RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 TTC37Q6PGP7 1564 aa18.75■□□□□ 0.59
SFXN3-202ENST00000393459 PER1O15534 1290 aaPredicted RBP18.75■□□□□ 0.59
SFXN3-202ENST00000393459 KNSTRNQ9Y448 316 aa18.75■□□□□ 0.59
SFXN3-202ENST00000393459 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
SFXN3-202ENST00000393459 ARHGAP5Q13017 1502 aa18.74■□□□□ 0.59
SFXN3-202ENST00000393459 DISP3Q9P2K9 1392 aa18.74■□□□□ 0.59
SFXN3-202ENST00000393459 PZPP20742 1482 aa18.73■□□□□ 0.59
SFXN3-202ENST00000393459 PLEKHH2Q8IVE3 1493 aa18.73■□□□□ 0.59
SFXN3-202ENST00000393459 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
SFXN3-202ENST00000393459 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
SFXN3-202ENST00000393459 KIAA1107Q9UPP5 1409 aa18.72■□□□□ 0.59
SFXN3-202ENST00000393459 FAM43AQ8N2R8 423 aa18.72■□□□□ 0.59
SFXN3-202ENST00000393459 MYO5CQ9NQX4 1742 aa18.72■□□□□ 0.59
SFXN3-202ENST00000393459 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.71■□□□□ 0.59
SFXN3-202ENST00000393459 PKNOX2Q96KN3 472 aa18.7■□□□□ 0.58
SFXN3-202ENST00000393459 MFAP1P55081 439 aaKnown RBP18.69■□□□□ 0.58
SFXN3-202ENST00000393459 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
SFXN3-202ENST00000393459 PLCH2O75038 1416 aa18.68■□□□□ 0.58
SFXN3-202ENST00000393459 SYCP2Q9BX26 1530 aa18.68■□□□□ 0.58
SFXN3-202ENST00000393459 PPP2R1AP30153 589 aa18.67■□□□□ 0.58
SFXN3-202ENST00000393459 XRCC6P12956 609 aaKnown RBP eCLIP18.66■□□□□ 0.58
SFXN3-202ENST00000393459 MAST1Q9Y2H9 1570 aa18.66■□□□□ 0.58
SFXN3-202ENST00000393459 BECN1Q14457 450 aa18.66■□□□□ 0.58
SFXN3-202ENST00000393459 EFCAB2Q5VUJ9 269 aa18.65■□□□□ 0.58
SFXN3-202ENST00000393459 OSCARQ8IYS5 282 aa18.65■□□□□ 0.58
SFXN3-202ENST00000393459 KDM5DQ9BY66 1539 aa18.65■□□□□ 0.58
SFXN3-202ENST00000393459 TMF1P82094 1093 aa18.64■□□□□ 0.57
SFXN3-202ENST00000393459 PARD3Q8TEW0 1356 aa18.64■□□□□ 0.57
SFXN3-202ENST00000393459 GOLGA6L3A6NEY3 463 aa18.64■□□□□ 0.57
SFXN3-202ENST00000393459 USP19O94966 1318 aa18.64■□□□□ 0.57
SFXN3-202ENST00000393459 ZMYND15Q9H091 742 aa18.63■□□□□ 0.57
SFXN3-202ENST00000393459 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
SFXN3-202ENST00000393459 UPF2Q9HAU5 1272 aaKnown RBP18.62■□□□□ 0.57
SFXN3-202ENST00000393459 KDM5CP41229 1560 aa18.61■□□□□ 0.57
SFXN3-202ENST00000393459 HSP90AA2PQ14568 343 aaPredicted RBP18.61■□□□□ 0.57
SFXN3-202ENST00000393459 ARAP3Q8WWN8 1544 aa18.61■□□□□ 0.57
SFXN3-202ENST00000393459 WDR7Q9Y4E6 1490 aa18.61■□□□□ 0.57
SFXN3-202ENST00000393459 TESK2Q96S53 571 aa18.59■□□□□ 0.57
SFXN3-202ENST00000393459 PLXNC1O60486 1568 aa18.59■□□□□ 0.57
SFXN3-202ENST00000393459 SLFN5Q08AF3 891 aa18.58■□□□□ 0.57
SFXN3-202ENST00000393459 HSP90AA1P07900 732 aaKnown RBP18.57■□□□□ 0.56
SFXN3-202ENST00000393459 RLBP1P12271 317 aa18.57■□□□□ 0.56
SFXN3-202ENST00000393459 PCDHB15Q9Y5E8 787 aa18.57■□□□□ 0.56
SFXN3-202ENST00000393459 ABCC1P33527 1531 aa18.56■□□□□ 0.56
SFXN3-202ENST00000393459 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
SFXN3-202ENST00000393459 PDZRN3Q9UPQ7 1066 aa18.56■□□□□ 0.56
SFXN3-202ENST00000393459 CENPJQ9HC77 1338 aaPredicted RBP18.54■□□□□ 0.56
SFXN3-202ENST00000393459 L1TD1Q5T7N2 865 aaKnown RBP18.54■□□□□ 0.56
SFXN3-202ENST00000393459 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
SFXN3-202ENST00000393459 UHRF1BP1Q6BDS2 1440 aa18.53■□□□□ 0.56
SFXN3-202ENST00000393459 TRAK2O60296 914 aa18.53■□□□□ 0.56
SFXN3-202ENST00000393459 FAM135AQ9P2D6 1515 aa18.52■□□□□ 0.56
SFXN3-202ENST00000393459 TPRNQ4KMQ1 711 aa18.52■□□□□ 0.56
SFXN3-202ENST00000393459 RALGAPBQ86X10 1494 aa18.52■□□□□ 0.56
SFXN3-202ENST00000393459 CCDC144AA2RUR9 1427 aa18.52■□□□□ 0.55
SFXN3-202ENST00000393459 ERBINQ96RT1 1412 aa18.51■□□□□ 0.55
SFXN3-202ENST00000393459 NPM1P06748 294 aaKnown RBP eCLIP18.51■□□□□ 0.55
SFXN3-202ENST00000393459 RBM10P98175 930 aaKnown RBP18.51■□□□□ 0.55
SFXN3-202ENST00000393459 UNC13BO14795 1591 aa18.51■□□□□ 0.55
SFXN3-202ENST00000393459 MCM4P33991 863 aa18.51■□□□□ 0.55
SFXN3-202ENST00000393459 ABCA9Q8IUA7 1624 aa18.5■□□□□ 0.55
SFXN3-202ENST00000393459 ASXL2Q76L83 1435 aa18.5■□□□□ 0.55
SFXN3-202ENST00000393459 GLIPR1L2Q4G1C9 344 aa18.5■□□□□ 0.55
SFXN3-202ENST00000393459 TRIM44Q96DX7 344 aaPredicted RBP18.5■□□□□ 0.55
SFXN3-202ENST00000393459 TRAPPC8Q9Y2L5 1435 aa18.49■□□□□ 0.55
SFXN3-202ENST00000393459 MYH16Q9H6N6 1097 aa18.49■□□□□ 0.55
SFXN3-202ENST00000393459 RTEL1-TNFRSF6BF6WH68 1400 aa18.49■□□□□ 0.55
SFXN3-202ENST00000393459 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
SFXN3-202ENST00000393459 SPAG9O60271 1321 aaKnown RBP18.47■□□□□ 0.55
SFXN3-202ENST00000393459 FANCAO15360 1455 aa18.47■□□□□ 0.55
SFXN3-202ENST00000393459 CHGAP10645 457 aaKnown RBP18.47■□□□□ 0.55
SFXN3-202ENST00000393459 NCLP19338 710 aaKnown RBP18.47■□□□□ 0.55
SFXN3-202ENST00000393459 TSR2Q969E8 191 aaKnown RBP18.46■□□□□ 0.55
SFXN3-202ENST00000393459 ANTXR1Q9H6X2 564 aa18.46■□□□□ 0.55
SFXN3-202ENST00000393459 AMER1Q5JTC6 1135 aaPredicted RBP18.46■□□□□ 0.54
SFXN3-202ENST00000393459 FTSJ3Q8IY81 847 aaKnown RBP18.46■□□□□ 0.54
SFXN3-202ENST00000393459 C22orf23Q9BZE7 217 aa18.45■□□□□ 0.54
SFXN3-202ENST00000393459 IQGAP3Q86VI3 1631 aa18.44■□□□□ 0.54
SFXN3-202ENST00000393459 MAGI2Q86UL8 1455 aa18.43■□□□□ 0.54
SFXN3-202ENST00000393459 BLMP54132 1417 aaPredicted RBP18.43■□□□□ 0.54
SFXN3-202ENST00000393459 E9PSI1 815 aa18.43■□□□□ 0.54
SFXN3-202ENST00000393459 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
SFXN3-202ENST00000393459 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
SFXN3-202ENST00000393459 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
SFXN3-202ENST00000393459 GAS2L3Q86XJ1 694 aa18.42■□□□□ 0.54
SFXN3-202ENST00000393459 ITPRIPQ8IWB1 547 aa18.42■□□□□ 0.54
SFXN3-202ENST00000393459 WWC1Q8IX03 1113 aa18.42■□□□□ 0.54
SFXN3-202ENST00000393459 MPNDQ8N594 471 aa18.42■□□□□ 0.54
SFXN3-202ENST00000393459 GRPEL1Q9HAV7 217 aa18.41■□□□□ 0.54
SFXN3-202ENST00000393459 ZFYVE16Q7Z3T8 1539 aa18.41■□□□□ 0.54
SFXN3-202ENST00000393459 LNPKQ9C0E8 428 aa18.41■□□□□ 0.54
SFXN3-202ENST00000393459 ADGRL1O94910 1474 aa18.4■□□□□ 0.54
SFXN3-202ENST00000393459 E9PCH4 1651 aa18.4■□□□□ 0.54
SFXN3-202ENST00000393459 ESPNB1AK53 854 aa18.4■□□□□ 0.54
SFXN3-202ENST00000393459 NUTM2DQ5VT03 806 aaPredicted RBP18.4■□□□□ 0.54
SFXN3-202ENST00000393459 FOXD4L5Q5VV16 416 aaPredicted RBP18.4■□□□□ 0.54
SFXN3-202ENST00000393459 FOXD4L4Q8WXT5 416 aaPredicted RBP18.4■□□□□ 0.54
SFXN3-202ENST00000393459 CGNL1Q0VF96 1302 aa18.4■□□□□ 0.54
SFXN3-202ENST00000393459 ZMYM4Q5VZL5 1548 aa18.4■□□□□ 0.54
SFXN3-202ENST00000393459 MAPK8IP3Q9UPT6 1336 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms