RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
PDCD4-202ENST00000393104 LAMC1P11047 1609 aa15.27■□□□□ 0.04
PDCD4-202ENST00000393104 PLIN1O60240 522 aa15.27■□□□□ 0.03
PDCD4-202ENST00000393104 C20orf194Q5TEA3 1177 aa15.27■□□□□ 0.03
PDCD4-202ENST00000393104 LAS1LQ9Y4W2 734 aaKnown RBP15.27■□□□□ 0.03
PDCD4-202ENST00000393104 MS4A1P11836 297 aa15.26■□□□□ 0.03
PDCD4-202ENST00000393104 ZC3H13Q5T200 1668 aaKnown RBP15.26■□□□□ 0.03
PDCD4-202ENST00000393104 TMC1Q8TDI8 760 aa15.26■□□□□ 0.03
PDCD4-202ENST00000393104 PRAG1Q86YV5 1406 aa15.25■□□□□ 0.03
PDCD4-202ENST00000393104 DIP2CQ9Y2E4 1556 aa15.25■□□□□ 0.03
PDCD4-202ENST00000393104 INSRP06213 1382 aa15.25■□□□□ 0.03
PDCD4-202ENST00000393104 COL17A1Q9UMD9 1497 aaPredicted RBP15.24■□□□□ 0.03
PDCD4-202ENST00000393104 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
PDCD4-202ENST00000393104 TESK2Q96S53 571 aa15.23■□□□□ 0.03
PDCD4-202ENST00000393104 GPRASP1Q5JY77 1395 aa15.23■□□□□ 0.03
PDCD4-202ENST00000393104 RALBP1Q15311 655 aa15.23■□□□□ 0.03
PDCD4-202ENST00000393104 DISP3Q9P2K9 1392 aa15.23■□□□□ 0.03
PDCD4-202ENST00000393104 ZNF326Q5BKZ1 582 aaKnown RBP15.22■□□□□ 0.03
PDCD4-202ENST00000393104 USP35Q9P2H5 1018 aa15.22■□□□□ 0.03
PDCD4-202ENST00000393104 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.03
PDCD4-202ENST00000393104 CARD11Q9BXL7 1154 aa15.21■□□□□ 0.03
PDCD4-202ENST00000393104 SPHKAPQ2M3C7 1700 aa15.21■□□□□ 0.03
PDCD4-202ENST00000393104 NEFMP07197 916 aa15.21■□□□□ 0.03
PDCD4-202ENST00000393104 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
PDCD4-202ENST00000393104 RTN4Q9NQC3 1192 aaKnown RBP15.21■□□□□ 0.03
PDCD4-202ENST00000393104 A2MP01023 1474 aa15.2■□□□□ 0.02
PDCD4-202ENST00000393104 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
PDCD4-202ENST00000393104 CRBNQ96SW2 442 aa15.2■□□□□ 0.02
PDCD4-202ENST00000393104 CEP152O94986 1710 aa15.2■□□□□ 0.02
PDCD4-202ENST00000393104 NBPF1Q3BBV0 1214 aa15.2■□□□□ 0.02
PDCD4-202ENST00000393104 C8orf34Q49A92 452 aa15.2■□□□□ 0.02
PDCD4-202ENST00000393104 BRPF3Q9ULD4 1205 aa15.2■□□□□ 0.02
PDCD4-202ENST00000393104 POLR3GLQ9BT43 218 aa15.19■□□□□ 0.02
PDCD4-202ENST00000393104 PLEKHH1Q9ULM0 1364 aa15.18■□□□□ 0.02
PDCD4-202ENST00000393104 TRPM2O94759 1503 aa15.18■□□□□ 0.02
PDCD4-202ENST00000393104 AGLP35573 1532 aa15.18■□□□□ 0.02
PDCD4-202ENST00000393104 NLRP13Q86W25 1043 aa15.18■□□□□ 0.02
PDCD4-202ENST00000393104 NUP155O75694 1391 aa15.17■□□□□ 0.02
PDCD4-202ENST00000393104 CYB5RLQ6IPT4 315 aa15.17■□□□□ 0.02
PDCD4-202ENST00000393104 EFCAB6Q5THR3 1501 aa15.17■□□□□ 0.02
PDCD4-202ENST00000393104 PDE3BQ13370 1112 aa15.17■□□□□ 0.02
PDCD4-202ENST00000393104 MYOM1P52179 1685 aa15.17■□□□□ 0.02
PDCD4-202ENST00000393104 PTPRTO14522 1441 aa15.16■□□□□ 0.02
PDCD4-202ENST00000393104 SLC4A3P48751 1232 aa15.16■□□□□ 0.02
PDCD4-202ENST00000393104 ARHGEF40Q8TER5 1519 aa15.15■□□□□ 0.02
PDCD4-202ENST00000393104 USP19O94966 1318 aa15.15■□□□□ 0.02
PDCD4-202ENST00000393104 NFKBIBQ15653 356 aa15.14■□□□□ 0.01
PDCD4-202ENST00000393104 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
PDCD4-202ENST00000393104 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
PDCD4-202ENST00000393104 RTL5Q5HYW3 569 aaPredicted RBP15.13■□□□□ 0.01
PDCD4-202ENST00000393104 CAMSAP1Q5T5Y3 1602 aa15.12■□□□□ 0.01
PDCD4-202ENST00000393104 DUSP27Q5VZP5 1158 aa15.12■□□□□ 0.01
PDCD4-202ENST00000393104 IQGAP1P46940 1657 aa15.12■□□□□ 0.01
PDCD4-202ENST00000393104 TSPOAP1O95153 1857 aa15.12■□□□□ 0.01
PDCD4-202ENST00000393104 KDM2AQ9Y2K7 1162 aa15.12■□□□□ 0.01
PDCD4-202ENST00000393104 FRAT1Q92837 279 aaPredicted RBP15.11■□□□□ 0.01
PDCD4-202ENST00000393104 AFAP1Q8N556 730 aa15.1■□□□□ 0.01
PDCD4-202ENST00000393104 IFT172Q9UG01 1749 aa15.1■□□□□ 0.01
PDCD4-202ENST00000393104 TRMT2AQ8IZ69 625 aaKnown RBP15.1■□□□□ 0.01
PDCD4-202ENST00000393104 GSE1Q14687 1217 aa15.1■□□□□ 0.01
PDCD4-202ENST00000393104 ABCC3O15438 1527 aa15.09■□□□□ 0.01
PDCD4-202ENST00000393104 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.09■□□□□ 0.01
PDCD4-202ENST00000393104 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0.01
PDCD4-202ENST00000393104 PIK3C2BO00750 1634 aa15.08■□□□□ 0.01
PDCD4-202ENST00000393104 ADAMTS8Q9UP79 889 aa15.08■□□□□ 0
PDCD4-202ENST00000393104 ARHGAP31Q2M1Z3 1444 aa15.07■□□□□ 0
PDCD4-202ENST00000393104 CLTCL1P53675 1640 aa15.07■□□□□ 0
PDCD4-202ENST00000393104 KANK1Q14678 1352 aa15.07■□□□□ 0
PDCD4-202ENST00000393104 KIAA1210Q9ULL0 1709 aa15.07■□□□□ 0
PDCD4-202ENST00000393104 MADDQ8WXG6 1647 aa15.06■□□□□ 0
PDCD4-202ENST00000393104 PPM1GO15355 546 aaPredicted RBP15.06■□□□□ 0
PDCD4-202ENST00000393104 PANK3Q9H999 370 aa15.06■□□□□ 0
PDCD4-202ENST00000393104 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ -0
PDCD4-202ENST00000393104 KIF1BO60333 1816 aa15.04■□□□□ -0
PDCD4-202ENST00000393104 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
PDCD4-202ENST00000393104 FAM69CQ0P6D2 419 aa15.03■□□□□ -0
PDCD4-202ENST00000393104 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
PDCD4-202ENST00000393104 SIGLEC1Q9BZZ2 1709 aa15.03■□□□□ -0
PDCD4-202ENST00000393104 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
PDCD4-202ENST00000393104 MROH2AA6NES4 1674 aa15.02□□□□□ -0.01
PDCD4-202ENST00000393104 SEC24BO95487 1268 aa15.02□□□□□ -0.01
PDCD4-202ENST00000393104 CCDC144AA2RUR9 1427 aa15□□□□□ -0.01
PDCD4-202ENST00000393104 ADGRB3O60242 1522 aa15□□□□□ -0.01
PDCD4-202ENST00000393104 SYNMO15061 1565 aa15□□□□□ -0.01
PDCD4-202ENST00000393104 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
PDCD4-202ENST00000393104 PREX1Q8TCU6 1659 aa14.99□□□□□ -0.01
PDCD4-202ENST00000393104 IGHDP01880 384 aa14.99□□□□□ -0.01
PDCD4-202ENST00000393104 CENPQQ7L2Z9 268 aaPredicted RBP14.99□□□□□ -0.01
PDCD4-202ENST00000393104 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
PDCD4-202ENST00000393104 SHPRHQ149N8 1683 aa14.98□□□□□ -0.01
PDCD4-202ENST00000393104 PPP2R1AP30153 589 aa14.98□□□□□ -0.01
PDCD4-202ENST00000393104 NOS1P29475 1434 aa14.98□□□□□ -0.01
PDCD4-202ENST00000393104 FAM161AQ3B820 660 aa14.98□□□□□ -0.01
PDCD4-202ENST00000393104 MYOM2P54296 1465 aa14.98□□□□□ -0.01
PDCD4-202ENST00000393104 SLFN5Q08AF3 891 aa14.98□□□□□ -0.01
PDCD4-202ENST00000393104 STAC3Q96MF2 364 aa14.97□□□□□ -0.01
PDCD4-202ENST00000393104 KDM5AP29375 1690 aaKnown RBP14.97□□□□□ -0.01
PDCD4-202ENST00000393104 PPLO60437 1756 aa14.96□□□□□ -0.01
PDCD4-202ENST00000393104 DDRGK1Q96HY6 314 aa14.96□□□□□ -0.01
PDCD4-202ENST00000393104 ANTXR1Q9H6X2 564 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms