RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 IDI1Q13907 227 aa19.48■□□□□ 0.71
USP44-202ENST00000393091 TIMELESSQ9UNS1 1208 aa19.47■□□□□ 0.71
USP44-202ENST00000393091 TMEM2Q9UHN6 1383 aa19.45■□□□□ 0.7
USP44-202ENST00000393091 IQGAP1P46940 1657 aa19.45■□□□□ 0.7
USP44-202ENST00000393091 PRAG1Q86YV5 1406 aa19.42■□□□□ 0.7
USP44-202ENST00000393091 FOXD1Q16676 465 aa19.42■□□□□ 0.7
USP44-202ENST00000393091 SCAF11Q99590 1463 aaKnown RBP19.4■□□□□ 0.7
USP44-202ENST00000393091 THEMISQ8N1K5 641 aaPredicted RBP19.4■□□□□ 0.7
USP44-202ENST00000393091 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
USP44-202ENST00000393091 KNDC1Q76NI1 1749 aa19.39■□□□□ 0.69
USP44-202ENST00000393091 PLEKHG1Q9ULL1 1385 aa19.39■□□□□ 0.69
USP44-202ENST00000393091 TRPM1Q7Z4N2 1603 aa19.38■□□□□ 0.69
USP44-202ENST00000393091 PIK3C2GO75747 1445 aa19.37■□□□□ 0.69
USP44-202ENST00000393091 NWD1Q149M9 1564 aa19.37■□□□□ 0.69
USP44-202ENST00000393091 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.36■□□□□ 0.69
USP44-202ENST00000393091 CHD2O14647 1828 aaKnown RBP19.34■□□□□ 0.69
USP44-202ENST00000393091 HDGFP51858 240 aaKnown RBP19.32■□□□□ 0.68
USP44-202ENST00000393091 XRN1Q8IZH2 1706 aaKnown RBP19.32■□□□□ 0.68
USP44-202ENST00000393091 ALKQ9UM73 1620 aa19.32■□□□□ 0.68
USP44-202ENST00000393091 ADGRB1O14514 1584 aa19.3■□□□□ 0.68
USP44-202ENST00000393091 PIK3R4Q99570 1358 aa19.3■□□□□ 0.68
USP44-202ENST00000393091 ADAMTS13Q76LX8 1427 aa19.29■□□□□ 0.68
USP44-202ENST00000393091 NPHP4O75161 1426 aaPredicted RBP19.29■□□□□ 0.68
USP44-202ENST00000393091 ASXL1Q8IXJ9 1541 aa19.27■□□□□ 0.68
USP44-202ENST00000393091 VGFO15240 615 aaPredicted RBP19.27■□□□□ 0.67
USP44-202ENST00000393091 RALGAPBQ86X10 1494 aa19.26■□□□□ 0.67
USP44-202ENST00000393091 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
USP44-202ENST00000393091 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
USP44-202ENST00000393091 GPRASP1Q5JY77 1395 aa19.25■□□□□ 0.67
USP44-202ENST00000393091 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
USP44-202ENST00000393091 CPS1P31327 1500 aa19.24■□□□□ 0.67
USP44-202ENST00000393091 LTKP29376 864 aa19.24■□□□□ 0.67
USP44-202ENST00000393091 CCER1Q8TC90 406 aaPredicted RBP19.24■□□□□ 0.67
USP44-202ENST00000393091 STRCP1A6NGW2 1772 aa19.23■□□□□ 0.67
USP44-202ENST00000393091 TECPR2O15040 1411 aa19.23■□□□□ 0.67
USP44-202ENST00000393091 EID1Q9Y6B2 187 aa19.22■□□□□ 0.67
USP44-202ENST00000393091 TONSLQ96HA7 1378 aa19.21■□□□□ 0.67
USP44-202ENST00000393091 L3MBTL2Q969R5 705 aa19.21■□□□□ 0.67
USP44-202ENST00000393091 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
USP44-202ENST00000393091 TBX22Q9Y458 520 aa19.2■□□□□ 0.66
USP44-202ENST00000393091 STAG3Q9UJ98 1225 aa19.2■□□□□ 0.66
USP44-202ENST00000393091 NKTRP30414 1462 aaKnown RBP19.19■□□□□ 0.66
USP44-202ENST00000393091 C14orf93Q9H972 538 aaKnown RBP19.19■□□□□ 0.66
USP44-202ENST00000393091 TXNDC2Q86VQ3 553 aa19.18■□□□□ 0.66
USP44-202ENST00000393091 DMRT2Q9Y5R5 561 aa19.18■□□□□ 0.66
USP44-202ENST00000393091 ADGRF5Q8IZF2 1346 aa19.18■□□□□ 0.66
USP44-202ENST00000393091 XIRP1Q702N8 1843 aaKnown RBP19.17■□□□□ 0.66
USP44-202ENST00000393091 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
USP44-202ENST00000393091 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
USP44-202ENST00000393091 LTBP4Q8N2S1 1624 aa19.15■□□□□ 0.66
USP44-202ENST00000393091 ZNF326Q5BKZ1 582 aaKnown RBP19.15■□□□□ 0.66
USP44-202ENST00000393091 NCOA3Q9Y6Q9 1424 aa19.15■□□□□ 0.66
USP44-202ENST00000393091 SIRT1Q96EB6 747 aa19.15■□□□□ 0.66
USP44-202ENST00000393091 ADGRB2O60241 1585 aa19.14■□□□□ 0.66
USP44-202ENST00000393091 IQSEC2Q5JU85 1478 aa19.14■□□□□ 0.65
USP44-202ENST00000393091 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
USP44-202ENST00000393091 DCAF11Q8TEB1 546 aa19.13■□□□□ 0.65
USP44-202ENST00000393091 NCKAP5LQ9HCH0 1330 aa19.13■□□□□ 0.65
USP44-202ENST00000393091 FAM135BQ49AJ0 1406 aa19.12■□□□□ 0.65
USP44-202ENST00000393091 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
USP44-202ENST00000393091 LRPPRCP42704 1394 aaKnown RBP19.12■□□□□ 0.65
USP44-202ENST00000393091 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
USP44-202ENST00000393091 PTPRUQ92729 1446 aa19.12■□□□□ 0.65
USP44-202ENST00000393091 ABCC11Q96J66 1382 aa19.11■□□□□ 0.65
USP44-202ENST00000393091 RGL3Q3MIN7 710 aa19.1■□□□□ 0.65
USP44-202ENST00000393091 NEUROD1Q13562 356 aa19.1■□□□□ 0.65
USP44-202ENST00000393091 HSPA2P54652 639 aa19.09■□□□□ 0.65
USP44-202ENST00000393091 YTHDC2Q9H6S0 1430 aaKnown RBP19.08■□□□□ 0.65
USP44-202ENST00000393091 METP08581 1390 aa19.08■□□□□ 0.64
USP44-202ENST00000393091 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.64
USP44-202ENST00000393091 NBPF8Q3BBV2 869 aa19.07■□□□□ 0.64
USP44-202ENST00000393091 QRICH2Q9H0J4 1663 aa19.06■□□□□ 0.64
USP44-202ENST00000393091 NALCNQ8IZF0 1738 aa19.05■□□□□ 0.64
USP44-202ENST00000393091 KCNA6P17658 529 aa19.03■□□□□ 0.64
USP44-202ENST00000393091 SBNO2Q9Y2G9 1366 aa19.03■□□□□ 0.64
USP44-202ENST00000393091 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.03■□□□□ 0.64
USP44-202ENST00000393091 CDC42BPGQ6DT37 1551 aa19.02■□□□□ 0.64
USP44-202ENST00000393091 LRRC7Q96NW7 1537 aa19.01■□□□□ 0.63
USP44-202ENST00000393091 DCCP43146 1447 aa19■□□□□ 0.63
USP44-202ENST00000393091 FMN2Q9NZ56 1722 aa19■□□□□ 0.63
USP44-202ENST00000393091 CFAP70Q5T0N1 1121 aa18.99■□□□□ 0.63
USP44-202ENST00000393091 ROCK2O75116 1388 aaKnown RBP18.97■□□□□ 0.63
USP44-202ENST00000393091 TOPAZ1Q8N9V7 1692 aa18.97■□□□□ 0.63
USP44-202ENST00000393091 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
USP44-202ENST00000393091 NUTM2DQ5VT03 806 aaPredicted RBP18.95■□□□□ 0.62
USP44-202ENST00000393091 EIF3AQ14152 1382 aaKnown RBP18.95■□□□□ 0.62
USP44-202ENST00000393091 ROBO2Q9HCK4 1378 aa18.94■□□□□ 0.62
USP44-202ENST00000393091 ITSN1Q15811 1721 aa18.93■□□□□ 0.62
USP44-202ENST00000393091 ADGRL3Q9HAR2 1447 aa18.93■□□□□ 0.62
USP44-202ENST00000393091 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
USP44-202ENST00000393091 SLC26A8Q96RN1 970 aa18.92■□□□□ 0.62
USP44-202ENST00000393091 AMOTL2Q9Y2J4 779 aa18.91■□□□□ 0.62
USP44-202ENST00000393091 USP32Q8NFA0 1604 aa18.9■□□□□ 0.62
USP44-202ENST00000393091 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.62
USP44-202ENST00000393091 SLC24A1O60721 1099 aa18.89■□□□□ 0.61
USP44-202ENST00000393091 TULP4Q9NRJ4 1543 aa18.89■□□□□ 0.61
USP44-202ENST00000393091 KIF1AQ12756 1690 aa18.87■□□□□ 0.61
USP44-202ENST00000393091 USP47Q96K76 1375 aa18.86■□□□□ 0.61
USP44-202ENST00000393091 ZNF335Q9H4Z2 1342 aaPredicted RBP18.86■□□□□ 0.61
USP44-202ENST00000393091 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms