RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 STK25O00506 426 aa12.68□□□□□ -0.38
CASP4-201ENST00000393150 KIF3BO15066 747 aa12.68□□□□□ -0.38
CASP4-201ENST00000393150 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.68□□□□□ -0.38
CASP4-201ENST00000393150 CASKIN1Q8WXD9 1431 aa12.67□□□□□ -0.38
CASP4-201ENST00000393150 SYCP2Q9BX26 1530 aa12.67□□□□□ -0.38
CASP4-201ENST00000393150 NPHP4O75161 1426 aaPredicted RBP12.66□□□□□ -0.38
CASP4-201ENST00000393150 FBXO31Q5XUX0 539 aaPredicted RBP12.66□□□□□ -0.38
CASP4-201ENST00000393150 ZNF467Q7Z7K2 595 aaPredicted RBP12.66□□□□□ -0.38
CASP4-201ENST00000393150 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
CASP4-201ENST00000393150 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
CASP4-201ENST00000393150 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
CASP4-201ENST00000393150 RSPH4AQ5TD94 716 aa12.65□□□□□ -0.38
CASP4-201ENST00000393150 KIF12Q96FN5 646 aa12.65□□□□□ -0.38
CASP4-201ENST00000393150 BCL11BQ9C0K0 894 aaPredicted RBP12.65□□□□□ -0.38
CASP4-201ENST00000393150 PAK3O75914 559 aaPredicted RBP12.64□□□□□ -0.39
CASP4-201ENST00000393150 GPATCH8Q9UKJ3 1502 aaKnown RBP12.64□□□□□ -0.39
CASP4-201ENST00000393150 NLRP1Q9C000 1473 aa12.63□□□□□ -0.39
CASP4-201ENST00000393150 MTUS2Q5JR59 1369 aa12.63□□□□□ -0.39
CASP4-201ENST00000393150 DHX29Q7Z478 1369 aaKnown RBP12.63□□□□□ -0.39
CASP4-201ENST00000393150 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
CASP4-201ENST00000393150 POLR1AO95602 1720 aaPredicted RBP12.63□□□□□ -0.39
CASP4-201ENST00000393150 MIA2Q96PC5 1412 aa12.63□□□□□ -0.39
CASP4-201ENST00000393150 MAP3K13O43283 966 aa12.62□□□□□ -0.39
CASP4-201ENST00000393150 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
CASP4-201ENST00000393150 EID1Q9Y6B2 187 aa12.62□□□□□ -0.39
CASP4-201ENST00000393150 STK24Q9Y6E0 443 aa12.62□□□□□ -0.39
CASP4-201ENST00000393150 CDC42BPAQ5VT25 1732 aa12.62□□□□□ -0.39
CASP4-201ENST00000393150 PLXNC1O60486 1568 aa12.62□□□□□ -0.39
CASP4-201ENST00000393150 TSPY4P0CV99 314 aa12.62□□□□□ -0.39
CASP4-201ENST00000393150 TSPY10P0CW01 314 aa12.62□□□□□ -0.39
CASP4-201ENST00000393150 RTEL1-TNFRSF6BF6WH68 1400 aa12.61□□□□□ -0.39
CASP4-201ENST00000393150 ADGBQ8N7X0 1667 aa12.61□□□□□ -0.39
CASP4-201ENST00000393150 UGGT1Q9NYU2 1555 aa12.61□□□□□ -0.39
CASP4-201ENST00000393150 GTPBP6O43824 516 aaPredicted RBP12.61□□□□□ -0.39
CASP4-201ENST00000393150 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
CASP4-201ENST00000393150 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
CASP4-201ENST00000393150 MED14O60244 1454 aa12.6□□□□□ -0.39
CASP4-201ENST00000393150 PZPP20742 1482 aa12.6□□□□□ -0.39
CASP4-201ENST00000393150 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
CASP4-201ENST00000393150 PDAP1Q13442 181 aaKnown RBP12.6□□□□□ -0.39
CASP4-201ENST00000393150 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
CASP4-201ENST00000393150 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
CASP4-201ENST00000393150 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
CASP4-201ENST00000393150 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
CASP4-201ENST00000393150 KDM5DQ9BY66 1539 aa12.58□□□□□ -0.4
CASP4-201ENST00000393150 TXNDC2Q86VQ3 553 aa12.58□□□□□ -0.4
CASP4-201ENST00000393150 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
CASP4-201ENST00000393150 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
CASP4-201ENST00000393150 VWDEQ8N2E2 1590 aa12.57□□□□□ -0.4
CASP4-201ENST00000393150 NEURL4Q96JN8 1562 aa12.57□□□□□ -0.4
CASP4-201ENST00000393150 INO80Q9ULG1 1556 aaPredicted RBP12.57□□□□□ -0.4
CASP4-201ENST00000393150 DEPDC5O75140 1603 aa12.57□□□□□ -0.4
CASP4-201ENST00000393150 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
CASP4-201ENST00000393150 PSEN1P49768 467 aa12.56□□□□□ -0.4
CASP4-201ENST00000393150 POTEAQ6S8J7 498 aa12.56□□□□□ -0.4
CASP4-201ENST00000393150 RNF17Q9BXT8 1623 aaKnown RBP12.56□□□□□ -0.4
CASP4-201ENST00000393150 MEX3CQ5U5Q3 659 aaKnown RBP12.55□□□□□ -0.4
CASP4-201ENST00000393150 LRRIQ1Q96JM4 1722 aa12.55□□□□□ -0.4
CASP4-201ENST00000393150 FAM135BQ49AJ0 1406 aa12.54□□□□□ -0.4
CASP4-201ENST00000393150 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
CASP4-201ENST00000393150 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
CASP4-201ENST00000393150 SYNMO15061 1565 aa12.53□□□□□ -0.4
CASP4-201ENST00000393150 ZNF772Q68DY9 489 aaPredicted RBP12.52□□□□□ -0.41
CASP4-201ENST00000393150 PROSER2Q86WR7 435 aaPredicted RBP12.52□□□□□ -0.41
CASP4-201ENST00000393150 BCANQ96GW7 911 aa12.52□□□□□ -0.41
CASP4-201ENST00000393150 SCAF11Q99590 1463 aaKnown RBP12.5□□□□□ -0.41
CASP4-201ENST00000393150 GABBR2O75899 941 aa12.5□□□□□ -0.41
CASP4-201ENST00000393150 CCDC141Q6ZP82 1450 aa12.49□□□□□ -0.41
CASP4-201ENST00000393150 MBD5Q9P267 1494 aa12.49□□□□□ -0.41
CASP4-201ENST00000393150 ALKQ9UM73 1620 aa12.48□□□□□ -0.41
CASP4-201ENST00000393150 JCADQ9P266 1359 aa12.47□□□□□ -0.41
CASP4-201ENST00000393150 KCNA6P17658 529 aa12.47□□□□□ -0.41
CASP4-201ENST00000393150 MSH6P52701 1360 aa12.47□□□□□ -0.41
CASP4-201ENST00000393150 TRIM52Q96A61 297 aa12.46□□□□□ -0.41
CASP4-201ENST00000393150 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.41
CASP4-201ENST00000393150 TMEM94Q12767 1356 aa12.46□□□□□ -0.42
CASP4-201ENST00000393150 RXRBP28702 533 aa12.45□□□□□ -0.42
CASP4-201ENST00000393150 LTKP29376 864 aa12.45□□□□□ -0.42
CASP4-201ENST00000393150 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
CASP4-201ENST00000393150 UPF1Q92900 1129 aaKnown RBP eCLIP12.45□□□□□ -0.42
CASP4-201ENST00000393150 SLAIN2Q9P270 581 aa12.45□□□□□ -0.42
CASP4-201ENST00000393150 C14orf37Q86TY3 774 aa12.44□□□□□ -0.42
CASP4-201ENST00000393150 MS4A3Q96HJ5 214 aa12.44□□□□□ -0.42
CASP4-201ENST00000393150 TRPC6Q9Y210 931 aa12.44□□□□□ -0.42
CASP4-201ENST00000393150 CEP162Q5TB80 1403 aa12.43□□□□□ -0.42
CASP4-201ENST00000393150 ERVK-7P63135 1459 aa12.43□□□□□ -0.42
CASP4-201ENST00000393150 SPATA31A6Q5VVP1 1343 aa12.43□□□□□ -0.42
CASP4-201ENST00000393150 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
CASP4-201ENST00000393150 MFRPQ9BY79 579 aa12.41□□□□□ -0.42
CASP4-201ENST00000393150 KANK1Q14678 1352 aa12.41□□□□□ -0.42
CASP4-201ENST00000393150 TIAM1Q13009 1591 aa12.41□□□□□ -0.42
CASP4-201ENST00000393150 LHX8Q68G74 356 aa12.4□□□□□ -0.42
CASP4-201ENST00000393150 SLC26A8Q96RN1 970 aa12.4□□□□□ -0.42
CASP4-201ENST00000393150 TMEM2Q9UHN6 1383 aa12.4□□□□□ -0.42
CASP4-201ENST00000393150 CAMSAP2Q08AD1 1489 aa12.4□□□□□ -0.42
CASP4-201ENST00000393150 STRCP1A6NGW2 1772 aa12.4□□□□□ -0.42
CASP4-201ENST00000393150 EFCAB3Q8N7B9 438 aa12.39□□□□□ -0.43
CASP4-201ENST00000393150 RYDENQ9NUL5 291 aaKnown RBP12.39□□□□□ -0.43
CASP4-201ENST00000393150 ZC3H13Q5T200 1668 aaKnown RBP12.39□□□□□ -0.43
CASP4-201ENST00000393150 ABCC3O15438 1527 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms