RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 AFF2P51816 1311 aa17.27■□□□□ 0.36
VTI1BP2-201ENST00000394154 ZRANB1Q9UGI0 708 aa17.26■□□□□ 0.35
VTI1BP2-201ENST00000394154 NCOA3Q9Y6Q9 1424 aa17.26■□□□□ 0.35
VTI1BP2-201ENST00000394154 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
VTI1BP2-201ENST00000394154 CHD2O14647 1828 aaKnown RBP17.24■□□□□ 0.35
VTI1BP2-201ENST00000394154 NUTM2BA6NNL0 878 aaPredicted RBP17.24■□□□□ 0.35
VTI1BP2-201ENST00000394154 NUTM2EB1AL46 878 aaPredicted RBP17.24■□□□□ 0.35
VTI1BP2-201ENST00000394154 ADRA2BP18089 450 aa17.24■□□□□ 0.35
VTI1BP2-201ENST00000394154 RBM6P78332 1123 aaKnown RBP17.24■□□□□ 0.35
VTI1BP2-201ENST00000394154 NUTM2DQ5VT03 806 aaPredicted RBP17.24■□□□□ 0.35
VTI1BP2-201ENST00000394154 NUTM2AQ8IVF1 878 aaPredicted RBP17.24■□□□□ 0.35
VTI1BP2-201ENST00000394154 DUOX2Q9NRD8 1548 aa17.23■□□□□ 0.35
VTI1BP2-201ENST00000394154 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
VTI1BP2-201ENST00000394154 SETBP1Q9Y6X0 1596 aa17.21■□□□□ 0.35
VTI1BP2-201ENST00000394154 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
VTI1BP2-201ENST00000394154 BCANQ96GW7 911 aa17.21■□□□□ 0.35
VTI1BP2-201ENST00000394154 ADGRB3O60242 1522 aa17.21■□□□□ 0.34
VTI1BP2-201ENST00000394154 IDI1Q13907 227 aa17.2■□□□□ 0.34
VTI1BP2-201ENST00000394154 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
VTI1BP2-201ENST00000394154 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.2■□□□□ 0.34
VTI1BP2-201ENST00000394154 C14orf37Q86TY3 774 aa17.19■□□□□ 0.34
VTI1BP2-201ENST00000394154 ATF3P18847 181 aa17.18■□□□□ 0.34
VTI1BP2-201ENST00000394154 PLEKHG1Q9ULL1 1385 aa17.16■□□□□ 0.34
VTI1BP2-201ENST00000394154 NGLY1Q96IV0 654 aa17.16■□□□□ 0.34
VTI1BP2-201ENST00000394154 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
VTI1BP2-201ENST00000394154 ERBINQ96RT1 1412 aa17.15■□□□□ 0.34
VTI1BP2-201ENST00000394154 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
VTI1BP2-201ENST00000394154 C8orf37Q96NL8 207 aa17.15■□□□□ 0.34
VTI1BP2-201ENST00000394154 KANK1Q14678 1352 aa17.15■□□□□ 0.34
VTI1BP2-201ENST00000394154 BRINP3Q76B58 766 aa17.14■□□□□ 0.33
VTI1BP2-201ENST00000394154 LMTK2Q8IWU2 1503 aa17.12■□□□□ 0.33
VTI1BP2-201ENST00000394154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
VTI1BP2-201ENST00000394154 KIF15Q9NS87 1388 aa17.12■□□□□ 0.33
VTI1BP2-201ENST00000394154 ZFYVE9O95405 1425 aa17.12■□□□□ 0.33
VTI1BP2-201ENST00000394154 NOS1P29475 1434 aa17.12■□□□□ 0.33
VTI1BP2-201ENST00000394154 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
VTI1BP2-201ENST00000394154 NHSL1Q5SYE7 1610 aa17.11■□□□□ 0.33
VTI1BP2-201ENST00000394154 TBX22Q9Y458 520 aa17.11■□□□□ 0.33
VTI1BP2-201ENST00000394154 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
VTI1BP2-201ENST00000394154 LRRC59Q96AG4 307 aaKnown RBP17.1■□□□□ 0.33
VTI1BP2-201ENST00000394154 SLC52A1Q9NWF4 448 aa17.1■□□□□ 0.33
VTI1BP2-201ENST00000394154 EP400Q96L91 3159 aa17.1■□□□□ 0.33
VTI1BP2-201ENST00000394154 PPP1R15AO75807 674 aaPredicted RBP17.09■□□□□ 0.33
VTI1BP2-201ENST00000394154 HDGFP51858 240 aaKnown RBP17.09■□□□□ 0.33
VTI1BP2-201ENST00000394154 DCCP43146 1447 aa17.09■□□□□ 0.33
VTI1BP2-201ENST00000394154 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
VTI1BP2-201ENST00000394154 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
VTI1BP2-201ENST00000394154 MYOM3Q5VTT5 1437 aa17.06■□□□□ 0.32
VTI1BP2-201ENST00000394154 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
VTI1BP2-201ENST00000394154 MYO5BQ9ULV0 1848 aa17.06■□□□□ 0.32
VTI1BP2-201ENST00000394154 LRP5O75197 1615 aa17.05■□□□□ 0.32
VTI1BP2-201ENST00000394154 RRP7BPQ9NSQ0 103 aa17.04■□□□□ 0.32
VTI1BP2-201ENST00000394154 TRPC5Q9UL62 973 aaPredicted RBP17.04■□□□□ 0.32
VTI1BP2-201ENST00000394154 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
VTI1BP2-201ENST00000394154 CROCC2H7BZ55 1655 aa17.04■□□□□ 0.32
VTI1BP2-201ENST00000394154 GCC2Q8IWJ2 1684 aa17.04■□□□□ 0.32
VTI1BP2-201ENST00000394154 ADAMTS13Q76LX8 1427 aa17.03■□□□□ 0.32
VTI1BP2-201ENST00000394154 ADAMTS2O95450 1211 aa17.02■□□□□ 0.32
VTI1BP2-201ENST00000394154 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.02■□□□□ 0.32
VTI1BP2-201ENST00000394154 USP21Q9UK80 565 aa17.02■□□□□ 0.32
VTI1BP2-201ENST00000394154 MST1RQ04912 1400 aa17.02■□□□□ 0.31
VTI1BP2-201ENST00000394154 TMEM131LA2VDJ0 1609 aa17.01■□□□□ 0.31
VTI1BP2-201ENST00000394154 TRPM2O94759 1503 aa17.01■□□□□ 0.31
VTI1BP2-201ENST00000394154 RPRD2Q5VT52 1461 aaKnown RBP17■□□□□ 0.31
VTI1BP2-201ENST00000394154 ATRNO75882 1429 aa16.99■□□□□ 0.31
VTI1BP2-201ENST00000394154 AMOTL2Q9Y2J4 779 aa16.98■□□□□ 0.31
VTI1BP2-201ENST00000394154 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
VTI1BP2-201ENST00000394154 ABCC5O15440 1437 aa16.96■□□□□ 0.31
VTI1BP2-201ENST00000394154 PTCH1Q13635 1447 aa16.96■□□□□ 0.31
VTI1BP2-201ENST00000394154 APLP2Q06481 763 aa16.96■□□□□ 0.31
VTI1BP2-201ENST00000394154 DDX17Q92841 729 aaKnown RBP16.95■□□□□ 0.3
VTI1BP2-201ENST00000394154 BLMP54132 1417 aaPredicted RBP16.95■□□□□ 0.3
VTI1BP2-201ENST00000394154 PTPRUQ92729 1446 aa16.95■□□□□ 0.3
VTI1BP2-201ENST00000394154 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
VTI1BP2-201ENST00000394154 LAMC1P11047 1609 aa16.92■□□□□ 0.3
VTI1BP2-201ENST00000394154 DAPK1P53355 1430 aa16.91■□□□□ 0.3
VTI1BP2-201ENST00000394154 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
VTI1BP2-201ENST00000394154 UNC13BO14795 1591 aa16.9■□□□□ 0.3
VTI1BP2-201ENST00000394154 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
VTI1BP2-201ENST00000394154 ADGRL3Q9HAR2 1447 aa16.89■□□□□ 0.29
VTI1BP2-201ENST00000394154 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
VTI1BP2-201ENST00000394154 PTPN23Q9H3S7 1636 aa16.88■□□□□ 0.29
VTI1BP2-201ENST00000394154 SF3B2Q13435 895 aaKnown RBP16.87■□□□□ 0.29
VTI1BP2-201ENST00000394154 DEFB132Q7Z7B7 95 aa16.87■□□□□ 0.29
VTI1BP2-201ENST00000394154 SOS2Q07890 1332 aaPredicted RBP16.87■□□□□ 0.29
VTI1BP2-201ENST00000394154 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
VTI1BP2-201ENST00000394154 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
VTI1BP2-201ENST00000394154 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
VTI1BP2-201ENST00000394154 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
VTI1BP2-201ENST00000394154 SPHKAPQ2M3C7 1700 aa16.85■□□□□ 0.29
VTI1BP2-201ENST00000394154 C1orf167Q5SNV9 1468 aa16.85■□□□□ 0.29
VTI1BP2-201ENST00000394154 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
VTI1BP2-201ENST00000394154 MYOM2P54296 1465 aa16.83■□□□□ 0.28
VTI1BP2-201ENST00000394154 PPARGC1BQ86YN6 1023 aaKnown RBP16.83■□□□□ 0.28
VTI1BP2-201ENST00000394154 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.83■□□□□ 0.28
VTI1BP2-201ENST00000394154 NRXN3Q9Y4C0 1643 aa16.83■□□□□ 0.28
VTI1BP2-201ENST00000394154 HRCP23327 699 aa16.82■□□□□ 0.28
VTI1BP2-201ENST00000394154 KANK4Q5T7N3 995 aaPredicted RBP16.82■□□□□ 0.28
VTI1BP2-201ENST00000394154 CHIC2Q9UKJ5 165 aa16.82■□□□□ 0.28
VTI1BP2-201ENST00000394154 BRWD3Q6RI45 1802 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms