RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TRAPPC8Q9Y2L5 1435 aa24.51■■□□□ 1.51
HOXC6-202ENST00000394331 PER1O15534 1290 aaPredicted RBP24.51■■□□□ 1.51
HOXC6-202ENST00000394331 RTEL1-TNFRSF6BF6WH68 1400 aa24.5■■□□□ 1.51
HOXC6-202ENST00000394331 HSP90AA2PQ14568 343 aaPredicted RBP24.49■■□□□ 1.51
HOXC6-202ENST00000394331 SPAG9O60271 1321 aaKnown RBP24.49■■□□□ 1.51
HOXC6-202ENST00000394331 ZMYM4Q5VZL5 1548 aa24.49■■□□□ 1.51
HOXC6-202ENST00000394331 ARAP3Q8WWN8 1544 aa24.49■■□□□ 1.51
HOXC6-202ENST00000394331 TMF1P82094 1093 aa24.48■■□□□ 1.51
HOXC6-202ENST00000394331 FAM161AQ3B820 660 aa24.48■■□□□ 1.51
HOXC6-202ENST00000394331 INSRP06213 1382 aa24.48■■□□□ 1.51
HOXC6-202ENST00000394331 KDM2BQ8NHM5 1336 aa24.47■■□□□ 1.51
HOXC6-202ENST00000394331 SLC4A3P48751 1232 aa24.47■■□□□ 1.51
HOXC6-202ENST00000394331 STAC3Q96MF2 364 aa24.45■■□□□ 1.51
HOXC6-202ENST00000394331 DISP3Q9P2K9 1392 aa24.45■■□□□ 1.51
HOXC6-202ENST00000394331 CLCN1P35523 988 aa24.45■■□□□ 1.5
HOXC6-202ENST00000394331 VIRMAQ69YN4 1812 aaKnown RBP24.44■■□□□ 1.5
HOXC6-202ENST00000394331 HSP90AA1P07900 732 aaKnown RBP24.44■■□□□ 1.5
HOXC6-202ENST00000394331 C8orf34Q49A92 452 aa24.43■■□□□ 1.5
HOXC6-202ENST00000394331 CENPQQ7L2Z9 268 aaPredicted RBP24.41■■□□□ 1.5
HOXC6-202ENST00000394331 AFAP1Q8N556 730 aa24.4■■□□□ 1.5
HOXC6-202ENST00000394331 PANK3Q9H999 370 aa24.4■■□□□ 1.5
HOXC6-202ENST00000394331 PNNQ9H307 717 aaKnown RBP24.4■■□□□ 1.5
HOXC6-202ENST00000394331 RNF17Q9BXT8 1623 aaKnown RBP24.39■■□□□ 1.49
HOXC6-202ENST00000394331 ZFYVE16Q7Z3T8 1539 aa24.38■■□□□ 1.49
HOXC6-202ENST00000394331 TRPM2O94759 1503 aa24.38■■□□□ 1.49
HOXC6-202ENST00000394331 PTPRTO14522 1441 aa24.37■■□□□ 1.49
HOXC6-202ENST00000394331 SENP3-EIF4A1A0A087X0R7 540 aa24.37■■□□□ 1.49
HOXC6-202ENST00000394331 CC2D1BQ5T0F9 858 aaKnown RBP24.35■■□□□ 1.49
HOXC6-202ENST00000394331 CRBNQ96SW2 442 aa24.35■■□□□ 1.49
HOXC6-202ENST00000394331 NAP1L5Q96NT1 182 aaPredicted RBP24.35■■□□□ 1.49
HOXC6-202ENST00000394331 POGKQ9P215 609 aa24.34■■□□□ 1.49
HOXC6-202ENST00000394331 KANK1Q14678 1352 aa24.34■■□□□ 1.49
HOXC6-202ENST00000394331 WDR7Q9Y4E6 1490 aa24.34■■□□□ 1.49
HOXC6-202ENST00000394331 SLC24A1O60721 1099 aa24.33■■□□□ 1.49
HOXC6-202ENST00000394331 CDCA8Q53HL2 280 aa24.33■■□□□ 1.48
HOXC6-202ENST00000394331 MADDQ8WXG6 1647 aa24.32■■□□□ 1.48
HOXC6-202ENST00000394331 CENPJQ9HC77 1338 aaPredicted RBP24.32■■□□□ 1.48
HOXC6-202ENST00000394331 DEPDC5O75140 1603 aa24.31■■□□□ 1.48
HOXC6-202ENST00000394331 SCAPERQ9BY12 1400 aa24.31■■□□□ 1.48
HOXC6-202ENST00000394331 FANCAO15360 1455 aa24.3■■□□□ 1.48
HOXC6-202ENST00000394331 PODXL2Q9NZ53 605 aa24.3■■□□□ 1.48
HOXC6-202ENST00000394331 BLMP54132 1417 aaPredicted RBP24.29■■□□□ 1.48
HOXC6-202ENST00000394331 SCAF11Q99590 1463 aaKnown RBP24.29■■□□□ 1.48
HOXC6-202ENST00000394331 ATP7AQ04656 1500 aa24.29■■□□□ 1.48
HOXC6-202ENST00000394331 TET3O43151 1660 aa24.28■■□□□ 1.48
HOXC6-202ENST00000394331 FSD2A1L4K1 749 aa24.28■■□□□ 1.48
HOXC6-202ENST00000394331 SPHKAPQ2M3C7 1700 aa24.28■■□□□ 1.48
HOXC6-202ENST00000394331 SKAP1Q86WV1 359 aa24.27■■□□□ 1.48
HOXC6-202ENST00000394331 CEP152O94986 1710 aa24.27■■□□□ 1.48
HOXC6-202ENST00000394331 ABCA9Q8IUA7 1624 aa24.27■■□□□ 1.48
HOXC6-202ENST00000394331 INO80Q9ULG1 1556 aaPredicted RBP24.26■■□□□ 1.47
HOXC6-202ENST00000394331 IQGAP1P46940 1657 aa24.26■■□□□ 1.47
HOXC6-202ENST00000394331 KNSTRNQ9Y448 316 aa24.26■■□□□ 1.47
HOXC6-202ENST00000394331 VWDEQ8N2E2 1590 aa24.26■■□□□ 1.47
HOXC6-202ENST00000394331 CLTCL1P53675 1640 aa24.25■■□□□ 1.47
HOXC6-202ENST00000394331 KIF3BO15066 747 aa24.24■■□□□ 1.47
HOXC6-202ENST00000394331 EIF3AQ14152 1382 aaKnown RBP24.23■■□□□ 1.47
HOXC6-202ENST00000394331 NEURL4Q96JN8 1562 aa24.23■■□□□ 1.47
HOXC6-202ENST00000394331 ADGRL1O94910 1474 aa24.22■■□□□ 1.47
HOXC6-202ENST00000394331 BECN1Q14457 450 aa24.22■■□□□ 1.47
HOXC6-202ENST00000394331 XRCC6P12956 609 aaKnown RBP eCLIP24.21■■□□□ 1.47
HOXC6-202ENST00000394331 PLIN1O60240 522 aa24.21■■□□□ 1.47
HOXC6-202ENST00000394331 GOLGA6L3A6NEY3 463 aa24.21■■□□□ 1.47
HOXC6-202ENST00000394331 SYNMO15061 1565 aa24.19■■□□□ 1.46
HOXC6-202ENST00000394331 TPM2P07951 284 aa24.18■■□□□ 1.46
HOXC6-202ENST00000394331 CDCA7LQ96GN5 454 aa24.18■■□□□ 1.46
HOXC6-202ENST00000394331 AMER1Q5JTC6 1135 aaPredicted RBP24.17■■□□□ 1.46
HOXC6-202ENST00000394331 USP19O94966 1318 aa24.17■■□□□ 1.46
HOXC6-202ENST00000394331 ANTXR1Q9H6X2 564 aa24.17■■□□□ 1.46
HOXC6-202ENST00000394331 PPP2R1AP30153 589 aa24.16■■□□□ 1.46
HOXC6-202ENST00000394331 PDCL3Q9H2J4 239 aa24.16■■□□□ 1.46
HOXC6-202ENST00000394331 KIAA1210Q9ULL0 1709 aa24.16■■□□□ 1.46
HOXC6-202ENST00000394331 NPC1L1Q9UHC9 1359 aa24.15■■□□□ 1.46
HOXC6-202ENST00000394331 ASXL2Q76L83 1435 aa24.14■■□□□ 1.46
HOXC6-202ENST00000394331 ISY1Q9ULR0 285 aaKnown RBP24.14■■□□□ 1.45
HOXC6-202ENST00000394331 MYOM2P54296 1465 aa24.14■■□□□ 1.45
HOXC6-202ENST00000394331 CALD1Q05682 793 aaKnown RBP24.13■■□□□ 1.45
HOXC6-202ENST00000394331 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
HOXC6-202ENST00000394331 WDR43Q15061 677 aaKnown RBP eCLIP24.13■■□□□ 1.45
HOXC6-202ENST00000394331 ASXL1Q8IXJ9 1541 aa24.13■■□□□ 1.45
HOXC6-202ENST00000394331 MROH1Q8NDA8 1641 aa24.12■■□□□ 1.45
HOXC6-202ENST00000394331 NLRP1Q9C000 1473 aa24.11■■□□□ 1.45
HOXC6-202ENST00000394331 MRE11P49959 708 aa24.11■■□□□ 1.45
HOXC6-202ENST00000394331 C20orf194Q5TEA3 1177 aa24.1■■□□□ 1.45
HOXC6-202ENST00000394331 PIK3C2GO75747 1445 aa24.1■■□□□ 1.45
HOXC6-202ENST00000394331 EFCAB6Q5THR3 1501 aa24.09■■□□□ 1.45
HOXC6-202ENST00000394331 MAP3K4Q9Y6R4 1608 aa24.08■■□□□ 1.45
HOXC6-202ENST00000394331 CFAP70Q5T0N1 1121 aa24.08■■□□□ 1.45
HOXC6-202ENST00000394331 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.07■■□□□ 1.44
HOXC6-202ENST00000394331 ZNF518AQ6AHZ1 1483 aa24.07■■□□□ 1.44
HOXC6-202ENST00000394331 LMTK2Q8IWU2 1503 aa24.07■■□□□ 1.44
HOXC6-202ENST00000394331 ESPNB1AK53 854 aa24.06■■□□□ 1.44
HOXC6-202ENST00000394331 ZMYM3Q14202 1370 aa24.06■■□□□ 1.44
HOXC6-202ENST00000394331 ADGRF5Q8IZF2 1346 aa24.05■■□□□ 1.44
HOXC6-202ENST00000394331 NPM1P06748 294 aaKnown RBP eCLIP24.04■■□□□ 1.44
HOXC6-202ENST00000394331 KDM5AP29375 1690 aaKnown RBP24.04■■□□□ 1.44
HOXC6-202ENST00000394331 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
HOXC6-202ENST00000394331 UGGT1Q9NYU2 1555 aa24.03■■□□□ 1.44
HOXC6-202ENST00000394331 PANK2Q9BZ23 570 aa24.03■■□□□ 1.44
HOXC6-202ENST00000394331 MYOM1P52179 1685 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms