RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 NBPF1Q3BBV0 1214 aa33.08■■■□□ 2.89
CNN3-202ENST00000394202 RALGAPBQ86X10 1494 aa33.07■■■□□ 2.89
CNN3-202ENST00000394202 HIRIP3Q9BW71 556 aaPredicted RBP33.05■■■□□ 2.88
CNN3-202ENST00000394202 NRXN1Q9ULB1 1477 aa33.04■■■□□ 2.88
CNN3-202ENST00000394202 KDM4FA0A1W2PPD8 638 aa33.04■■■□□ 2.88
CNN3-202ENST00000394202 TRPM1Q7Z4N2 1603 aa33.04■■■□□ 2.88
CNN3-202ENST00000394202 ZNF316A6NFI3 1004 aaPredicted RBP33.02■■■□□ 2.88
CNN3-202ENST00000394202 UBR1Q8IWV7 1749 aa33.01■■■□□ 2.88
CNN3-202ENST00000394202 VGFO15240 615 aaPredicted RBP33.01■■■□□ 2.88
CNN3-202ENST00000394202 SENP3Q9H4L4 574 aaPredicted RBP33.01■■■□□ 2.87
CNN3-202ENST00000394202 ROCK2O75116 1388 aaKnown RBP33■■■□□ 2.87
CNN3-202ENST00000394202 MYO3AQ8NEV4 1616 aa33■■■□□ 2.87
CNN3-202ENST00000394202 CFAP70Q5T0N1 1121 aa32.99■■■□□ 2.87
CNN3-202ENST00000394202 CARD11Q9BXL7 1154 aa32.98■■■□□ 2.87
CNN3-202ENST00000394202 RIMS2Q9UQ26 1411 aa32.98■■■□□ 2.87
CNN3-202ENST00000394202 PIK3C2GO75747 1445 aa32.97■■■□□ 2.87
CNN3-202ENST00000394202 ZFYVE9O95405 1425 aa32.96■■■□□ 2.87
CNN3-202ENST00000394202 KDM5AP29375 1690 aaKnown RBP32.96■■■□□ 2.87
CNN3-202ENST00000394202 HSPA5P11021 654 aaKnown RBP32.96■■■□□ 2.87
CNN3-202ENST00000394202 TMEM2Q9UHN6 1383 aa32.94■■■□□ 2.86
CNN3-202ENST00000394202 GPRASP1Q5JY77 1395 aa32.94■■■□□ 2.86
CNN3-202ENST00000394202 EIF4G2P78344 907 aaKnown RBP eCLIP32.93■■■□□ 2.86
CNN3-202ENST00000394202 SETD1BQ9UPS6 1966 aaKnown RBP32.91■■■□□ 2.86
CNN3-202ENST00000394202 C14orf93Q9H972 538 aaKnown RBP32.9■■■□□ 2.86
CNN3-202ENST00000394202 CEP170BQ9Y4F5 1589 aaPredicted RBP32.9■■■□□ 2.86
CNN3-202ENST00000394202 USP47Q96K76 1375 aa32.89■■■□□ 2.86
CNN3-202ENST00000394202 LTKP29376 864 aa32.88■■■□□ 2.85
CNN3-202ENST00000394202 THEMISQ8N1K5 641 aaPredicted RBP32.88■■■□□ 2.85
CNN3-202ENST00000394202 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.86■■■□□ 2.85
CNN3-202ENST00000394202 KIAA1210Q9ULL0 1709 aa32.85■■■□□ 2.85
CNN3-202ENST00000394202 TMEM132EQ6IEE7 984 aa32.83■■■□□ 2.85
CNN3-202ENST00000394202 ARHGAP23Q9P227 1491 aa32.82■■■□□ 2.85
CNN3-202ENST00000394202 TXNDC2Q86VQ3 553 aa32.82■■■□□ 2.84
CNN3-202ENST00000394202 SLIT1O75093 1534 aa32.82■■■□□ 2.84
CNN3-202ENST00000394202 HDGFP51858 240 aaKnown RBP32.81■■■□□ 2.84
CNN3-202ENST00000394202 ZNF142P52746 1687 aaPredicted RBP32.8■■■□□ 2.84
CNN3-202ENST00000394202 LAMC1P11047 1609 aa32.79■■■□□ 2.84
CNN3-202ENST00000394202 ST20-MTHFSA0A0A6YYL1 179 aa32.78■■■□□ 2.84
CNN3-202ENST00000394202 ADGRB1O14514 1584 aa32.77■■■□□ 2.84
CNN3-202ENST00000394202 EID1Q9Y6B2 187 aa32.76■■■□□ 2.83
CNN3-202ENST00000394202 ALKQ9UM73 1620 aa32.75■■■□□ 2.83
CNN3-202ENST00000394202 SETBP1Q9Y6X0 1596 aa32.74■■■□□ 2.83
CNN3-202ENST00000394202 NRXN3Q9Y4C0 1643 aa32.73■■■□□ 2.83
CNN3-202ENST00000394202 ASXL1Q8IXJ9 1541 aa32.72■■■□□ 2.83
CNN3-202ENST00000394202 C11orf95C9JLR9 678 aaPredicted RBP32.72■■■□□ 2.83
CNN3-202ENST00000394202 SCAF11Q99590 1463 aaKnown RBP32.72■■■□□ 2.83
CNN3-202ENST00000394202 BCANQ96GW7 911 aa32.7■■■□□ 2.83
CNN3-202ENST00000394202 IQGAP1P46940 1657 aa32.7■■■□□ 2.83
CNN3-202ENST00000394202 PLEKHG1Q9ULL1 1385 aa32.7■■■□□ 2.82
CNN3-202ENST00000394202 TRAK1Q9UPV9 953 aa32.69■■■□□ 2.82
CNN3-202ENST00000394202 ADAMTS13Q76LX8 1427 aa32.66■■■□□ 2.82
CNN3-202ENST00000394202 SETD1AO15047 1707 aaKnown RBP32.65■■■□□ 2.82
CNN3-202ENST00000394202 STK26Q9P289 416 aa32.65■■■□□ 2.82
CNN3-202ENST00000394202 METP08581 1390 aa32.64■■■□□ 2.82
CNN3-202ENST00000394202 ANKLE2Q86XL3 938 aa32.64■■■□□ 2.82
CNN3-202ENST00000394202 SLC26A8Q96RN1 970 aa32.64■■■□□ 2.82
CNN3-202ENST00000394202 TESK2Q96S53 571 aa32.63■■■□□ 2.81
CNN3-202ENST00000394202 WASHC2AQ641Q2 1341 aa32.63■■■□□ 2.81
CNN3-202ENST00000394202 YTHDC2Q9H6S0 1430 aaKnown RBP32.59■■■□□ 2.81
CNN3-202ENST00000394202 MED14O60244 1454 aa32.58■■■□□ 2.81
CNN3-202ENST00000394202 HSPA2P54652 639 aa32.58■■■□□ 2.81
CNN3-202ENST00000394202 EIF3AQ14152 1382 aaKnown RBP32.56■■■□□ 2.8
CNN3-202ENST00000394202 NCKAP5LQ9HCH0 1330 aa32.56■■■□□ 2.8
CNN3-202ENST00000394202 KIF7Q2M1P5 1343 aa32.55■■■□□ 2.8
CNN3-202ENST00000394202 CCDC7Q96M83 1385 aa32.53■■■□□ 2.8
CNN3-202ENST00000394202 LMTK3Q96Q04 1460 aa32.53■■■□□ 2.8
CNN3-202ENST00000394202 DDX10Q13206 875 aaKnown RBP32.52■■■□□ 2.8
CNN3-202ENST00000394202 TBX22Q9Y458 520 aa32.52■■■□□ 2.8
CNN3-202ENST00000394202 LRPPRCP42704 1394 aaKnown RBP32.52■■■□□ 2.8
CNN3-202ENST00000394202 CENPJQ9HC77 1338 aaPredicted RBP32.51■■■□□ 2.8
CNN3-202ENST00000394202 DIEXFQ68CQ4 756 aaKnown RBP32.51■■■□□ 2.8
CNN3-202ENST00000394202 DISP3Q9P2K9 1392 aa32.51■■■□□ 2.79
CNN3-202ENST00000394202 ARHGEF28Q8N1W1 1705 aaKnown RBP32.49■■■□□ 2.79
CNN3-202ENST00000394202 SAFB2Q14151 953 aaKnown RBP eCLIP32.48■■■□□ 2.79
CNN3-202ENST00000394202 ABCC11Q96J66 1382 aa32.48■■■□□ 2.79
CNN3-202ENST00000394202 PTPRUQ92729 1446 aa32.47■■■□□ 2.79
CNN3-202ENST00000394202 PRAM1Q96QH2 718 aa32.47■■■□□ 2.79
CNN3-202ENST00000394202 POLR3GLQ9BT43 218 aa32.47■■■□□ 2.79
CNN3-202ENST00000394202 NPHP4O75161 1426 aaPredicted RBP32.45■■■□□ 2.79
CNN3-202ENST00000394202 WAPLQ7Z5K2 1190 aa32.44■■■□□ 2.78
CNN3-202ENST00000394202 TMF1P82094 1093 aa32.43■■■□□ 2.78
CNN3-202ENST00000394202 POLR1AO95602 1720 aaPredicted RBP32.43■■■□□ 2.78
CNN3-202ENST00000394202 DIP2AQ14689 1571 aa32.42■■■□□ 2.78
CNN3-202ENST00000394202 PLEKHH1Q9ULM0 1364 aa32.42■■■□□ 2.78
CNN3-202ENST00000394202 POGKQ9P215 609 aa32.41■■■□□ 2.78
CNN3-202ENST00000394202 QRICH2Q9H0J4 1663 aa32.4■■■□□ 2.78
CNN3-202ENST00000394202 SBNO2Q9Y2G9 1366 aa32.4■■■□□ 2.78
CNN3-202ENST00000394202 AMOTL2Q9Y2J4 779 aa32.39■■■□□ 2.78
CNN3-202ENST00000394202 DLC1Q96QB1 1528 aa32.39■■■□□ 2.78
CNN3-202ENST00000394202 TECPR2O15040 1411 aa32.39■■■□□ 2.78
CNN3-202ENST00000394202 ROBO2Q9HCK4 1378 aa32.38■■■□□ 2.77
CNN3-202ENST00000394202 MINK1Q8N4C8 1332 aaPredicted RBP32.34■■■□□ 2.77
CNN3-202ENST00000394202 KNDC1Q76NI1 1749 aa32.33■■■□□ 2.77
CNN3-202ENST00000394202 CPS1P31327 1500 aa32.32■■■□□ 2.77
CNN3-202ENST00000394202 SIRT1Q96EB6 747 aa32.32■■■□□ 2.77
CNN3-202ENST00000394202 PIK3R4Q99570 1358 aa32.31■■■□□ 2.76
CNN3-202ENST00000394202 FAM135BQ49AJ0 1406 aa32.31■■■□□ 2.76
CNN3-202ENST00000394202 KCNA6P17658 529 aa32.3■■■□□ 2.76
CNN3-202ENST00000394202 SLC24A1O60721 1099 aa32.28■■■□□ 2.76
CNN3-202ENST00000394202 TULP4Q9NRJ4 1543 aa32.28■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms