RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 ESF1Q9H501 851 aaKnown RBP27.85■■■□□ 2.05
PRKCD-202ENST00000394729 GPRASP1Q5JY77 1395 aa27.84■■■□□ 2.05
PRKCD-202ENST00000394729 MROH2AA6NES4 1674 aa27.84■■■□□ 2.05
PRKCD-202ENST00000394729 MADDQ8WXG6 1647 aa27.82■■■□□ 2.04
PRKCD-202ENST00000394729 KIF13AQ9H1H9 1805 aa27.81■■■□□ 2.04
PRKCD-202ENST00000394729 SIGLEC1Q9BZZ2 1709 aa27.8■■■□□ 2.04
PRKCD-202ENST00000394729 KIF1BO60333 1816 aa27.79■■■□□ 2.04
PRKCD-202ENST00000394729 CAMSAP1Q5T5Y3 1602 aa27.78■■■□□ 2.04
PRKCD-202ENST00000394729 LMTK2Q8IWU2 1503 aa27.78■■■□□ 2.04
PRKCD-202ENST00000394729 TMC1Q8TDI8 760 aa27.76■■■□□ 2.03
PRKCD-202ENST00000394729 BCANQ96GW7 911 aa27.75■■■□□ 2.03
PRKCD-202ENST00000394729 SALL2Q9Y467 1007 aaPredicted RBP27.75■■■□□ 2.03
PRKCD-202ENST00000394729 CEBPAP49715 358 aaPredicted RBP27.73■■■□□ 2.03
PRKCD-202ENST00000394729 POLR1AO95602 1720 aaPredicted RBP27.72■■■□□ 2.03
PRKCD-202ENST00000394729 SYNMO15061 1565 aa27.71■■■□□ 2.03
PRKCD-202ENST00000394729 SCAF11Q99590 1463 aaKnown RBP27.71■■■□□ 2.03
PRKCD-202ENST00000394729 VGFO15240 615 aaPredicted RBP27.68■■■□□ 2.02
PRKCD-202ENST00000394729 ADGRB3O60242 1522 aa27.67■■■□□ 2.02
PRKCD-202ENST00000394729 SLC52A1Q9NWF4 448 aa27.67■■■□□ 2.02
PRKCD-202ENST00000394729 PER1O15534 1290 aaPredicted RBP27.66■■■□□ 2.02
PRKCD-202ENST00000394729 ZMYM4Q5VZL5 1548 aa27.66■■■□□ 2.02
PRKCD-202ENST00000394729 C14orf93Q9H972 538 aaKnown RBP27.65■■■□□ 2.02
PRKCD-202ENST00000394729 IRX6P78412 446 aaPredicted RBP27.64■■■□□ 2.02
PRKCD-202ENST00000394729 STAC3Q96MF2 364 aa27.63■■■□□ 2.01
PRKCD-202ENST00000394729 EIF3AQ14152 1382 aaKnown RBP27.62■■■□□ 2.01
PRKCD-202ENST00000394729 CENPJQ9HC77 1338 aaPredicted RBP27.62■■■□□ 2.01
PRKCD-202ENST00000394729 KNSTRNQ9Y448 316 aa27.62■■■□□ 2.01
PRKCD-202ENST00000394729 CLTCQ00610 1675 aaKnown RBP27.6■■■□□ 2.01
PRKCD-202ENST00000394729 KTN1Q86UP2 1357 aaKnown RBP27.6■■■□□ 2.01
PRKCD-202ENST00000394729 TNNT2P45379 298 aaPredicted RBP27.59■■■□□ 2.01
PRKCD-202ENST00000394729 MYOM2P54296 1465 aa27.59■■■□□ 2.01
PRKCD-202ENST00000394729 FKBP8Q14318 412 aa27.59■■■□□ 2.01
PRKCD-202ENST00000394729 PIK3C2GO75747 1445 aa27.58■■■□□ 2.01
PRKCD-202ENST00000394729 MYO5BQ9ULV0 1848 aa27.58■■■□□ 2.01
PRKCD-202ENST00000394729 SLC12A5Q9H2X9 1139 aa27.57■■■□□ 2
PRKCD-202ENST00000394729 ZMYM3Q14202 1370 aa27.57■■■□□ 2
PRKCD-202ENST00000394729 ARHGAP31Q2M1Z3 1444 aa27.55■■■□□ 2
PRKCD-202ENST00000394729 MINK1Q8N4C8 1332 aaPredicted RBP27.55■■■□□ 2
PRKCD-202ENST00000394729 MYBBP1AQ9BQG0 1328 aaKnown RBP27.55■■■□□ 2
PRKCD-202ENST00000394729 CABP2Q9NPB3 220 aa27.55■■■□□ 2
PRKCD-202ENST00000394729 RPGRIP1LQ68CZ1 1315 aa27.54■■■□□ 2
PRKCD-202ENST00000394729 IQGAP1P46940 1657 aa27.54■■■□□ 2
PRKCD-202ENST00000394729 ERVK-7P63135 1459 aa27.54■■■□□ 2
PRKCD-202ENST00000394729 PREX1Q8TCU6 1659 aa27.54■■■□□ 2
PRKCD-202ENST00000394729 SUPT16HQ9Y5B9 1047 aaKnown RBP27.54■■■□□ 2
PRKCD-202ENST00000394729 CDCA8Q53HL2 280 aa27.53■■■□□ 2
PRKCD-202ENST00000394729 PNISRQ8TF01 805 aaKnown RBP27.52■■■□□ 2
PRKCD-202ENST00000394729 PIK3C2BO00750 1634 aa27.52■■■□□ 2
PRKCD-202ENST00000394729 LAMC1P11047 1609 aa27.52■■■□□ 2
PRKCD-202ENST00000394729 RALBP1Q15311 655 aa27.51■■□□□ 1.99
PRKCD-202ENST00000394729 PPLO60437 1756 aa27.51■■□□□ 1.99
PRKCD-202ENST00000394729 POGKQ9P215 609 aa27.51■■□□□ 1.99
PRKCD-202ENST00000394729 IFT172Q9UG01 1749 aa27.5■■□□□ 1.99
PRKCD-202ENST00000394729 PRAM1Q96QH2 718 aa27.5■■□□□ 1.99
PRKCD-202ENST00000394729 NEXMIFQ5QGS0 1516 aa27.49■■□□□ 1.99
PRKCD-202ENST00000394729 ARHGEF40Q8TER5 1519 aa27.49■■□□□ 1.99
PRKCD-202ENST00000394729 SRPK2P78362 688 aaKnown RBP27.48■■□□□ 1.99
PRKCD-202ENST00000394729 WAPLQ7Z5K2 1190 aa27.48■■□□□ 1.99
PRKCD-202ENST00000394729 CARD14Q9BXL6 1004 aa27.47■■□□□ 1.99
PRKCD-202ENST00000394729 NRXN1Q9ULB1 1477 aa27.47■■□□□ 1.99
PRKCD-202ENST00000394729 ZC3H13Q5T200 1668 aaKnown RBP27.46■■□□□ 1.99
PRKCD-202ENST00000394729 NLRP13Q86W25 1043 aa27.46■■□□□ 1.99
PRKCD-202ENST00000394729 AMER1Q5JTC6 1135 aaPredicted RBP27.43■■□□□ 1.98
PRKCD-202ENST00000394729 PARD3Q8TEW0 1356 aa27.42■■□□□ 1.98
PRKCD-202ENST00000394729 TMEM131LA2VDJ0 1609 aa27.41■■□□□ 1.98
PRKCD-202ENST00000394729 AGLP35573 1532 aa27.41■■□□□ 1.98
PRKCD-202ENST00000394729 ADGRB1O14514 1584 aa27.41■■□□□ 1.98
PRKCD-202ENST00000394729 NEFLP07196 543 aa27.4■■□□□ 1.98
PRKCD-202ENST00000394729 PPP6R1Q9UPN7 881 aa27.39■■□□□ 1.97
PRKCD-202ENST00000394729 TXNDC2Q86VQ3 553 aa27.38■■□□□ 1.97
PRKCD-202ENST00000394729 NEURL4Q96JN8 1562 aa27.38■■□□□ 1.97
PRKCD-202ENST00000394729 RIMS2Q9UQ26 1411 aa27.37■■□□□ 1.97
PRKCD-202ENST00000394729 NUTM2FA1L443 756 aa27.36■■□□□ 1.97
PRKCD-202ENST00000394729 PPP2R1AP30153 589 aa27.36■■□□□ 1.97
PRKCD-202ENST00000394729 A2ML1A8K2U0 1454 aa27.36■■□□□ 1.97
PRKCD-202ENST00000394729 SLC26A8Q96RN1 970 aa27.36■■□□□ 1.97
PRKCD-202ENST00000394729 KIAA1210Q9ULL0 1709 aa27.35■■□□□ 1.97
PRKCD-202ENST00000394729 BRD4O60885 1362 aaPredicted RBP27.35■■□□□ 1.97
PRKCD-202ENST00000394729 TNRQ92752 1358 aa27.35■■□□□ 1.97
PRKCD-202ENST00000394729 ZBED9Q6R2W3 1325 aa27.34■■□□□ 1.97
PRKCD-202ENST00000394729 EVC2Q86UK5 1308 aa27.34■■□□□ 1.97
PRKCD-202ENST00000394729 PLEKHH1Q9ULM0 1364 aa27.31■■□□□ 1.96
PRKCD-202ENST00000394729 REREQ9P2R6 1566 aa27.31■■□□□ 1.96
PRKCD-202ENST00000394729 ADAMTS8Q9UP79 889 aa27.31■■□□□ 1.96
PRKCD-202ENST00000394729 KDM5AP29375 1690 aaKnown RBP27.31■■□□□ 1.96
PRKCD-202ENST00000394729 CCDC146Q8IYE0 955 aa27.3■■□□□ 1.96
PRKCD-202ENST00000394729 QRICH2Q9H0J4 1663 aa27.29■■□□□ 1.96
PRKCD-202ENST00000394729 YTHDC2Q9H6S0 1430 aaKnown RBP27.29■■□□□ 1.96
PRKCD-202ENST00000394729 NSD3Q9BZ95 1437 aa27.29■■□□□ 1.96
PRKCD-202ENST00000394729 ASXL1Q8IXJ9 1541 aa27.29■■□□□ 1.96
PRKCD-202ENST00000394729 LTKP29376 864 aa27.29■■□□□ 1.96
PRKCD-202ENST00000394729 NCKAP5LQ9HCH0 1330 aa27.27■■□□□ 1.96
PRKCD-202ENST00000394729 METP08581 1390 aa27.27■■□□□ 1.96
PRKCD-202ENST00000394729 SETBP1Q9Y6X0 1596 aa27.26■■□□□ 1.95
PRKCD-202ENST00000394729 MYOM1P52179 1685 aa27.26■■□□□ 1.95
PRKCD-202ENST00000394729 WDR43Q15061 677 aaKnown RBP eCLIP27.26■■□□□ 1.95
PRKCD-202ENST00000394729 MORC1Q86VD1 984 aa27.26■■□□□ 1.95
PRKCD-202ENST00000394729 CDK19Q9BWU1 502 aa27.26■■□□□ 1.95
PRKCD-202ENST00000394729 SPATA31D1Q6ZQQ2 1576 aa27.25■■□□□ 1.95
PRKCD-202ENST00000394729 GGNBP2Q9H3C7 697 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms