ -0.47
HERC4-203ENST00000395185 CLTCL1P53675 1640 aa12.11□□□□□ -0.47
HERC4-203ENST00000395185 MSH6P52701 1360 aa12.11□□□□□ -0.47
HERC4-203ENST00000395185 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
HERC4-203ENST00000395185 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
HERC4-203ENST00000395185 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
HERC4-203ENST00000395185 LRRC7Q96NW7 1537 aa12.11□□□□□ -0.47
HERC4-203ENST00000395185 SLAIN2Q9P270 581 aa12.1□□□□□ -0.47
HERC4-203ENST00000395185 ADAMTS13Q76LX8 1427 aa12.1□□□□□ -0.47
HERC4-203ENST00000395185 NCOA3Q9Y6Q9 1424 aa12.1□□□□□ -0.47
HERC4-203ENST00000395185 DCAF11Q8TEB1 546 aa12.09□□□□□ -0.47
HERC4-203ENST00000395185 KDM2AQ9Y2K7 1162 aa12.09□□□□□ -0.47
HERC4-203ENST00000395185 ADGRF5Q8IZF2 1346 aa12.08□□□□□ -0.48
HERC4-203ENST00000395185 METP08581 1390 aa12.07□□□□□ -0.48
HERC4-203ENST00000395185 HSPA1LP34931 641 aa12.07□□□□□ -0.48
HERC4-203ENST00000395185 STK26Q9P289 416 aa12.07□□□□□ -0.48
HERC4-203ENST00000395185 C14orf93Q9H972 538 aaKnown RBP12.06□□□□□ -0.48
HERC4-203ENST00000395185 NKTRP30414 1462 aaKnown RBP12.06□□□□□ -0.48
HERC4-203ENST00000395185 NRXN1Q9ULB1 1477 aa12.06□□□□□ -0.48
HERC4-203ENST00000395185 PRAG1Q86YV5 1406 aa12.05□□□□□ -0.48
HERC4-203ENST00000395185 TMEM132EQ6IEE7 984 aa12.04□□□□□ -0.48
HERC4-203ENST00000395185 MYOM2P54296 1465 aa12.03□□□□□ -0.48
HERC4-203ENST00000395185 SIRT1Q96EB6 747 aa12.03□□□□□ -0.48
HERC4-203ENST00000395185 DIP2AQ14689 1571 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms