RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 COG3Q96JB2 828 aa9.04□□□□□ -0.96
SYNE2-205ENST00000394768 SLC3A2P08195 630 aaKnown RBP9.04□□□□□ -0.96
SYNE2-205ENST00000394768 CAGE1Q8TC20 777 aa9.04□□□□□ -0.96
SYNE2-205ENST00000394768 HSP90B2PQ58FF3 399 aa9.03□□□□□ -0.96
SYNE2-205ENST00000394768 B4GALNT3Q6L9W6 998 aa9.03□□□□□ -0.96
SYNE2-205ENST00000394768 ERCC4Q92889 916 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-205ENST00000394768 CCAR2Q8N163 923 aaKnown RBP9.03□□□□□ -0.96
SYNE2-205ENST00000394768 EVC2Q86UK5 1308 aa9.03□□□□□ -0.96
SYNE2-205ENST00000394768 PIP4K2AP48426 406 aaPredicted RBP9.03□□□□□ -0.96
SYNE2-205ENST00000394768 MIA2Q96PC5 1412 aa9.02□□□□□ -0.96
SYNE2-205ENST00000394768 LUC7LQ9NQ29 371 aaKnown RBP9.02□□□□□ -0.97
SYNE2-205ENST00000394768 SART3Q15020 963 aaKnown RBP9.02□□□□□ -0.97
SYNE2-205ENST00000394768 HSP90AB2PQ58FF8 381 aa9.02□□□□□ -0.97
SYNE2-205ENST00000394768 OFD1O75665 1012 aa9.02□□□□□ -0.97
SYNE2-205ENST00000394768 NLRP13Q86W25 1043 aa9.02□□□□□ -0.97
SYNE2-205ENST00000394768 APPP05067 770 aa9.02□□□□□ -0.97
SYNE2-205ENST00000394768 PKD2Q13563 968 aa9.02□□□□□ -0.97
SYNE2-205ENST00000394768 KIF15Q9NS87 1388 aa9.02□□□□□ -0.97
SYNE2-205ENST00000394768 CCDC144AA2RUR9 1427 aa9.02□□□□□ -0.97
SYNE2-205ENST00000394768 MCTP1Q6DN14 999 aa9.02□□□□□ -0.97
SYNE2-205ENST00000394768 ERC2O15083 957 aa9.02□□□□□ -0.97
SYNE2-205ENST00000394768 SYCP1Q15431 976 aa9.01□□□□□ -0.97
SYNE2-205ENST00000394768 KIF7Q2M1P5 1343 aa9.01□□□□□ -0.97
SYNE2-205ENST00000394768 VGFO15240 615 aaPredicted RBP9.01□□□□□ -0.97
SYNE2-205ENST00000394768 CCP110O43303 1012 aa9.01□□□□□ -0.97
SYNE2-205ENST00000394768 AAMPQ13685 434 aa9.01□□□□□ -0.97
SYNE2-205ENST00000394768 NFXL1Q6ZNB6 911 aa9.01□□□□□ -0.97
SYNE2-205ENST00000394768 CHMP5Q9NZZ3 219 aa9.01□□□□□ -0.97
SYNE2-205ENST00000394768 NINLQ9Y2I6 1382 aa9□□□□□ -0.97
SYNE2-205ENST00000394768 IFIT2P09913 472 aaKnown RBP9□□□□□ -0.97
SYNE2-205ENST00000394768 RALYLQ86SE5 291 aaKnown RBP9□□□□□ -0.97
SYNE2-205ENST00000394768 TXLNAP40222 546 aa9□□□□□ -0.97
SYNE2-205ENST00000394768 AMER1Q5JTC6 1135 aaPredicted RBP9□□□□□ -0.97
SYNE2-205ENST00000394768 WDHD1O75717 1129 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-205ENST00000394768 ERLIN2O94905 339 aa8.99□□□□□ -0.97
SYNE2-205ENST00000394768 SF3B2Q13435 895 aaKnown RBP8.99□□□□□ -0.97
SYNE2-205ENST00000394768 GZF1Q9H116 711 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-205ENST00000394768 SMG6Q86US8 1419 aaKnown RBP8.99□□□□□ -0.97
SYNE2-205ENST00000394768 NAP1L1P55209 391 aaKnown RBP8.99□□□□□ -0.97
SYNE2-205ENST00000394768 OLFM4Q6UX06 510 aa8.99□□□□□ -0.97
SYNE2-205ENST00000394768 SLKQ9H2G2 1235 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-205ENST00000394768 CWC15Q9P013 229 aaKnown RBP8.99□□□□□ -0.97
SYNE2-205ENST00000394768 TMEM132AQ24JP5 1023 aa8.99□□□□□ -0.97
SYNE2-205ENST00000394768 HOMER1Q86YM7 354 aa8.99□□□□□ -0.97
SYNE2-205ENST00000394768 ZFYVE27Q5T4F4 411 aa8.99□□□□□ -0.97
SYNE2-205ENST00000394768 EZRP15311 586 aaKnown RBP8.98□□□□□ -0.97
SYNE2-205ENST00000394768 G3BP1Q13283 466 aaKnown RBP eCLIP8.98□□□□□ -0.97
SYNE2-205ENST00000394768 KAT6BQ8WYB5 2073 aa8.98□□□□□ -0.97
SYNE2-205ENST00000394768 FBXW7Q969H0 707 aa8.98□□□□□ -0.97
SYNE2-205ENST00000394768 ABCC8Q09428 1581 aa8.98□□□□□ -0.97
SYNE2-205ENST00000394768 KIF3BO15066 747 aa8.98□□□□□ -0.97
SYNE2-205ENST00000394768 RILPL2Q969X0 211 aa8.98□□□□□ -0.97
SYNE2-205ENST00000394768 GOLGA6L7A0A1B0GV03 622 aa8.98□□□□□ -0.97
SYNE2-205ENST00000394768 CCDC73Q6ZRK6 1079 aa8.98□□□□□ -0.97
SYNE2-205ENST00000394768 RTN4Q9NQC3 1192 aaKnown RBP8.97□□□□□ -0.97
SYNE2-205ENST00000394768 PATL2C9JE40 543 aaKnown RBP8.97□□□□□ -0.97
SYNE2-205ENST00000394768 MAP7D2Q96T17 732 aa8.97□□□□□ -0.97
SYNE2-205ENST00000394768 CENPQQ7L2Z9 268 aaPredicted RBP8.97□□□□□ -0.97
SYNE2-205ENST00000394768 SMARCE1Q969G3 411 aa8.97□□□□□ -0.97
SYNE2-205ENST00000394768 FEZ1Q99689 392 aa8.97□□□□□ -0.97
SYNE2-205ENST00000394768 E9PSI1 815 aa8.97□□□□□ -0.97
SYNE2-205ENST00000394768 DDX19BQ9UMR2 479 aa8.97□□□□□ -0.97
SYNE2-205ENST00000394768 SASS6Q6UVJ0 657 aa8.96□□□□□ -0.97
SYNE2-205ENST00000394768 STAC3Q96MF2 364 aa8.96□□□□□ -0.97
SYNE2-205ENST00000394768 VPS8Q8N3P4 1428 aa8.96□□□□□ -0.97
SYNE2-205ENST00000394768 ATF3P18847 181 aa8.96□□□□□ -0.97
SYNE2-205ENST00000394768 PSMA5P28066 241 aa8.96□□□□□ -0.97
SYNE2-205ENST00000394768 PSME1Q06323 249 aa8.96□□□□□ -0.97
SYNE2-205ENST00000394768 ZKSCAN2Q63HK3 967 aa8.96□□□□□ -0.98
SYNE2-205ENST00000394768 CDK5RAP3Q96JB5 506 aa8.96□□□□□ -0.98
SYNE2-205ENST00000394768 PHF23Q9BUL5 403 aaPredicted RBP8.96□□□□□ -0.98
SYNE2-205ENST00000394768 RSPH6AQ9H0K4 717 aa8.96□□□□□ -0.98
SYNE2-205ENST00000394768 GNL3LQ9NVN8 582 aaKnown RBP8.96□□□□□ -0.98
SYNE2-205ENST00000394768 FBXO3Q9UK99 471 aa8.96□□□□□ -0.98
SYNE2-205ENST00000394768 TBC1D2BQ9UPU7 963 aa8.96□□□□□ -0.98
SYNE2-205ENST00000394768 HIP1O00291 1037 aa8.96□□□□□ -0.98
SYNE2-205ENST00000394768 PRDM2Q13029 1718 aa8.96□□□□□ -0.98
SYNE2-205ENST00000394768 RABEP1Q15276 862 aa8.95□□□□□ -0.98
SYNE2-205ENST00000394768 SCAPERQ9BY12 1400 aa8.95□□□□□ -0.98
SYNE2-205ENST00000394768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.95□□□□□ -0.98
SYNE2-205ENST00000394768 API5Q9BZZ5 524 aaKnown RBP8.95□□□□□ -0.98
SYNE2-205ENST00000394768 MTERF4Q7Z6M4 381 aaKnown RBP8.95□□□□□ -0.98
SYNE2-205ENST00000394768 BICD2Q8TD16 824 aa8.95□□□□□ -0.98
SYNE2-205ENST00000394768 IKQ13123 557 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-205ENST00000394768 LTV1Q96GA3 475 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-205ENST00000394768 DDX49Q9Y6V7 483 aaKnown RBP8.95□□□□□ -0.98
SYNE2-205ENST00000394768 SYTL4Q96C24 671 aaPredicted RBP8.95□□□□□ -0.98
SYNE2-205ENST00000394768 ANO2Q9NQ90 1003 aa8.95□□□□□ -0.98
SYNE2-205ENST00000394768 GOLGA6L10A6NI86 522 aa8.94□□□□□ -0.98
SYNE2-205ENST00000394768 LETM1O95202 739 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-205ENST00000394768 DEKP35659 375 aaKnown RBP8.94□□□□□ -0.98
SYNE2-205ENST00000394768 RAPGEF4Q8WZA2 1011 aa8.94□□□□□ -0.98
SYNE2-205ENST00000394768 SEPT7Q16181 437 aaKnown RBP8.94□□□□□ -0.98
SYNE2-205ENST00000394768 MAGEC2Q9UBF1 373 aaPredicted RBP8.94□□□□□ -0.98
SYNE2-205ENST00000394768 PDCP20941 246 aa8.94□□□□□ -0.98
SYNE2-205ENST00000394768 MNS1Q8NEH6 495 aa8.94□□□□□ -0.98
SYNE2-205ENST00000394768 MYBBP1AQ9BQG0 1328 aaKnown RBP8.94□□□□□ -0.98
SYNE2-205ENST00000394768 IQCEQ6IPM2 695 aa8.93□□□□□ -0.98
SYNE2-205ENST00000394768 NOL8Q76FK4 1167 aaKnown RBP8.93□□□□□ -0.98
SYNE2-205ENST00000394768 INTS3Q68E01 1043 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms